Penaeus chinensis (fleshy prawn): 125028293
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Entry
125028293 CDS
T08118
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125028293
Enzymes [BR:
pchn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125028293
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125028293
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
125028293
NCBI-ProteinID:
XP_047473694
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Position
8:complement(23016888..23035414)
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AA seq
608 aa
AA seq
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MSVRILSWNINGLRSFKTNMKQLLDSLEADIICFQETKVTRDMLEEPFAIVEGYSSYFNF
SKKKSGYSGVATFCSNQASPTHAQEGLTGKHAGELFDGGGTIEVLAGQWQEEELKNLDSE
GRAVITQHLMRGTEGKELRIAVINVYCPHVDPEKPERRIYKLRFYELLRQRAAAIRATGC
HVIIVGDINTSHRRIDHCDPDDTEDFESRLGRRYLNMMLLPIYKNEQQNETSGTDQKAGV
ESAQNNHVCSSQLGKIDELNKINDGLKLAKNSSCSLTEGNDYSRAELNSKTGEEGGYGGE
QQSDEALLSSSTNFQMVDTFRYFYPLKEKAFTCWHTLSNSRATNYGTRIDYIFCDQDFLT
YLRDGQVLQEVLGSDHCPVAIVINGEITSAAKLPSSCTKFYPEFQGQQQKLSSYFQPKSS
STKANQNFTLQKTESTNKTWPQNGIKRKAEVFKKSASKMACTEKQKKLSSFFTVKQSSSV
DRENDKNENSIGQNHTDVNFAGHIDKEIKTDDSQNISSHELPLSQESNGNPVSGSQKPPT
QVKNTGWNFLMKGPKPPPLCPGHNEPAVLRTVRKKGPNMNRQFYACARGAGKEGDPEAQC
NFFKWVGK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttcgcatcctcagctggaatatcaacggattgcggtcattcaagacgaacatg
aagcaactcctggattctttagaggcagacatcatttgctttcaagagacaaaagtaacc
cgtgacatgctagaagaacctttcgctattgttgagggatattcatcttatttcaacttt
tccaagaagaaaagtggatattctggagtggccacgttttgctccaatcaagccagccct
actcatgctcaggaaggcctcacaggtaaacatgctggggaactttttgatggtggaggc
actattgaagttttagcagggcagtggcaagaggaggagctgaagaacttggacagtgag
ggacgagctgtcatcacacaacatcttatgaggggtacagaaggaaaagagttgagaata
gcagtcataaatgtatactgcccacatgtagaccctgagaaaccagagcgtcgcatctat
aaattaagattctatgaattgctacggcaaagggcagctgccatcagagctactggctgt
catgttattatagtaggggatatcaacacttctcacagaagaattgatcactgtgatcct
gatgacactgaggattttgagagtcgtctaggcagaagataccttaatatgatgctcctg
cccatatacaaaaatgagcagcagaatgaaactagtggcactgatcaaaaagcaggagtt
gaatctgcccaaaataatcatgtgtgtagttctcagctcggcaagattgatgagttgaac
aaaattaatgatgggctcaaattagctaagaacagttcctgtagcctcactgaaggaaat
gattactcaagagcagaattgaatagcaaaacaggagaagaaggaggatatgggggtgag
cagcagtctgatgaagctctactttcttcaagcactaacttccaaatggttgatacattc
cgatacttttacccactgaaggagaaagcttttacttgttggcataccctctcaaattct
agagctacaaattatgggactagaattgactacattttttgtgatcaagattttttgaca
tatttaagagatgggcaggtcctgcaggaagttttggggagtgatcactgccctgttgcc
attgtaataaatggggaaataacttcagctgctaaactaccttcatcatgcactaaattc
tatccagaatttcagggccagcagcagaaattgtcatcatactttcagcctaaatcttcc
agtacaaaggctaaccagaacttcactttgcaaaaaactgaaagtacaaataaaacttgg
cctcagaatgggatcaaaagaaaagctgaagtttttaagaaatcagccagtaagatggca
tgcacagaaaaacaaaagaagctaagctcgttctttactgttaaacagagttcctcagtt
gatagagaaaatgataaaaatgaaaattcaataggtcaaaatcatactgatgtgaatttt
gcaggtcatatcgataaggaaataaaaactgatgattcccagaacatctcatctcacgaa
ttacctttgtcacaagaaagtaatggaaacccagttagtggatcacagaaacctcccact
caggtgaaaaacacaggttggaatttcttgatgaaaggcccaaagccccctcctctttgt
ccagggcataatgagccagctgttttaagaactgttagaaagaagggaccaaatatgaat
cgtcagttttatgcttgtgcaagaggagcaggaaaagaaggagacccagaggctcagtgt
aattttttcaaatgggttgggaagtag
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