Penaeus chinensis (fleshy prawn): 125029617
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Entry
125029617 CDS
T08118
Name
(RefSeq) DNA-directed DNA/RNA polymerase mu-like isoform X1
KO
K03513
DNA polymerase mu [EC:
2.7.7.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125029617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125029617
Enzymes [BR:
pchn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125029617
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
125029617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
HHH_8
DNA_pol_B_palm
DNA_pol_lambd_f
BRCT
BRCT_2
LIG3_BRCT
NTP_transf_2
CLASP_N
PTCB-BRCT
DHX37_C
Motif
Other DBs
NCBI-GeneID:
125029617
NCBI-ProteinID:
XP_047475557
LinkDB
All DBs
Position
10:18691227..18698198
Genome browser
AA seq
544 aa
AA seq
DB search
MSCESKKRRHEEMEPVLDSVGEKPEAVLFLVQEGIQGKRFQLMKNFAAKNGFHCEDQLCE
RVTHVISELDNVKQIKKLYPQLSQNSHIKIVSSQWMYTCVRQKMHMPENNFLLEGYHQWL
VESLQDAQSSSKRSELGLQSESADSKQKLAKDNEELGHTEHDKKTFNENILERNAKLQNH
NMKLVESLTFMNNYWTVMGDERRALAYAKAAATIKCLPFTVTTMEQIEELKGLGTGHCLK
VVQEVLRTGTCREVTTKAESEKYIGLKNLTSVYGVGAGLAEKLYTVHNLRTVQDMITHWN
HLKLADERIKYGIAYHQDLNTPVTREDAGKIESILKEHLDVIKPGYTLEITGGFRRGKKT
GHDVDFLISYKKDGEEVGVLSKLLLSLTKKGHIIHQKVEKSTFDEEAVFRKASEKVNPMD
HFEKCFCIFRLPECEPWTSSDTLNMGRDFESLVKEGESKREWKAVRVDFVFVPSSQWGYA
LLGWTGSKLYMRLLRHYSNHYLNMLLNSHGLWNRADNTLLPAQNEEEVFQNLGLSYKEPC
DRNF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcgaatcaaaaaagcgaagacacgaggaaatggaacctgttcttgattctgtg
ggtgaaaaaccagaagcagttttgtttttagttcaagaaggcattcagggaaagcgattt
caactaatgaagaattttgctgcaaagaatggatttcactgtgaagatcagctgtgcgaa
agagtaactcatgttatatccgagctggataatgttaagcagattaagaagttataccca
cagctgtctcagaacagtcacattaagattgtttcatctcagtggatgtatacttgtgtt
cgacagaaaatgcatatgccggaaaacaatttcctattggaaggttatcaccagtggtta
gtggagagtctgcaagatgctcagagttcaagtaaaagaagtgaattgggattacaaagt
gaatcagcagacagcaaacagaaactggcaaaggataacgaggagctgggtcacacagag
catgataaaaagaccttcaatgagaatatccttgaacgaaatgctaaattacaaaaccat
aatatgaaattggtagagtcattaacatttatgaataattactggactgtcatgggtgat
gaaagaagagcactggcatatgctaaagctgcagccaccatcaaatgtcttccttttacc
gtcacgacaatggagcagattgaggagctgaaaggtttgggaactggacattgtcttaag
gtagtgcaagaggttctaagaactggaacttgtagagaggtcacaactaaagcagaatcg
gaaaagtatataggactaaagaacttgactagtgtgtatggtgttggtgcaggtcttgca
gagaagctttatacagttcataatttaagaactgttcaagatatgataactcattggaat
cacttgaaattagcagatgagaggatcaagtatggaattgcataccatcaagatctcaac
actccagtgacaagagaagatgctggaaagattgagtccattttaaaggaacacctggat
gtcatcaagccagggtatacacttgaaattactggtggatttaggagaggcaaaaaaact
gggcatgatgtggactttctgatctcttataagaaggatggggaagaagttggagttctt
tcaaagcttttgcttagcctcacaaagaagggacatattattcatcaaaaagtggaaaaa
tcaacttttgatgaagaggcagtattcaggaaagcgtcagagaaagtaaacccaatggat
cattttgagaaatgtttctgcatatttagactcccagagtgtgaaccttggacatcatct
gatacactgaatatggggagagactttgaaagccttgttaaggaaggtgaaagcaaaaga
gagtggaaggcagtcagagtagactttgtatttgttccatccagccagtggggctatgca
ctcctgggctggaccggtagcaagctatatatgcgtttgctgcgtcattattccaatcat
tatttaaatatgctgctcaacagccatggcctttggaacagggcagacaatacacttctc
cctgcccaaaatgaagaagaggtctttcaaaaccttggtttgagttataaggaaccatgt
gacagaaatttttaa
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integrated database retrieval system
