KEGG   Penaeus chinensis (fleshy prawn): 125028173
Entry
125028173         CDS       T08118                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03030  DNA replication
pchn03410  Base excision repair
pchn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125028173
   03410 Base excision repair
    125028173
   03420 Nucleotide excision repair
    125028173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pchn03032]
    125028173
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125028173
Enzymes [BR:pchn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125028173
DNA replication proteins [BR:pchn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    125028173
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      125028173
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 125028173
NCBI-ProteinID: XP_047473513
LinkDB
Position
8:39788797..39808237
AA seq 2271 aa
MVLQNSGKYRSERFERKKDDDPSALDDGSDRRLQQSIENDNVDSKYGFNRYKEPQERVGW
LLNMHPTEILDEDKRLMSAVDYYFIQEDGSRFKVSLPYRPYFFVMTKKEVIQDVTTFLTK
KFAGLLASVEVVRKEDLDLDNHLTGLKQTLLKLSFLTVNDLVKVRQTISGAVKRNKEAAK
SKTVYAEMLLAHASESGESGKKMDHFENLLDIREYDVPYHVRVSIDCKIFVGLWYSVRGG
GTGPPIITRREDLLVWPDCIVLAYDIETTKLPLKFPDANTDQIMMISYMIDGQGYLITNR
EIISEDVEDFEYTPRAEFEGPFIIFNEANEMATIQRFFDHILEVKPHIFVTYNGDFFDWP
FVEARAAFHNLDMFREIGFSKTREGVYFSRPAIHMDCLCWVKRDSYLPVGSQGLKAVAKA
KLRYDPVELDPEDMCSLAAEQPQVLANYSVSDAVATYYLYMKYVHPFIVALCTIIPMEPD
EVLRKGSGTLCEALLMVQAYHANIVYPNKKVAELNKLSSDGHVIDSETYVGGHVEAIESG
VFRADIPCRFRMVPEAFQKLIDNVDRTIKFCVEVEEGIPLDQVINYDEVVEDIKTKLADL
RDTPCRLENPLIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACDFNKPGATCQRKMSWI
WRGDMIPASRSEYQRIQQQLETERFPPAQPGWNHRAFHELNKEEQALAEKKRLQEYCRKA
YKKIKETRTEERWQTICQRENSFYVNTVRSFRDRRYEYKGLLKVAKKQLTEAQEKGDPGE
VKSANARAVLYDSLQLAHKCILNSFYGYVMRKGSRWHSMEMAGIVCYTGATIITRSREIV
EQIGRPLELDTDGIWCILPASFPENYVIKTNNPKKSKVTISYPGAILNVMVKDHYTNHQY
HDLQNPEILEYSVRSENSIFFEVDGPYQAMILPASKEEGKKLKKRYAVFNFDGSLAELKG
FEVKRRGELQLIKIFQSSVFEAFLKGDTLETCYASVAKVADYWLDVLYSKAANMPDSELF
DLISENRSMSRKLDEYGDQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGAPVT
ERAIPLAIFQAEPSVKHHYLRRWLKDPSVSNFDIRNVLDWEYYIERLSGTVMKIITIPAA
LQGVPNPVPRVAHPDWLHKKVLERNDTFKQRRITDMFNLAPKPKPQPKVQTEDDNSQDLF
ASQAAPDIEDILAPQSQNPRVGPTVTSNKRKRTSDITEDSNDMTKSWRDVLGNPPSMGNS
KEEMAAWITFQKKKWEFQRLQRESRSKRLRTRDCPTMGTSVGSGAGRVVRSGPTSTLGGF
LRKAQRTLLDVPWQLIQLAETNTAGQFKLWALVGNDLHLIKLVIPRIFYVNQRVPKLANE
SEGVWRKANKTLPRSHPVFNLYEYTVPEEVFREHSNELMADLSTPDIEGIYETQVPLDFR
AVAQLGCVCVVDKFLARADTDTFELGQLKFKTVAQYQYLETGSLHHVYLYHHRSGNKAMF
GVFFNHSKKGHIFVLDTVRSNQMPNLNSLFNNERNAKISKGFEEVQLPESNYTFEIKFET
ELRPVHRQIQRLLQAYREEKKGPTFLAIQSPHDLTTITTLMPGLGEFPQVPIHVTEVENL
