Penaeus chinensis (fleshy prawn): 125031092
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Entry
125031092 CDS
T08118
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125031092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125031092
03036 Chromosome and associated proteins [BR:
pchn03036
]
125031092
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125031092
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125031092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TPR_19
Motif
Other DBs
NCBI-GeneID:
125031092
NCBI-ProteinID:
XP_047477531
LinkDB
All DBs
Position
12:complement(12389268..12410493)
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AA seq
1141 aa
AA seq
DB search
MYTPVSDRGGGGAANTSFTSASARAAAAAAARRRSAVGFNTSARRSPFTTPGRSTPLNRS
LQATQLMEGSGQYTLESYGASLPALVMEALTFADRNVEMSAVLSQCGWAWLVCGRRLLVW
RYKVDDSRRLVNHQFRELTLPPSDLAHRAQLVVVYAANEGQVPACVAASPEGFVRFWPSI
AHEGSYFEVSTELQGQECDSLVFLGSSLGCLLATTTSTTLLIQPGQGSGGNQTINVRQLK
VPAGLLGGISRRVSSLVFGSMPTQAPEARLVRAVAVPGAESDERSVLVLSANSLQKWYLI
PNEPDKLVYECNVEKYIREGFVDHVWGRERAGATQLRVWLVDMQPTSGVSSVMVLTAAVN
PQVSQQLVYALATMDTGGSAPPLAVGNFSVLKHSEYYQDSAENVLLSQRFLLCANTAYIY
NKNTVLCVSAVGEGDSGDRVEFSGAGDSILGVGRSQGLPLFFSANHGIVSIAPSQHLNQS
SMLLNESVAEDTSRLCEALNISSVGLEAITASQDHTARLQAAFLHFNKNNIPQAQALLDE
LFPGADNSTLDATVISLSTNLLDDSPATDPRWAESNEAGGTGAPMSLILQNQLRDKTTAH
QYYINFLHQTGLWQRLSVGQVEETRVLTRVLLSEHAERLAFATSLRTRHNDHQHLIDAAI
RHVLNERGETPRGKLTHADLFYRRVSQIEDIIWGLLRAQEEVLAADVAPRDAPATIHSVN
SLVLALLQSARIGSASISGITGTANDPPLEHIPWTATQGSRGVRTLLLEQHNTTVEVGLA
RAEDGATRAKLYTQMVDLADCILTGYQPQLRSLVSVSHDLHQSLLRSYERDRYNLIQPLV
QGEQYDQAVGLAEKYCDFRTLVEVCDRTNNQERLSQYMTQFGSEGFSDFVFRWYLETGKR
GRLLSHGDQGGLSRFLQDYTSLAWLHQIQTRDFPSASTTLRQLGLDEMTYLSRKKTLLSL
SKLCNLAASVPGSADTSVMEDDTMTLEEELILYQEQLPEPVLNAHSLEADTMRVLSPTEL
VHLYTGDENTYANEFDFKKALDLLAFVPGEEVPELKKDIWVRAVLRNSWHHMDTDNPLEA
ISDTLLFKTIELAFTQGTDIKELLLPAEELLECEELGDLKEDATFKFLVNAGYEKITQLV
G
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtacactccagtctcagaccgagggggaggaggggcagccaatacttcattcacatct
gcgagtgcaagagcagcagcagctgctgctgcacgcagacgcagtgcagttggcttcaat
accagtgcgaggcgatcaccatttacaacaccaggtcgctccacacctctcaatcgatct
ctgcaagcaacacagctcatggaaggcagtggccagtataccctagagagctatggggcc
tccctgccagccttggtaatggaagccctgacatttgctgaccgaaatgtggagatgtca
gcagttttatcacagtgtggctgggcgtggcttgtgtgtggccgacgtctcttagtgtgg
aggtataaagtggatgactcaagacgccttgtcaaccaccagtttcgggaactcactcta
cctccgtcagacttagcacacagagcccagctggtggttgtatatgcagcaaatgaaggc
caggtaccagcgtgtgtagcagcatcacccgaggggtttgtcagattctggcccagtata
gcacatgaaggctcatattttgaagtcagcaccgaactacagggtcaagagtgtgacagc
ctggtgttcctggggtcatccttagggtgtctgctggccacaaccacatccaccaccctg
ctcatccaaccaggccagggctcgggtgggaaccaaaccattaatgtgaggcagttgaag
gttcctgctgggctcttagggggtatatcacgcagagtttcctcactagtgtttggatcc
