Penaeus chinensis (fleshy prawn): 125030512
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Entry
125030512 CDS
T08118
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125030512
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125030512
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125030512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
zf-C2H2_DHX34
Herpes_ori_bp
nSTAND3
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
125030512
NCBI-ProteinID:
XP_047476527
LinkDB
All DBs
Position
11:393931..401392
Genome browser
AA seq
1366 aa
AA seq
DB search
MGHSKHRDSSSESSEEKCRRKHKKKHRDSFELSEEEHRRKHKKKLRDSSSESSEEERRRK
HKKKHRDSSSESSEEERRRKHNKKHRDSLFESSEEERRRKHKKKHRDSSSESSEEEPKRK
HKKKHKKKGKKKHYKIDSSRERGRKRTRRSSSESSEDSSLGSYRQSIKRCKRSRSRTRSS
SEESVPINKKDEKKVKKEYEEWEALKLPSSYDRKSEVKDIVAQRCGDEVPGSSVEHEKDK
STSSDSEDDLMFEWEHYRYEINQIFSNDDIIKRGTTEYDDFWKFLKKYQGLQKQKTIRQM
CGNQQYREETGTAEVSSVYKVPQHFDKRYNINFALKVTTDDFQRRLPIRDLDEGKRSLSR
KRLTELKFIILLYLDFLQKQRFEKLKKLRETQANLPISNYKEEIISKVSANNVVIIAGDT
GCGKSTQVPQYLLSAGYCNIACTQPRRIACISLSKRVAYETLNEFGSKVGYQIRFEKNKT
EHTKIVFLTEGLLLRQVVSDPLLSMYDVMILDEIHERHLHTDFLLGVIKCLVMQREDIKI
VLMSATINIDLFRNYFMGKAPVVQVPGRLYPIKLQYFPIPVIEQASKSEKLNPAPYVRIL
QLIDKKYPDDERGDLLIFLSGMSEISTVVEAVKLYGQQTGKWIVLPLHSTLSVSEQEKVF
DVPPEGIRKCIVSTNIAETSVTIDGVRFVIDSGKVKEMSFDAQSKMRKLKEFWISQASAE
QRKGRAGRTGPGTCFRLYTEQEYSEFSQYSTPEIQRVPLDSLVLQMISMGLPNVRLFPFI
EPPAQEQLENAVQSLKAHAAITEAEGVTTIGNLLSQLPMDISLGKMLIMGSLFHQVEPVL
SLAAAMSVQSPFTNRARRDPDCEAFIKTLQSDHGDPFTLMASYREWLYIKQNGHENSRKW
CKRRGLEEQRFYEMTKLRHQFSQLLHESGLQEVAGCARAPLTSAERAQRSGHLRQLHDLK
RELYKDGPRKVKVLKVSHGEEVVSDEEDNRTDIKDVDFRIKNDQKQLSEIYRSSKIHTLK
DIIMMKIIICSGLYPNIAIADEHNNYKPGSEQLFHTFAKPFTVLHPNSVFSSQPEVLQIA
DSDIIEYPGFSLRNPLCSKHQFLVYVSLLETNKPYLVDSVRVPSAQVLLLFAQSVDTNAD
MTVIAFDNFIELKFPDAMSAQNLLFQAVQLRSKWKYLLDLRIQISKPTIDNRDRLITDAN
KLEKDLSVGLIDFFLTDALYAKRRLLAADITVLHVGPGAGDCILSGNPFSKDASEACQTN
NTKGGVDLTEYLTYNSLFDTECSVTTITSYDTVCPYCDEELHVTTLGRLSHMSLCLEGLL
QSSENVDVEEESKGDDPTKKKFYCDVCQHTLWLGIKDIFKHKKICK
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgggtcactcaaagcatagggactcatcatctgagtcatcagaggaaaaatgtagaaga
aaacacaaaaaaaagcacagggactcatttgagttgtcagaggaagaacatagaagaaaa
cacaaaaaaaagcttagggactcatcatctgagtcgtcagaggaagaacgtagaagaaaa
cacaaaaaaaagcatagggactcatcatctgagtcgtcagaggaagaacgtagaagaaaa
cacaataaaaagcatagggactcattatttgagtcgtcagaggaagaacgtagaagaaaa
cacaaaaaaaagcacagggactcatcatctgagtcgtcagaggaagaacctaaaagaaaa
cacaaaaaaaagcataaaaagaaaggtaagaagaagcactacaaaatagattcatcaagg
gagaggggcaggaagaggaccagaagatcatcctcagaatcaagtgaagattcaagctta
gggagttatcgtcagagtataaaaagatgcaagagatctaggtcaagaacgagatcctca
tcagaagaatcagttccaatcaacaaaaaggatgaaaaaaaggtgaagaaagaatatgaa
gaatgggaggcactaaagctgccctccagttatgacagaaaatctgaagttaaggatatt
gtagctcagcgttgtggtgatgaggtccctggttcttcagtcgaacatgagaaagataaa
agtacaagttcagattcagaggatgatctaatgtttgaatgggagcactatcgatatgag
attaatcagatattctcaaatgatgacattatcaaaagaggaacaactgaatatgatgat
ttttggaaattcctgaaaaaataccaaggtctccagaaacaaaaaacaataagacaaatg
tgtggaaatcagcagtatagagaggagacagggacagctgaagtaagtagtgtttacaaa
gttcctcagcattttgataaaagatacaatatcaattttgctcttaaggtcactactgat
gattttcaaaggagacttcccattagagatttagatgaaggtaagcgaagtctgtcaaga
