Penaeus chinensis (fleshy prawn): 125030376
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Entry
125030376 CDS
T08118
Name
(RefSeq) protein suppressor of forked-like isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125030376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125030376
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125030376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
RGS
Motif
Other DBs
NCBI-GeneID:
125030376
NCBI-ProteinID:
XP_047476362
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All DBs
Position
11:39621397..39681938
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AA seq
708 aa
AA seq
DB search
MDETPEFGTEKLRRAWATTESNPHDMEAWSLIIRDAQNRAIDSARPIFERLVTTFPTTGK
FWKMYIEQEMRSYNFEKVEKLFQRCLTKVLNIDLWRLYVTYVKETKSSLPTYREKLSQAY
EFATDKIGMDYNSYTLWNDYANLLKNVEVVGSYAENQKIMAVRKVYQRGIVTPMANIEQL
WKDYLDFEKNINPIIAEKMNIERGRDYMNARRVGKELETETRGLNRHLPSVPPSGLPEET
KQVEIWKRYIRWEKDNPLRTDDQTLVTKRVRFAYEQCLLCLSYHPDIWYEAALFLQESSK
LLSEKGDVNASKIFSEEAAQIYERAISGPLRRNQLLYFAYADFEESRLRYQEVHKIYQRY
IEMEDIDPTLAYLQYMKFARRAEGIKSTREVFKKAREDIRTKFHIYVGAALMEYYCTKNK
DIAFRIFELGLKKCPDNADYIMAYVDYLSHLNDDNNTRVLFERVLTSGQLKNEDTVGLWN
RFLEFECNVGDLASIVKVEKRRAHVLQKLQEFEGKDTAQLVDRYKFMDLYPCTPPELKAI
GYRDISTHNMIINPNVPRGLSIHDSQEPTYARPDFSQMIPFKPKAKYIPGEHPVKGGAFP
PPPAVANLLSMLPPPHCFRGPFVKLDALVDLFMRLNLPEQGGQWSTTGSHDVRLFELSKS
VHWVVDPSGDRKRKLVPGDDSDDEDGNKPVLTSDIYRARQQKRMKDQS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaacgccggaattcgggacggagaagctgcggagggcatgggccaccacggaa
tccaacccccatgacatggaggcatggagcttgatcatacgtgatgcccagaatcgagcc
atagacagtgctagacccatctttgaacgcttagtgacgactttccccaccacgggaaag
ttctggaagatgtacatagagcaagagatgaggtcttataattttgaaaaagtggaaaag
ttgttccagagatgtttaacaaaagttctcaacatagacctttggcgactatatgtgaca
tatgtgaaggagacaaagtccagcttacccacatacagagaaaagttgtctcaggcatat
gagttcgccactgataagattggaatggactacaattcctatactctgtggaacgactat
gcaaatctgctgaagaatgttgaggttgtgggttcttatgcagaaaaccagaagattatg
gcagtcagaaaggtgtaccaaagaggcattgtgaccccaatggccaacatcgagcagcta
tggaaagattacctggacttcgagaagaacattaatcccattattgccgagaagatgaac
atcgagcgaggccgtgactacatgaatgcaagaagagtcggaaaggagttggaaaccgag
acgagaggtctgaaccgtcatctaccaagtgtgcccccctcaggcctacccgaagaaaca
aagcaggttgaaatctggaagcgatatattagatgggagaaggacaaccccttgagaaca
gatgaccagacgctggttaccaaacgtgtgagatttgcgtatgagcagtgcctcctctgc
ctgtcctatcatccggatatttggtatgaagcggcactcttcctgcaagaatcctccaag
ctcctatcagaaaaaggggatgtgaacgccagcaaaatcttcagcgaggaagcagctcaa
atctacgaacgtgctatctctggtcctttgagaaggaaccagctcctgtactttgcctat
gcggattttgaggagtcccgcttgagatatcaggaagtgcataagatttatcagcggtac
atagaaatggaggatattgatccaaccctggcctaccttcagtatatgaaatttgctcga
cgggcagaagggataaaatccacaagagaggtcttcaagaaagcacgagaggatattcgg
acaaagttccacatctacgttggtgctgctctcatggaatactactgcacaaagaataaa
gacattgcttttaggatatttgaactgggactcaagaagtgcccggataatgcagattac
atcatggcctatgttgactatttatcccatctgaatgacgataacaacacgagagtcttg
tttgaaagagtgctaacctcaggacagctgaaaaatgaggacactgttgggctgtggaac
cgtttcctggaatttgagtgcaatgttggtgatcttgcgtccattgtcaaggtcgagaag
agaagagctcatgttttgcagaagctgcaagaatttgagggcaaagacacagcacagctt
gttgaccggtataagttcatggatctctacccgtgcacacctcccgaactgaaagccatt
ggttaccgcgacatatcaacccacaacatgatcatcaacccaaatgttcccagaggattg
tcaattcacgactctcaggagccgacctatgcacgacccgacttctctcagatgatcccc
ttcaaacccaaggccaaatatatccctggagaacacccagtcaaaggtggtgctttccct
ccacctcctgctgttgccaatctgctgtccatgctgccgcctccccattgcttccgaggt
ccctttgtcaagcttgatgcattggttgacctcttcatgagactgaatcttcctgaacaa
gggggtcaatggtcaactactggaagccatgatgtcagactgtttgaactttccaaatcc
gtacactgggtggtggaccccagcggcgaccggaagagaaagctggttcctggtgacgat
tcagacgatgaagatgggaacaaacccgttttaacaagtgatatttacagagccagacaa
cagaaaagaatgaaagatcagtcatga
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