atgcccacgcaagccccagaagcgcgcttggtccgtgcagtagcagttcctggtgcagag
tcagatgaacgttcagtgctggtgctgtctgccaactccttgcagaagtggtacttaatc
cctaatgaacctgacaagcttgtttatgagtgtaatgttgaaaaatacatcagagaagga
tttgttgatcatgtttggggccgtgagagagcaggagcgacacagttgagggtgtggttg
gttgacatgcagccgacctcaggggtgtcatcagtcatggttttgacagcagcagtgaac
cctcaggtctcgcagcaattggtttatgcccttgccacaatggatactggtggctcagct
ccaccccttgcagtcggcaatttctccgtattaaagcattcagaatattatcaagattct
gcggaaaatgtgctcctctcacagcgcttccttctctgtgcaaacacagcttatatttac
aacaagaacacagtcctctgtgtctcagctgtgggcgaaggggacagtggggatcgagtg
gagttctctggagcaggggatagtatcctgggtgttggcagatcgcagggtttgcccctc
ttcttctctgcaaatcatggcattgtgtccattgcacccagtcagcacctgaaccagtca
agcatgttgttgaacgagagtgtggctgaagatacctctcggctttgtgaggctctcaac
atcagcagtgtgggcctggaagctatcacagccagccaggaccatacagcccgactccag
gcagccttcttgcatttcaataagaacaacattccacaggctcaggctcttctggatgag
ctcttcccaggggcagacaactccactctagatgctactgtcatcagcctttcaaccaat
ctgctggatgactctccagcaacagatcctcgctgggctgagagcaatgaggcagggggt
acaggtgctccgatgtccctcatcttacagaatcagttgagagacaagacaactgcccat
cagtactacattaactttttgcaccagactggactatggcagcgcttgagtgttggtcag
gtagaagaaacccgagtcctgactcgagtattgctttcagaacatgcagagcggttggca
tttgcaacatctctacgcacaagacataatgaccatcagcatctgattgatgctgccatt
aggcatgtgctaaatgagcgaggagagactccaagagggaaactgacccatgcagatctc
ttttatcgccgtgtaagccagattgaagacatcatctggggattgttgcgtgcacaagag
gaggttttggctgctgatgtcgcacctcgtgatgctccagccactattcactcggtaaac
agtcttgtcttggcactgttgcaaagtgccaggataggcagtgcatctatttctgggatc
acagggacagctaacgatcctccccttgaacacataccttggactgccacccagggttct
cgtggagtgcgaacccttctgctggagcagcataacaccacagtggaggttggcctagca
agagctgaagatggagcaacccgagctaagctttacacacagatggttgaccttgctgat
tgcattctgaccggataccagccacaactccgttctcttgtatctgttagccacgacttg
caccagtctcttctgcgctcgtatgagagggaccgctacaatttgattcaacctcttgta
caaggcgagcagtacgatcaagcagttggacttgctgagaagtactgtgacttccgcacg
ctggtagaagtctgcgatcgtaccaacaaccaagaaagactgagtcagtacatgacacag
tttggctcagagggtttctcggactttgtgtttcgttggtacttggagacaggtaaacga
ggtcgcttgctgagccatggtgaccaagggggcctttctcgcttcttgcaagactacact
tcccttgcatggttgcatcagatccaaaccagagattttccatcagcttccaccacttta
cgtcagctaggcttggatgagatgacttaccttagcagaaaaaagacattgttaagcctt
agtaaattatgcaacctggctgctagtgtgccaggcagcgcagatacaagtgtgatggag
gatgacactatgaccttagaagaggaactcattctgtaccaggaacagttgcctgaaccg
gtcctcaatgcacactcccttgaggctgataccatgagggtcctatcacctactgagctt
gttcatctctatactggagatgaaaacacctatgccaatgagtttgacttcaagaaggcc
ttagatttgcttgcctttgtacctggagaagaagttcccgagttgaagaaagacatctgg
gtgcgtgctgtgcttcgcaactcctggcatcacatggacacagacaatccactagaagca
attagtgacacattgcttttcaagactatagagctggcattcacacaagggactgacata
aaggaactgctacttcccgctgaagaattgctggagtgtgaagaactgggtgacctcaag
gaagatgccacattcaagttcctggtgaatgctggctatgaaaagatcactcagctggtt
gggtag
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