Penaeus chinensis (fleshy prawn): 125030843
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Entry
125030843 CDS
T08118
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125030843
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchn04147
]
125030843
Membrane trafficking [BR:
pchn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
125030843
Exosome [BR:
pchn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125030843
Exosomal proteins of bladder cancer cells
125030843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
NBCH_WD40
TPR_Edg1
Motif
Other DBs
NCBI-GeneID:
125030843
NCBI-ProteinID:
XP_047477111
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Position
11:23352288..23414832
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AA seq
1228 aa
AA seq
DB search
MLTKFETKSARVKGLSFHSKRPWVLASLHSGIIQLWDYRMCTLVDKFDEHEGPVRAVCFH
QQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTEFHQEYPWILSASDDQTIRIW
NWQSRSCVSILTGHNHYVMCARFHPTQDLIVSASLDSSVRVWDISGIPGKPGGLRKKNVS
PGMGGLTGSDDHHTRNPELFSAGDATVRHVLEGHDRGVNWAAFHPTLPLVISGSDDRQVK
LWRMNDSKAWEVDTCRGHYNNVSCVMFHPRQELILSNSEDKSIRVWDMAKRICLHTFRRE
HDRFWVLAAHPTLNLFAAGHDSGMIIFKLERERPAYALYGNLLYYVKERFLRRLDLTKNK
DVAVMQLRPGSRAPVYSMSFNPAENAVLLTTRTHNMDNSNYDLYQIPKETDSQNPDSPDS
KRSAGLTAVWVARNRFAVMDKSHQVVIKNMQNEVMKKVATPPCDELFYAGTGMLLLRDND
GVSLFDVQQKRVLGTARISKCRYVVWAANMTSVALLSKHTILICNRKLERLCSITETNRV
KSGSWDDSGVFVYTTSNHIKYALTNGDHGIIRTLELPVYVTRVAGNSVYCLDRQATPRIL
TIDSTEYRFKLALVQRKYDEVLQMVRGAKLVGQSIIAYLQKKGYPEVALHFVKDERTRFL
LALECGNIDVALDAAKALDDKGCWEKLAEHALLHGNHPVVEYCYQQTKNYDKLSFLYLIT
GNLAKLRRMMKINEIRKDYEGWYANALYLGDVPERIRVLKACGKTSLALLTAVTHGYAQE
AESLAAHVENGAIPEPLPSAQLLQPAAPVQPMDTAWPLLTVAKGFFDTAVAGGKAAGGAA
AAAMVVDDAGDIAGDGWGDDDDENVEDTDLAVEGGDTEGGGWEVDDDLDLPPELEGSASA
GAGGSGEDGFFIPPPRGHPPTHGWTQRSQLAIDHVLAGAFESATRLLHDQVGVVNFEPYR
HLFLSSYAHSRTSYTGAPAMPSLFAYPARNWRTAQNKDQLPALGLKLSNLMDRLKEASQL
TTAAKFSEALDKLRWILLAVPLIVVDTKQEITEAQNLLRVCKEYVVGISMELYRKGLGKG
SPEEQQRSLELAAYFTHCELQPGHQILTLRTAVNLAFKMKNYKMAMSFGRRLLNLGPRPE
VAQNIRKVVQACEKNPVDEMSIQYDEHNPFTVCASSYVPIYRGKPEVQCPLCSASYLPEH
KGITCKICDVAQVGKDSIGLRISPLQFR
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaatttgaaacaaaaagtgcgagagtcaagggactctccttccactcaaag
cgaccatgggttcttgccagccttcacagtggaatcatccagttatgggattatcgtatg
tgcaccttagtggataagtttgatgaacatgagggtccagttcgagctgtgtgcttccac
caacagcagccgctgtttgtgtctggaggagatgattataagatcaaggtgtggaattat
aaactgcgcagatgcctgtttacgctgcttggtcacttggattacatccgtactacagag
ttccatcaggaatacccctggatcctctcagcctctgatgaccagaccatacgaatttgg
aactggcagagccgctcatgtgtgtccatcctgaccggacacaatcactatgtgatgtgt
gcccgcttccatccaacgcaagacctgattgtgtctgcttcactggactcttctgtccgt
gtctgggatatctcaggtattcccggcaaacctggaggccttcgcaagaagaatgtctcc
cctggaatgggaggccttacggggagtgatgaccaccacaccaggaatcctgagctcttt
agtgctggagatgccactgtgcgccacgtgctggagggccatgaccgtggagtcaactgg
gcagcattccatccaactcttcctctggttatttctggttctgatgacagacaggtcaag
ctgtggaggatgaatgattcaaaggcttgggaggttgacacttgccgtggtcactacaac
aatgtgtcttgtgtaatgttccatccaagacaagagttgatcttgtccaattcagaggac
