Penaeus chinensis (fleshy prawn): 125029621
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Entry
125029621 CDS
T08118
Name
(RefSeq) roundabout homolog 2-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125029621
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pchn04515
]
125029621
Cell adhesion molecules [BR:
pchn04515
]
Immunoglobulin superfamily
ROBO family
125029621
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Sp38
Pur_ac_phosph_N
Ig_4
V-set_CD47
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
125029621
NCBI-ProteinID:
XP_047475560
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Position
10:complement(18718648..18769028)
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AA seq
1167 aa
AA seq
DB search
MALLECVPPRGHPEPLVRWRRNGHVIKVQESHRHELVDEGSLMVKHVEQSDGGQYTCEAW
NLAGSKTTVPVNLYVHIKPNFLRGPKDTVTLTERKVEFECQVSGDPPPQVSWRRLRGPLP
EDRTEILDDHTLRIGRVTPGDEDTYVCEAVNVVGTARANATLTVYTAPEFLVRPQDVKAS
VGSSAAFECLAVGRPSPLVVWSRQDDHNLLLPRQDTPSGEPDDQPNVWVNAEGTLIVNQV
TRELAGWYSCAAVSAAGSLVARAFLDVPAPTLHPPPVISVRPRNLTVTPEAVALMVCQAE
GDPTPRVTWTKDGHHLREDDARITLLGSGTLQISDVREDDGGIYACTAASDAGKSSIAAH
LRVVPANSPAAARTTPAPDPRDLPGPPLPPTQRARNSTTLTLAWGPPEQEGASPITSYIL
EIWNGSGQWTALEEHIPAESYTLTGLKPNTQYRAVVRAMNMHGVSASSPVSGPLVTAGGG
RPGAEGAKETSNDPEIRAVLAHPLVTLMPPTPISSTAIRLQWKVQEFEDYMDGFYVRYRD
LNSGTHHFEMEAVTRSGAAHQASYTVSDLAKFTEYEFFIVPYHRNIHGHPSNSRIAVTLE
DVPSAPPSGVESLVLNASSVVLSWRPPPREHTNGRITKYSLWLFVNKTVPHSNLTLEGNL
HTLTLYNLTFGKHFSATVAAHTKAGQGPTSGGHTWLQDPSASSGSGEPKRVPSPLMAVLR
ETWFIGAVGAAGFLALSVFVAVVCYRRKRNEKRAMGGYKLDGRSVNGTMSGGLWIERGPW
GGSSGGATDDKSDATPEKLLNLNAVPGDYAEVDGPVAPLMPPGSQAPGTPVAYATTNIIK
ARNGEKVEPNIPVYGSMYGDNSMVGQADDNLVTYSTLKKQQLYKPTLSPALNAKQPHGVV
QRGYIPPWEQYAPPPLPENPPPEHPQQHLSPHAQFPNQHTQWRHQSPMVNRALNRQVFST
GSLPRHLNKVKASPIIPKRGVNTGDFDIAGDPLPPPPPPMEIPRTPPIRRDPNDPLPVTT
SVGLQGLQGLSGSRMMGAPGAPRLNRDYSPGRLPDMYGGSSIYQGPIDEEDESDCPYNEG
SAMYTDHSAVYESTSAFYGTMGDKAFDADRTNPLLIQQGNHISPQQSPQTHTLHQMNGLR
ERGAQFCLPPVSEAHKQPVTQSHPVSR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctggagtgcgtgccgccgcgaggtcacccggagccgctggtcaggtggcgc
aggaacggtcacgtcatcaaggtgcaggagtcgcataggcacgagctagtggacgagggc
tcgctcatggtgaagcacgtggagcagagtgacggcggccagtacacgtgcgaggcctgg
aacttagctggctccaagaccacggtgcctgtcaacctctatgtgcatatcaaacctaac
ttccttcgcggacccaaggacacggtgactctgacggagcgcaaagtcgagttcgagtgc
caggtgagcggcgaccctcccccgcaggtgtcctggcgtcgactgaggggcccgctgccc
gaagaccggaccgaaatcctcgacgatcatacgcttaggatcggccgcgtgacgcccggc
gacgaagacacctacgtgtgcgaggccgtcaacgtggtggggacggccagagcgaacgcc
acgctcaccgtctacaccgcgccggagttcctcgttcgaccgcaagacgtgaaggcctca
gtggggtcgtccgccgccttcgaatgcctggccgtgggtcgtccgtctccgctggtcgtc
tggagccgccaggatgaccataatctcctcctgccccgtcaggacacgccgtcaggagag
cccgatgaccagccgaacgtttgggtgaacgcggagggcacgctcatcgtcaaccaggtg
acccgagagctggcgggctggtactcgtgcgccgccgtgtccgccgcggggtcgctggtc
