Penaeus chinensis (fleshy prawn): 125030894
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Entry
125030894 CDS
T08118
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125030894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125030894
Membrane trafficking [BR:
pchn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125030894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Clathrin
WD40_CDC20-Fz
WD40_2
Beta-prop_HPS5
ANAPC4_WD40
zf-RING_5
Beta-prop_EML_2
zf-RING_2
WDR55
zf-RING_11
zf_RING_Vps8
TPR_VPS8_2
Motif
Other DBs
NCBI-GeneID:
125030894
NCBI-ProteinID:
XP_047477181
LinkDB
All DBs
Position
12:complement(25818678..25844702)
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AA seq
1403 aa
AA seq
DB search
MATEGEEQMSNNVENPDEAELVKQLDLQLEELDDVEFQLPPIGELPTLESILNENDPGSA
SDDDLGIPPTPIQKTSFSNDGGDTLSVHSRGSSDSRSRTSSDRHSCGSRSRKDAQHKTHG
SILRHVILTGVAAQLVSAHDRVGAGLPTTMAVGNIICIGTSHGLILVFEPTQALKFCLGS
TQLGEQYGSVSALALNHDCTRLLAGFAKGQICVFDLTSSKLLQTISDAHTPFTAVLHLKW
TDFPGMAVISDSGGSVFELSIKRTMGLNSNESRCIFSGSRGEVCTIEPLLMSQFRATPVS
EPVILAMATISKVIVVSLRPQLKVLFSHPLKASASTLPLLAWQFVVIQMPDGTRVIDPVL
AFGREKNVYFYQLTHGSQEELQFIPLQKMSLSYLVQAMAWLNSRTLAVMDTKEHLHVIDV
KTQDELETVDLAHLGLVYASAHFKAIATGSNVSKAMALAGERACYHSMVSFGSQVLLLGT
KSFQVVTVRTWVDRLDHLVRGGHVREALQLALDIYQDKAQAVVGLKHKKEKRQLLVQEKI
NELLNQYLDSALEKLPERNNLEGLNKYYTQLVPLCVQVAVGAHLRDLLFGRMWDLFSEDA
ISKGIFLESLEPYILSDQLADMSPSISQCLLSHHEACGRLQAAEACIVHLQVTSLDLHQA
MTLCWTHGLYDAIFYIYTHGMRDFVTPLEELITVLSNAMDSGKALTDSQVMLGNKILVYV
SSCLAGRAYPRGEIDPEELQQVKHEIFKCITSLHSKNAKPTEQAYPFLRTLLRFDTREFL
NVLALAFEEAEFTSELGMIQRQRVVDILLQVMVEGEGFGPAQLGGLFTFIARQMSRQQGA
IAVNRQLFDQVLCHLTAPDASSHHEERQTALLELLQEGGLVHYKVEQLLEKARQAGFYRV
CEFVYEERGEHEKIVECYLQDQMRKHQVFTYIRSVLSSPQFTDLHAQKIQQQFLKHIKSL
LEIDSSRVASLLLTMPQLTPLLPEVTSHLRGEPQLLYNALHALFTYRSTHASPGGHGVDN
NDGTLTPELQEEYIDLMCQVNPSQVYAYLKGAEGYRLEQTLEICRRHKQQDSTAFLLERA
GDIKGAFDILLNILKSKVDDLLTCVKAEGATNCLLSLGHVQAQVVKLVRVCQLGSSQLEE
SGRRELWFPLLDVLLSTQPPLAHDQQLAHEMRGMVGHVVNSMMTHISLPAILERVMHDPG
YCDGNFAQIKHLLKGMVERYVYEETLYATVIRIIAGDQLSYLTMQHSQACSPLIVYTTTC
AICHSVYHPSSKAVAHSCGHSYHARCGGEAPACVLCTGSSQEEQAADQSQAPDSIEEPSV
GLDDTQLEGIRRVKALSFGGSRLQFLDELSTPRGGPPTDNTSKANQSWRSSGSVSGNQDI
WSSQDFALKLAPPTIDFEGEANW
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaaggggaggaacaaatgtcaaataatgttgaaaatcccgacgaagcagag
ttggttaagcaattagatcttcagctcgaagagcttgatgatgttgaattccaattacca
cctattggggagctgccgactcttgagagtattttgaatgaaaatgacccaggatctgca
tctgatgatgacttagggattcctcccacacccatacagaagacatcattttccaatgat
ggtggcgacacattatcagtccattctcgaggcagctcagactctcgaagcaggacatcc
tctgatcgtcacagctgtgggagcaggtctcgcaaagatgcacagcacaagactcatggt
tcaatactccgtcatgttattctcacgggtgtggcagctcagctggtttctgctcatgac
cgtgtgggtgcaggactaccaacaaccatggcagtgggtaacatcatatgcattggcaca
agccatggcctcatccttgtctttgagcctactcaggctttgaaattctgtttaggatca
acacagttgggagagcagtatggatctgtgtctgctctggccctcaaccatgactgcacg
cgcctccttgctggttttgccaagggtcagatttgtgtctttgatctgacatccagcaag
ctccttcagacaatctctgatgcccacacaccattcacagctgttttgcatttaaagtgg
acagactttcctggaatggctgtcattagtgacagtggtgggtctgtctttgaactctcc
atcaagaggaccatggggctcaactccaatgagtctcgttgcatattctcaggcagtcgt
ggggaagtgtgtaccattgaacccctgttgatgtcacagttccgtgctaccccagtttca
gaaccagtcatattggcaatggctactatatcaaaggtcattgtggtatctttgaggcca
cagttgaaagtattgttctctcacccactaaaagcctctgcatctacactccccctcttg
gcttggcaatttgtggtgatacaaatgcctgatggaacaagagtaattgatcctgtgttg