aaatctatccgtgtgtgggacatggccaagagaatctgcctccacactttccgccgggaa
catgatcgcttctgggtcctagcagcccatccaaccctcaacttgtttgcagctggccat
gacagtggcatgatcattttcaagcttgagagagagaggccagcctatgctctctatggc
aacctcttgtattatgtcaaggagaggttcctcaggcgacttgatttaacaaagaataag
gatgtggctgtcatgcagttgcgtcctggatcccgagcacctgtatatagtatgtccttc
aacccagctgagaatgctgtactccttacaacacgtacccataatatggacaacagcaac
tatgacttgtatcaaatccctaaagaaacagattcccagaacccagattctcctgactcg
aagaggtcagctggactcacagctgtttgggttgcaagaaaccgctttgcagtaatggat
aagagtcatcaggttgtgattaagaatatgcagaatgaggtcatgaaaaaggttgctaca
cctccttgtgatgaactcttctatgcaggaacagggatgctcctcctgagggataatgat
ggagtttctctctttgatgtccaacaaaagagagtccttggaacagccagaatttccaaa
tgcagatatgttgtatgggctgcaaacatgactagcgttgctctactctctaagcatacc
attctcatctgcaaccgtaagttggagaggctttgctccatcactgagactaacagggtc
aagtcaggctcctgggatgatagtggtgtgtttgtctacaccacaagcaatcacatcaag
tatgcacttaccaatggagatcatggaatcattcgtactctggaactgcctgtctatgtt
accagggtggcaggcaattcagtgtattgccttgaccgtcaagcaactccaaggattctg
accattgattcaactgaatatagattcaagctggccttggtccagcgtaaatatgatgaa
gtgctgcaaatggtacgaggcgccaagctagttggacagtccatcattgcctacttgcag
aaaaagggttacccagaagtggctctccattttgtaaaggacgaaagaacccgattcctt
cttgcacttgagtgtggcaacattgatgttgctcttgatgctgcaaaagctcttgatgac
aaaggttgctgggaaaaactggctgaacatgctcttcttcatggaaatcaccctgtggtt
gagtattgctatcagcagaccaaaaactatgataagctgtcattcctgtacttgatcact
ggaaacttggctaagttgcgccgcatgatgaagattaatgaaattcgcaaggattatgag
ggctggtatgccaatgcactctacttgggtgatgtcccagaacgcataagggtgctaaaa
gcatgtggcaaaacatctttagctctactgacagcagtcacacatggctatgcacaggaa
gcagagtccctggctgcccatgttgagaatggagctattccagaacctcttccaagtgct
cagctgttacaaccagcagcacctgtgcagcctatggacacagcttggccactcttgact
gttgcaaagggcttctttgatactgctgttgctggaggcaaagcagctggaggagctgca
gcagctgccatggtggttgatgatgctggggacattgctggtgatggatggggagatgat
gatgatgagaatgttgaagatactgatttggctgtagaaggtggagatactgaaggaggt
ggatgggaggtggatgatgacctggacctgccaccagaacttgagggatctgcttcagct
ggtgctggaggatctggtgaggatggcttcttcatccctccacctcgtggacacccacca
acccatggatggacacagcgaagtcagttggcaattgatcatgtcttggctggagctttt
gagtctgctactcgattacttcatgatcaggtgggagttgtgaacttcgaaccctaccgt
catctgttcctctcatcttatgcccattcccgcacaagctacactggtgctcctgcaatg
ccatctctctttgcatacccagctcgtaattggcgaactgcacagaacaaggatcagtta
cctgctctgggattaaagctttccaatctaatggatagacttaaagaagcatctcagttg
acaacagcagccaaattttcagaggctctggataaactgcgctggattttacttgctgtt
cctctcattgttgtcgatacaaagcaagagattacagaagcacagaatctgctaagagtg
tgcaaggagtatgttgttggtatcagtatggagttgtatcgtaaaggtttgggtaagggt
agtccagaagaacaacagcgctcccttgaattggctgcctacttcacacattgtgaacta
caacctgggcaccagattctgacactgaggactgcagtgaatttggcctttaagatgaag
aattacaagatggccatgagctttggtcgtcgtctgctaaatcttggacccagaccagaa
gtggctcagaatataaggaaggttgtgcaggcatgcgagaagaacccagttgatgagatg
tcaatccagtatgatgagcataacccattcactgtatgtgcaagttcatatgtacccatt
taccgtggaaagccagaagttcagtgcccattgtgtagtgcatcatatctaccagagcac
aagggtattacttgcaaaatttgtgatgttgcacaagttggcaaggattccattgggctt
cgcatatcaccactacagttccgatag
DBGET
integrated database retrieval system