gcgcgggcgttcctggacgtgcccgcgcccacgctgcacccgccgcccgtcatctccgtg
cggccgagaaacctgacggtgacacccgaggccgtggcgctgatggtgtgccaggccgag
ggtgaccccacgccgagagtcacttggaccaaggacggccaccacctccgcgaggacgac
gccaggatcacgctgctcggctccggcacgctgcagatcagcgacgtccgcgaagacgac
ggcggcatctacgcctgcacggccgcctccgacgccggcaagtcctccatcgccgcccac
ctgagggtcgtccctgccaacagccccgccgccgcccgcaccacgcccgcgcctgaccct
cgcgatctccctggcccgcccttgccgccaacccagcgcgcccggaactccaccacgttg
accctggcgtgggggccgccggagcaggagggggcgtcgcccattacgagttatattctc
gagatttggaacggttcgggccaatggactgccttggaggaacacatcccagccgagtcc
tacacccttactggcctcaaacccaacacgcagtacagagccgttgtgagggccatgaac
atgcacggtgtctccgcgtcgtcccccgtgtccggccccctggtgacggccgggggaggg
aggccgggcgctgaaggggccaaggagacgagcaacgaccccgagataagggccgtcctc
gcccaccctctcgtcacactcatgccgcccacgcccatctcgtccaccgcgatcagacta
cagtggaaggtccaagaattcgaagactacatggacggcttctacgtacgttaccgtgac
ctgaactccggcacgcaccacttcgagatggaggccgtgacccgatctggcgccgcccac
caggcctcctacaccgtcagtgacctcgccaagttcaccgagtacgagttcttcatcgtg
ccttaccaccgcaacatccacggccacccgtccaactccaggatcgccgtcacgctggaa
gacgtcccgtcagcgccgccgtcgggagtcgagagcctcgtcctgaacgcttccagcgtc
gtcctctcgtggcgtcctcctcctcgcgagcacaccaacggcaggatcaccaagtactcc
ttgtggctcttcgtgaacaagacggtccctcactccaacctcaccctggaggggaatctg
cacaccctcacgctctacaacctgacgttcgggaaacacttctcggcgacggtggcggcg
catacgaaggcaggtcaagggccgacgagcggaggtcacacgtggctgcaggacccgtcg
gcgagctcgggatccggggaaccgaagcgggtgccgtcccctctgatggcggtccttcgg
gagacctggtttatcggggccgtcggcgccgcgggcttcctggcgctctccgtcttcgtc
gccgtcgtctgctaccgccgcaagaggaacgagaagcgcgccatgggaggctacaagctg
gacgggcgcagcgtgaacggcaccatgtcgggcggcctgtggatcgagcggggcccctgg
ggtggctcctccggcggcgccaccgacgacaagagcgacgcgacgcccgagaagctcctg
aacctgaacgccgtgcccggggactacgccgaggtggacggccccgtggcgccgctcatg
cccccgggctcgcaggcgccgggcacgccggtcgcctacgccaccaccaacatcatcaag
gccaggaatggggagaaagttgagcccaatatcccagtgtacggcagcatgtacggcgat
aacagcatggtaggacaggccgatgacaatctggtcacttacagtacactaaagaaacag
caactttataagcccacactctctccggcacttaacgcgaaacagccccacggcgtagtg
cagcgcgggtatatacccccgtgggaacagtacgcccccccccccctgcccgagaacccc
ccacccgagcacccccagcagcacctctccccccacgcccagttccccaaccagcacacg
cagtggagacaccagtcgcccatggtcaacagggcccttaatcgacaggtcttttcaaca
ggatccctcccacggcatctgaacaaggtgaaagcgagccccatcatccccaaaaggggc
gttaacacgggcgacttcgacatcgccggcgaccccctgccccctcccccaccacccatg
gagatcccaaggacaccccccatccgccgagaccccaacgaccccttgccagtgaccacg
agcgtcggcctccagggtttgcagggcctgagcgggtcccgcatgatgggcgcgccagga
gccccgaggctgaaccgcgactacagcccagggagactgcccgacatgtacggagggagc
tcgatctaccagggccccatcgacgaggaagacgagagcgactgcccctacaacgaaggg
agcgctatgtacaccgaccacagtgctgtctatgaatccacgtccgccttctacgggact
atgggtgacaaggcattcgacgctgaccgcaccaacccattgctgattcagcagggcaac
cacatcagtcctcagcagagtccccagacccacacgctccaccagatgaacggactcagg
gaacgcggggcgcaattctgcctgcctcctgtatccgaggcacacaaacagcctgtgaca
caatcacacccagtttcccggtaa
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