Penaeus chinensis (fleshy prawn): 125028949
Help
Entry
125028949 CDS
T08118
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125028949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125028949
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125028949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-RING-like
zf-HC5HC2H_2
zf-HC5HC2H
PHD_NSD
T5orf172
zf-RING_2
C1_1
Motif
Other DBs
NCBI-GeneID:
125028949
NCBI-ProteinID:
XP_047474555
LinkDB
All DBs
Position
9:26762295..26765762
Genome browser
AA seq
264 aa
AA seq
DB search
MADGEVVEDFYGVYLLYCINPQYKGRTYIGFTVDPNRRIKQHNKGVRAGGAYKTSNRGPW
EMVLIVHGFPNDISALRFEWAWQHPERSRRLRGMGRKKAKETKYEYCLRILATMLQTKPW
SRLPLTLRWLKQQYFKEFPAGMEAPNHMPIAYGPVKPAKVRKNEEEQEIEVLEVTCLLCD
DAVTQTERMRCLSTSCQLNAHVRCLAQHMLRGEPPGTLLPLEGPCPSCGSVLLWGDLVRL
KRGCYQQEEEEVEDHWVETLSQAV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggtgaagttgttgaagatttttatggagtttacttgttgtactgcataaat
ccacagtacaaaggacgtacatatattggctttactgttgaccccaatcgccgtatcaag
cagcacaacaaaggtgttagggcaggaggtgcatataaaaccagtaacagggggccatgg
gaaatggttcttattgtccatggatttccaaatgacatatctgcgctcagatttgaatgg
gcctggcagcatccagaaagaagtcgtcggttgagaggtatgggccgtaaaaaagcaaaa
gaaacaaaatatgaatattgtctacggattctggcaactatgttacaaactaaaccttgg
tctcgcctgcctcttacacttaggtggctcaaacaacagtacttcaaagaatttcctgca
gggatggaggcccccaatcacatgccaattgcttatggtccagtaaaacctgcaaaggtt
agaaagaatgaagaggaacaagaaattgaagttttggaggtgacatgcttgctgtgtgat
gatgcagtgacacaaacagaaaggatgagatgtttatctacctcttgtcaattaaatgct
catgtcagatgccttgcacaacatatgctacgtggagaaccaccagggactctgcttcct
ctagaaggcccatgtccaagctgtgggtctgtattgctatggggtgaccttgtaagactg
aagcgtggatgctatcagcaagaagaggaggaagtggaagatcattgggttgagacttta
agtcaggctgtataa
DBGET
integrated database retrieval system