YNVLDWQRVGAKAMLRQYLGLKQLLHTAMEQSRYFHVPVGNLPRDTTAFGADLFYFRHLQ
KHNSVVWCSPGQRPDLGGHEHDDNRLVAELEEAASVAQINNPGCYSTVCVELDLDALAVT
TLLQSHHINEMEGTSSSVAFDAAPQASLQDMMGGAESSLTSYDETARCASAFRILRQMVA
AWLRDVSLYQNVFADFQIIHFYRWLRDSGSLLYDPALHRILHNLMHKLFLHLVAEFKRLG
SVIVYANFNKIVLCTKKRRVDDAISYVQYVVNSIRGKELFHSVDISFNQCWEYLMWLDPA
NHGGIKGKLPKDISSSQDEKGNESEDDDEENQQGTENEGERGEDEGPVIEMNWNMAEYLP
EWCGCQSSFNNVVASYMNAVYEKLQEESGRYTPGNTPVKRKVSSQATRKPQEALQGYVDF
AQELISGELAQKLYFITQKIQKKGTREEEDEDQNVLVVAPDIHTTPALEFVKSITKVLSL
DPVVSEQVCKLRRDLLKLLNIGEFSPEAEWKDPCISYTLPEVICRSCNHCRNIDLCKDPH
HAVENGVRVWLCPVCNTSYASGEIEHYLIGLIHTNSMAYVLQDLQCDRCSEVKQPNMTLY
CTCGGRFKTLHKRDDFSHKLRIFKKIASYFSMPLLKETVEWIISNNSWIKQ
NT seq 6816 nt   +upstreamnt  +downstreamnt
atggtgcttcagaattcaggaaaataccggtcagagagatttgagaggaaaaaggacgac
gatccgagtgccctagatgatggttccgacagaaggctccagcagagcattgagaatgat
aacgttgattccaaatatggattcaaccgctacaaggagcctcaggagcgggtgggatgg
ctcctcaacatgcatcctacggaaattctggacgaggacaagaggcttatgagtgctgtt
gattattactttatacaagaagatggatccagatttaaggtctctctcccatatcggccg
tacttcttcgtaatgaccaaaaaggaggtgatccaagatgttacaacgttcttgactaaa
aagtttgctggtcttttggcctctgtggaagttgtcaggaaggaggacttggatttggat
aatcacttgacaggcttgaagcagacattgttgaaattatcatttctcactgtaaatgac
ttggtaaaggtacgtcaaacgatttctggagctgtaaaaagaaataaagaagcagccaag
tctaagacagtgtatgcagagatgttgttagctcatgcaagtgaatcaggggaatcaggg
aaaaagatggatcattttgaaaatcttcttgatattagggaatatgatgtaccataccat
gtgagagtatcaattgactgcaagatttttgtgggattatggtactctgtcagaggtggg
ggtacaggccctcccattataacacgccgtgaagatctgctggtgtggcctgattgtatt
gtacttgcttatgatattgagaccacaaaactgcctctcaagttccctgatgcaaatacc
gatcagattatgatgatatcgtacatgatcgatggacagggttatcttataacaaataga
gaaattattagtgaggatgtggaagactttgagtatacaccacgagcagagtttgagggt
ccattcattatttttaatgaagccaatgaaatggctactatccagagattctttgatcat
attctagaggtgaagcctcatatatttgtgacctacaacggagacttctttgactggccg
tttgtggaagctcgagcagcattccataacttagacatgttcagagaaattggattctcc
aagaccagagagggagtctacttttcacgtcctgcgatccacatggattgcctttgctgg
gtaaagagagattcctacttgcctgttggttcacaaggcttgaaagctgttgccaaagcc
aagctgcgatatgatccagttgaattagatccggaagatatgtgttcattagcggctgaa
caaccacaggttctggccaattactcagtgtcagatgcggtggccacatactacttgtac
atgaaatatgtccaccccttcattgtggctctgtgtaccattattcccatggagccagat
gaggttctccgtaaaggctctggaacgctgtgtgaagctctgttgatggtgcaggcttac
catgccaacattgtttatccaaataagaaagtcgcagagctgaataaactttcatccgat
ggccatgtgattgactccgaaacttacgttggagggcatgtagaagccattgagtcagga
gtgttccgtgctgatattccttgcagatttcgaatggttccagaagctttccagaagtta
atagacaatgtggaccgcactataaaattctgcgttgaagtggaagaaggcattccttta
gatcaagtgatcaattatgatgaggttgttgaagatatcaagacaaagttagccgacttg
