KEGG   Penaeus chinensis (fleshy prawn): 125030620
Entry
125030620         CDS       T08118                                 
Name
(RefSeq) cyclin-H-like isoform X1
  KO
K06634  cyclin H
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03022  Basal transcription factors
pchn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125030620
  09124 Replication and repair
   03420 Nucleotide excision repair
    125030620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchn03021]
    125030620
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125030620
Transcription machinery [BR:pchn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     125030620
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     125030620
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB
Other DBs
NCBI-GeneID: 125030620
NCBI-ProteinID: XP_047476737
LinkDB
Position
11:28256962..28281930
AA seq 332 aa
MYLSSTQYQNWTFRDEHEVAKLRFQANHDFIAKFGSSMSPQEKMQFFLSVEEEHIMVRTY
EYSLRDFCKKFRDPRDGRIRMPPAVTTTAQHYFKRFYLFNSVMDYHPKEILVTCVYLACK
IEEFYVTINDFVHNVRGDKKKAAEIILNNELQLTQELQFHLIIHQPFRPVEGLLIDIKTR
FPQLRDPERLRPHVEEFLERVNLTDAIILYTPGQIALAAVTTAVSRLGENLDQYVTDILF
PNDQRLHLKVLIDAVRKIKKMVKNAEPPASDTVRREIEGKLEKCRNQQNNPNSSQYRANY
SEWDDDEVMMAASPMQEDTALGVERIRSPSNY
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtatctcagcagcacacagtatcagaattggactttccgtgacgaacatgaagtggca
aagttgcgatttcaggccaatcatgacttcattgcaaaatttgggagcagtatgtcacca
caggagaagatgcagttcttcctatcagttgaagaggagcacataatggtacgcacttat
gaatattccttgagagacttttgcaaaaagttcagagaccccagagatggaagaatcagg
atgcctccagcagtaacaacaacggcacaacactactttaagagattttatttattcaat
tctgtcatggattatcatcccaaggaaattctagtgacctgtgtatatcttgcttgtaaa
attgaagagttttatgtcacaatcaatgattttgttcataatgtaagaggagataagaag
aaagctgccgagattattttaaacaatgaactgcagctaacacaagaattacaatttcat
ctcattattcatcaaccattccgcccagtagaaggcttactcattgacattaagacaagg
ttcccacagctaagagatccagaaagattgcgaccccatgtggaagagttccttgaaagg
gtaaacttaactgatgcgattattctatatactcctggtcagattgctttagctgcagtg
acaacagctgtgagcaggttaggggaaaacctagaccagtatgtcaccgatatcctcttc
ccaaatgaccaaagactgcatctcaaagtccttatagatgctgtgagaaaaatcaagaag
atggttaagaatgctgaacctcctgcctcagacacagtgcggcgtgagattgagggcaag
ttagagaagtgcagaaatcagcaaaacaatccaaattcatcccagtaccgggcaaactac
tcagaatgggatgatgatgaagtgatgatggctgcttccccaatgcaggaagacacagct
cttggagtagagagaatacgatcaccatcaaactattaa

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