gcctttggtcgtgagaaaaatgtgtatttttatcagttaacacatggaagtcaggaggag
ttgcagtttatcccactgcagaaaatgtctttatcatacctagtccaagccatggcatgg
ctcaactcccggactctggctgtgatggataccaaagagcacttgcatgtgattgatgtc
aagactcaagatgagctagagactgtggatcttgcccaccttggcctggtctatgcttct
gcacacttcaaagccattgccactggaagcaatgtcagtaaagcaatggcactggcaggt
gagagagcctgttatcactccatggtcagttttggatcacaggttctgctacttgggaca
aaatcattccaggtagtcacagtgcgcacatgggtggaccggctggaccaccttgttcgt
gggggacatgtccgtgaggctctgcagttggcattagacatatatcaagataaggctcaa
gctgttgtaggactcaaacataagaaagagaaaagacaattgcttgttcaagaaaaaatc
aatgagcttcttaatcagtaccttgactctgcactagagaagcttccagaacgaaacaac
ctggaaggcctgaataagtattatacccagttggtccctctttgtgtccaagttgctgtg
ggagctcaccttcgggacctgctgtttggcaggatgtgggacctcttcagtgaagatgcc
atatccaaaggtattttcttggagtcactagagccatacatcctgagtgaccagttggca
gacatgtcacccagcatatcgcagtgcctcctgtctcaccatgaggcatgtgggagactt
caggctgcagaggcttgcattgtccacctacaggtgacatcccttgacctccaccaagcc
atgaccctttgctggactcatggactctatgatgctatattctacatctacacccatggc
atgagagattttgttactccattggaagaactcatcactgttttgagtaatgctatggat
agtggcaaagccttaactgatagtcaagtgatgctgggaaacaagattcttgtgtatgtg
tcgagttgtctagctggacgtgcatacccacggggtgagattgacccagaggaactccag
caagttaaacatgaaatattcaaatgtattacatcacttcattcaaaaaatgcaaagcca
actgaacaggcttaccctttcctaagaactctgttaagatttgatactagggagtttttg
aatgtcctagcactagcttttgaggaggctgagttcacctcagaacttgggatgatccag
aggcagcgtgttgtagatatcctcctccaggtgatggtagagggggaaggctttggtcca
gctcagttgggaggactcttcaccttcatagcacgtcagatgtccaggcaacagggcgcc
attgcagtcaacaggcagctgtttgatcaagttttgtgccacctaacagctccggatgca
tcaagtcaccatgaggaacgtcaaacagcattactagagctcttgcaagaaggtggtctt
gtacattacaaggtggaacaactgttggagaaagcacggcaagcaggattttacagagtg
tgtgaattcgtgtacgaagaaagaggagaacatgaaaagattgttgaatgttacttacag
gaccagatgaggaaacatcaagtgtttacatatatacgttctgtcctgtcatcaccacag
ttcacagacttgcatgcacagaagattcagcagcagttcctaaaacatatcaagagtctc
cttgagattgatagcagccgggtagccagcctactcctgaccatgccacagctgacccct
ctgctgccagaagtcaccagccatttgagaggagagccacagttactgtataatgctctt
catgcactcttcacttacagatcaacccatgcctctccagggggccatggggtggacaac
aatgatggtactctgacaccagaactgcaggaggagtatattgatctcatgtgtcaggtc
aacccaagccaggtttatgcatacctcaagggtgctgaggggtatcgtctagagcagaca
ctcgagatatgtcggcggcacaagcagcaagactcgacagctttccttttagaaagagca
ggcgacattaagggtgctttcgacattcttctgaatatactgaagtcaaaagttgatgat
cttttgacttgtgtgaaagctgaaggggctaccaactgcctgctttcactgggccatgtt
caggcacaggttgtgaaattggtacgtgtatgtcagttgggttcaagccagctggaggaa
tcaggtcggagagaactatggtttcctttgcttgatgtgctgctctccacacagccacca
ttggcacatgatcagcagcttgctcatgagatgcgaggaatggtaggccatgtggtcaac
agtatgatgacccatatctcccttcctgcaatactagagcgtgtcatgcatgatcctggc
tactgtgatgggaactttgctcaaatcaagcatctgctgaaaggtatggtggagaggtat
gtttatgaagaaaccctttatgctacagtaatcagaataatagctggggatcaacttagc
tacctaacaatgcagcacagtcaagcatgttccccccttattgtgtatacaactacctgt
gccatctgtcacagtgtctaccacccatcaagcaaagcagttgctcatagttgtggtcat
agttatcatgctcgctgtggtggagaagcccctgcctgtgtgctctgtacaggcagcagc
caggaggagcaggcagctgatcagtcacaagctcctgattccatagaggaaccaagtgtg
gggcttgacgatacccagctggaaggcattcgacgagtgaaggccctgagctttggaggg
tcgagattacagtttttggatgaattatcaactccacgtggaggacctccaacagacaat
acatctaaggcgaatcaatcttggaggagctctgggtcagtttcaggaaatcaggatatt
tggtcgtcacaagactttgccttaaaattagcaccaccaaccatagactttgaaggtgaa
gccaactggtga
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integrated database retrieval system