cgggacactccatgccgtttagagaaccctctgatctaccatcttgatgtaggagctatg
tatcctaacattatcctcacaaatcgactccagccttctgctatggtggatgaaactgtt
tgtgccgcctgtgattttaacaaacctggagcaacgtgtcagagaaagatgtcatggatc
tggagaggagacatgatcccagcctcccgtagtgaatatcaacgcatccagcagcagtta
gagacagagagatttccaccagctcagcccgggtggaaccacagagctttccatgagctt
aacaaagaggagcaagctctagcagagaagaaaaggctgcaggaatattgccgtaaagct
tacaaaaaaataaaagaaacaagaacagaagaacgttggcagacgatttgtcagcgagaa
aacagcttttatgtcaacacagtgaggtctttccgagatcgtcgttatgagtacaaaggt
cttctgaaggtagcaaagaaacagttaactgaggcacaagaaaagggagatccaggtgaa
gtcaaaagtgccaatgctcgtgctgtgttgtatgactccttgcagttggctcacaagtgt
atccttaactccttctatggttacgtcatgagaaagggctctcggtggcactcaatggag
atggctggaattgtgtgttatactggagctaccattattactaggtcaagggaaattgtg
gaacagattggtcggcccttggaacttgacaccgacggtatctggtgcattctcccagca
tcattccctgagaattatgtcatcaaaacaaacaaccctaagaagtcaaaggttaccatc
tcatacccaggtgccattcttaatgtaatggtgaaggatcactacacaaatcaccagtac
catgatctccaaaatcctgagatactggaatactctgttagatcagaaaattccattttc
tttgaggttgacggtccctaccaagcaatgattcttccagcttccaaagaggagggcaaa
aagcttaaaaaacgttatgcagtgttcaactttgatggctcattggcagaattgaaaggc
tttgaagtgaagcgtcgtggagaactgcagctcattaagattttccagtcctcggtgttt
gaagctttcctgaaaggagacacactggaaacctgttatgcaagtgttgcaaaggtagca
gactattggctggatgtgctgtacagtaaagcagccaacatgcctgactccgaactgttt
gatctcatttcggagaatcgttcaatgagcaggaaattggacgagtatggggaccagaag
tcgacctccatttcaacagctaagaggctggcagagttccttggtgatcagatggtgaag
gatgctggtctcagctgcagattcatcatttcaaagaaaccagaaggagcccctgttact
gaaagagctattccacttgccatcttccaagcagaaccatcggtgaaacatcactatctg
cgtcgctggctaaaagatccatctgtctcaaactttgacattcgaaatgttttggattgg
gaatactacattgaaagactctcaggaacagtaatgaagatcattacaatcccagctgcc
cttcagggtgtgccaaatccagtacctcgtgtagcccatcctgactggttgcataaaaag
gttctggagagaaatgacacttttaagcagcgccgcattacagacatgtttaatttagcc
ccaaaaccgaaacctcagcccaaggttcagactgaggatgacaattcgcaagatttgttt
gcatcacaagcagcccctgatattgaagacatactggctccacaatcacaaaatccacgg
gtaggaccaacagtcacaagtaacaagcggaagaggacctcagacattactgaagatagt
aatgatatgacaaagagttggagagatgtcttgggaaacccaccaagtatgggaaattca
aaggaggaaatggcagcatggattacattccaaaagaaaaaatgggagttccaacggctc
cagagagaaagccgatcaaagagacttcgcaccagagattgcccaacaatgggtacaagt
gtggggagtggtgctggccgtgtggtgaggtctggcccaactagtacccttgggggcttc
ttgcgcaaggcacaacgcactctactagatgtcccttggcagcttatacaactagcagag
actaatacagcaggacagtttaaactgtgggcactggttggcaatgatctccatctcatc
aagcttgttattccccgaatcttctatgttaaccagcgtgtacccaaattagctaatgag
tcggagggagtgtggcgcaaagcaaacaagactctccccaggtcacatccagtgtttaat
ctgtatgaatacactgtcccagaggaagttttccgtgagcacagtaatgaacttatggct
gatttgtcaactcctgatattgaaggaatctatgaaactcaggttccactggattttagg