aagagattaactgaactcaagttcatcatattgctttatttagattttctgcagaaacag
aggtttgaaaagctgaaaaagttaagggaaacgcaggctaaccttccaatttcaaattat
aaagaagaaataatttcaaaagtttctgcaaacaatgtagtaattatagctggtgacaca
ggttgtggtaagtctacccaagtgccacaatatctactttcagcaggttattgtaacatt
gcatgtactcagccacgtcgtatagcatgcatttcactgtcaaagcgtgtagcatatgaa
acattaaatgagtttggttcaaaggttggttatcagataagatttgaaaagaataagacg
gaacatacaaagattgtatttttgacagaaggccttcttctcagacaagtggtcagtgat
ccactgctctcaatgtatgatgtaatgattcttgatgagattcatgaaaggcatctccat
acagactttctcttaggtgttatcaaatgccttgtaatgcagcgagaagacatcaagatt
gtcctaatgtctgctacaataaacattgatctctttaggaattacttcatggggaaggct
ccagttgtccaagttccaggaaggctttatcccatcaaactgcagtactttcctatcccg
gtgatagagcaagcaagtaagagtgagaagctgaatccagcaccttatgtaagaatttta
cagctcattgacaaaaagtatccagatgatgaacgaggagatttgctgattttcctcagt
ggcatgagtgaaatatcaacagttgttgaagctgttaagctttatggacagcagactggt
aaatggattgtgcttcctttacacagtactctgtcagtatcagaacaagaaaaagtgttt
gatgtgcctccagaaggaattagaaagtgtattgtctccaccaatattgctgagacctct
gtaacaatagatggtgtacgatttgttatcgattctggcaaagttaaagaaatgagtttt
gatgcacagtcaaaaatgagaaagttgaaggaattttggataagtcaggcctctgctgaa
cagagaaaaggtcgagcaggtagaacaggaccaggcacttgtttccgactgtacacagaa
caagagtattctgagttctcccaatacagcaccccagaaatccagcgtgtccccctagac
tcattagtcttacagatgatatccatgggcctccccaatgttcggctcttcccattcatt
gagcctcctgcccaagaacaattggaaaatgcagttcagtcactgaaagctcatgctgcc
atcactgaagctgaaggagtaacaactattggaaaccttctctcacagcttccgatggac
atcagcctcgggaagatgctgataatgggatctcttttccatcaggtcgaaccagttctc
tcgctggctgcagcaatgagtgtgcagagtcccttcaccaaccgagctcgaagggatcct
gattgtgaggctttcatcaaaactcttcagtcagaccatggtgaccctttcactcttatg
gcctcatacagggaatggctgtacatcaagcagaatggacatgagaattcaagaaaatgg
tgcaagagacgagggttggaagaacagagattttatgaaatgacaaagttgcgccatcag
ttttcacagctgctacatgagtcaggcttacaagaagtggctggttgtgctcgtgcccca
ctgacaagtgctgaaagagctcagagaagtggtcacttgcgccagcttcacgatcttaaa
agagagttgtacaaagatggaccgaggaaggtgaaagtactgaaagtctcgcatggggag
gaagttgttagtgatgaagaagataaccggacagacataaaagatgtcgatttcaggatc
aagaatgaccagaagcaactttctgagatttaccgaagtagcaaaatacatacactgaag
gatattatcatgatgaaaattataatatgtagtggactctatcccaatatagcaattgca
gatgaacataataattacaagcctgggagcgaacagttatttcacacctttgcaaagccc
tttactgttctgcatccaaatagtgttttttctagccagcctgaagttcttcagattgca
gattctgatataattgaatatcctggatttagtctacgaaatcctctatgctcaaagcac
caatttttagtatatgtttctttgttggagacaaacaaaccctatctagttgattcagtg
agagttccttcagctcaggtgttgttgttatttgcacaaagcgttgataccaatgcagat
atgactgttatagcttttgataatttcattgaattaaaatttccagatgccatgtctgct
cagaatcttcttttccaagctgttcagttacggtcgaagtggaaatatttgttggacttg
agaatacagatttctaaacctacaattgataatcgggatcggttaattactgatgctaat
aaactagaaaaggacctttctgttggattaattgatttcttcttaactgatgcactatat
gcaaagagaagacttcttgctgcagacataacagttctccatgtgggacctggggcagga
gactgtatcttgagtgggaatccatttagtaaggatgcaagtgaggcatgccaaacaaac
aatactaagggtggggtggatctcacagaatacctcacttacaacagcctctttgataca
gaatgtagtgtcaccaccatcacttcttatgatacagtctgtccttattgtgacgaggaa
ttgcacgttacaactttagggcgtttgtcacacatgtcactttgcttggagggcttactc
cagtcttctgaaaatgtggacgtggaagaagaaagcaaaggtgatgacccaacgaaaaag
aaattctattgtgatgtttgccagcacaccctgtggttaggtattaaggacattttcaaa
cacaagaaaatttgtaaatag
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