Penaeus chinensis (fleshy prawn): 125028760
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Entry
125028760 CDS
T08118
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
pchn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125028760
03015 mRNA surveillance pathway
125028760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125028760
03041 Spliceosome [BR:
pchn03041
]
125028760
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125028760
Spliceosome [BR:
pchn03041
]
Complex C
Other components
EJC/TREX
125028760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
125028760
NCBI-ProteinID:
XP_047474197
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Position
9:36378767..36392277
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AA seq
873 aa
AA seq
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MAPGVTGTSLVDAIETEIERAKQDLKGVDENLRKLTGRDFNDPNQRGEQRRVRLSSGGRD
EEPPAKRRPPGGVFARLGGVVQEQQHVDHRAKPRDFRGEHRPTPDLRGDLRAEIHGDLRG
RRVQEVAEEDEKMPKPSLPSSVARPQADMKSRTEAAAELTKDRASRDRNRRMFGALLGTL
KRFKNDEAKQKDKEEQRAAIERKLEEKGRVEKEELRRERLELINQRQERKAQIKRLTVKM
ARVKEHEQWEAHQMKLTRFIRTKSMPSIFWIPRTHTAKTTSLVRASHDNIMKELEEDRLR
MKEELEEILGSRAEDDQGEMGRDGAEGGEEEEEETYVHRGVRSAVARQGEGGVSTSLDNC
PDLLDYEAEEGELVYGEADLSGKDDDDTERMVVQVDGRGEGARKVEIVASQSEEGTSGLE
RESKGNDSEKENEGKLSDGSRERERDRHNREKDKSKEGEDTGKNREVQTIYNKETELEAT
VVHVKIEKDDDDESGPKASEAALKKVKEEKPDKAPSSTADKTDVEEASVPTELPPLPPAS
TLPQPPTTTAPPSPPPAVPAPSEEEQKESQTEEPERMEESSSHNKDDESSAMSRSPTSGK
DPPPTESKNTQDKNDKEGEAEVGKKSSSKSRHNNSSSEDSSITTSSSDSSDSGSSDSESS
STSSGSSSGSSSDSESDSSGTTSSGSDSESDKERRKRKRHLKLINLQSVAVCRAKAPKPY
EPGIQLDDERLALWQPEQPLGSMDTIFPDGLGCVSSPHSSGSPWPITASSHLSSVYSFPH
KKTFISQTILPNSLPEILEDIQYRTQENVPLPHPPFSLFPITSTIKKLVISPSEYPLQDD
TIAWLVPFLPDFGPSMQIPILTEPVLVQPMFCG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgggcgtgacgggaacctctctcgttgacgccatagaaacggaaatagagagg
gcgaagcaggacttaaaaggcgtcgatgagaacttgaggaagttaacaggcagggatttt
aatgacccgaaccagcgtggagagcagcggagagtacgcctatcctctggtgggagagat
gaagagcccccagccaagcgaagacccccagggggggtctttgccaggctgggaggtgtg
gtgcaagaacagcagcatgttgaccacagagcgaagccccgagattttcgcggggagcac
cgtcccactccagacttgaggggagacttgcgggcggaaatccatggggatttgcgaggc
agacgagtgcaggaagtggctgaggaggatgagaagatgcctaagccatctctgccttcg
tctgtggctcgccctcaggcagacatgaagtcccgcacagaagctgcagcagagcttacc
aaggatagagcttctcgggacaggaaccgccgcatgtttggtgctctacttggtactctc
aagaggttcaagaatgatgaagcaaagcagaaagataaggaagaacagcgcgctgccatt
gagaggaagctggaagaaaagggtcgcgtggaaaaggaagagctgcgccgagaacgacta
gagctgatcaaccagaggcaggagaggaaggcacagattaagcgtctcactgttaagatg
gcccgtgtgaaggagcacgagcagtgggaggcacaccagatgaaattaaccagattcata
agaaccaagtcgatgccctccatcttttggatccctcgaacccacactgccaagaccact
agcctcgtgcgagcctcacacgataacatcatgaaggaactcgaagaggaccgtctccgg
atgaaggaagagctggaggagatactagggtcacgtgcggaggatgatcagggcgagatg
ggcagggatggcgcagaggggggggaggaggaggaggaggagacctacgtgcacaggggg
gtccgctcagccgtcgccaggcagggggaggggggtgtcagtacctctcttgataactgt
cctgatttgttagattacgaggctgaggagggagagctagtatatggtgaggcagacctg
tcaggtaaggatgatgacgacactgagcgtatggtagtccaggtcgacggcaggggagaa
ggtgctcgaaaggtagaaattgtagctagccagtcagaggaaggaacatcaggtttagag
agagagagtaagggcaatgatagtgagaaagagaatgaaggtaaactaagtgatgggagc
agggagagagagagggataggcacaatagggagaaagataagagtaaggaaggggaggac
acaggcaagaacagagaagtacagaccatctacaataaagagacggagctggaggccacg
gttgtgcatgtcaaaatagagaaagacgacgatgacgaatcagggcccaaggcctctgag
gctgcgctcaagaaagtcaaggaggagaaacctgacaaggcaccctcaagcacagctgac
aagactgatgtggaggaggcttccgtccccaccgaattaccccccttacctcctgcatcc
acattgccacagcctccaaccactactgctccaccttcccctcctcctgcagtccctgca
cctagtgaggaggagcaaaaggaaagccaaacagaagaacctgagagaatggaggagagc
agcagccacaataaagatgatgaatcatctgccatgtcccgcagtccaacaagtgggaaa
gatccacctcccacagagagtaaaaacacacaggataagaatgacaaggaaggggaagca
gaggtaggtaaaaaatcttcatccaagtccagacataacaatagcagtagtgaagacagc
agtatcactactagtagcagcgatagtagtgatagtggtagctcagattcagagagctcg
tcaacaagctctgggtcatcctctgggtcttcatctgactcggagagcgactccagcggc
accaccagctcaggcagtgactctgagtcggacaaggagagaaggaagagaaagcgtcat
ctcaaactgatcaatctgcagagtgtagctgtatgccgcgccaaagcgccaaagccctac
gagccaggcattcagcttgatgatgaaaggctggctttgtggcagcctgaacagcctctg
ggatccatggacactatattccctgatggtttgggctgtgtttcttccccacatagttca
ggctcaccatggccaatcactgcttcttctcatctgtcatctgtttattcttttcctcat
aagaaaaccttcatttcacaaaccattctacccaactcccttccagaaattcttgaggac
atccaatacaggacccaagagaatgttcctctccctcatccacccttcagtctcttcccc
attacttctacaatcaaaaagttggttatatctccaagtgaatatccactacaagatgat
acaatagcgtggctagttcctttcctccctgactttggccccagcatgcaaataccaata
cttactgaacctgtacttgtacagccaatgttctgtggttga
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