gcagtagctcaacttggctgcgtatgtgtggttgataaattcctagctcgtgcagacact
gacacatttgaattgggtcaactcaagtttaaaacagtggcacaatatcagtacctagag
actggcagccttcatcatgtttacttatatcatcataggagtggaaataaggccatgttt
ggtgtattctttaatcacagtaagaaaggccacatttttgtgttagatactgtacgaagt
aatcagatgcccaatcttaattccctgtttaacaatgagagaaatgccaagatcagcaaa
ggttttgaggaagtccaactcccagagtctaactacacctttgagataaagtttgagact
gagctgcgtccagttcatcgccagattcagcgtctacttcaagcatatagagaagagaag
aaagggccaacttttctggccattcaatctcctcatgatcttaccacaataacaactctt
atgcctggcttgggagaatttccacaggtgcccattcatgtcacagaagttgaaaacttg
tacaatgtacttgactggcaacgtgttggtgcaaaagccatgttgcgacagtacctgggc
ttaaagcagttactacacacagccatggaacagtctcgttactttcatgtccctgttgga
aatttgccacgagataccacagcctttggggcagatctgttttacttcagacatctgcag
aagcacaactcagttgtatggtgttcacctggccaaaggcctgatctgggcggtcatgag
catgatgacaatcgacttgtagcagaattggaagaagctgcctcagttgcacagattaac
aacccagggtgttattctacagtctgtgtagaactggatttagatgctttggctgtcact
acattgttacagtcacatcacatcaatgagatggaagggaccagcagtagcgtagccttt
gatgctgctccacaggcttcacttcaggatatgatggggggtgctgagtcctctctcaca
tcctatgatgaaactgctcgttgtgcctcagccttcagaatattaagacagatggtagct
gcttggctccgggatgtttcactctaccagaacgtgtttgctgatttccagatcatccac
ttttatcgatggctgagagattctgggtccctcctgtacgatcctgcgcttcatcgcatc
ctacacaatctaatgcacaagctattcctccatctggttgcagaatttaagcgtttaggc
tctgtcattgtttatgccaacttcaacaaaattgttctctgcactaagaaaagaagggta
gatgatgccatatcgtatgtgcaatatgtggtaaacagcatcaggggcaaggaattattc
cattctgttgacatatccttcaaccagtgctgggaatacctcatgtggttagaccctgca
aatcatggtggtattaaaggtaagcttccaaaggacatttcttcttcacaagatgagaaa
ggtaatgaatcagaagatgatgatgaagagaaccaacaggggactgaaaatgaaggtgaa
agaggagaagatgaaggaccagtgatagagatgaactggaatatggctgagtacctccca
gaatggtgtggatgccagagcagcttcaacaatgtggtggcctcgtacatgaatgcagtg
tatgagaaactgcaagaagaaagtggtcgatacacaccaggcaacacccctgtgaagcgt
aaagtttcaagccaggccacgagaaagccgcaagaggcacttcagggctacgtagacttc
gcccaagaactaatttccggagaattagcacaaaagttatatttcattacacaaaagata
cagaagaagggaacaagagaagaggaagacgaggatcagaatgtcctcgtggtagctcct
gacattcacacgactccagctttagagttcgtcaaaagcatcaccaaagtcttgtccctg
gatcctgttgtttcagaacaggtgtgcaaacttaggagagaccttctgaagttattgaac
ataggcgagttttccccagaggcagaatggaaagacccttgtatctcgtacactctacct
gaagtgatttgcagatcttgtaaccattgcagaaatattgatctctgtaaagatccacac
cacgcagttgaaaatggagtgcgagtctggttatgtcctgtttgcaacacaagctatgct
tcaggtgaaattgaacattatttgattggcctgatccatacaaattctatggcatatgtg
cttcaagatcttcagtgtgatcgttgttcagaggtgaagcagcccaatatgaccctctac
tgtacatgtggagggcgcttcaagacactccacaagcgtgatgattttagccacaaatta
agaatattcaagaagatagcatcatatttctcaatgccattactgaaagaaactgttgaa
tggattatctccaataattcatggataaaacagtaa

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