Penaeus chinensis (fleshy prawn): 125031324
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Entry
125031324 CDS
T08118
Name
(RefSeq) homeobox protein cut-like isoform X1
KO
K09313
homeobox protein cut-like
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchn03000
]
125031324
Transcription factors [BR:
pchn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
125031324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HNF-1_N
RhlB
Motif
Other DBs
NCBI-GeneID:
125031324
NCBI-ProteinID:
XP_047477971
LinkDB
All DBs
Position
12:complement(19364311..19711513)
Genome browser
AA seq
1493 aa
AA seq
DB search
MAAPGPDAQGGAGGENPGKDMAALHNLQSMDWLFKKERIFLLAQFWQQRATLAENEVHTL
KEQLDSIKCQKGVKESNNNNNNNNNNINSTNSNHNINKSTNTESNNDVVDSSEGSTERTG
RSTPVEDIIQSKEKEVRGAASSSSASALSLMEAAEVSKLVEDISRLQAALSGVKEATAAQ
MHAMEEQLEEKNRLIQRLELKLQDSSLDEAKRDLQSIREARMVPEGLSLPPRSLESLLVD
RSKSEHDKIPTSEFGKQFHDVYGPLPPMSHSHLHPPLRPHLPPPLAPPPMASPLQPLAPH
PPPGTPLHHLLGEEWRRSLERSALDRHHLNSGQMSPDSGGGPVERSDSRESPIGDVSMKS
PSSMANGFPHETKSPFQPRDDRSPFKDEMPSMAFKFEDRITGESLIPKGDPMEARLQEIL
RFNMEKFCQQSLDTLCLARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKSWDKL
TEKGRDSYRKMHAWATDDNAVYLLKSLIPKKACRRKPETGLTLNGLLTGTHKDSSGAFRG
PDDSVTEERIQHILTEASRAMTSSTATSQAGQQDQDSRSTDSKSPASSTHSPSSPLSRGD
SRSRIRKYDNDDIPQEKVARIYQEELVKLMSRPQEPQIPLPRDPQYPGILFPFLGQSLLF
NRSHEEVKLALDAYHQELSKLQGNAAVSGMGLGAVGLGMGGGGGLGVGVGGPSLGMGVGL
GASGLHNGAQDLTMPKREQRNGDEEEEGRNPSVTSPFGPSRSKAETNLSSATTPLSNLVT
PITSIAATSGDDLSVSASPLQRMASITNSLMTGPPISTGSPLSQKPLKAVLPPITQQQFD
QYSNMNTEEIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREP
FIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYTAPPLYLVGGCPLPGGLAAPGCLPG
GLSTSGSPTLPSYTTGTSKPHHMKLPADIPKSMESPLPPVGIPPSLGGLPLPSHPMSFDA
RMPILDPLRKAGVGGPRVPGPAAPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKLFG
EAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDPRNLEKLQLLKNERREASK
RRRALDPTAEVSQDSQDIFQAPSPGGSSKKQRVLFSEEQKEALRLAFALDPYPNLATIEF
LAQELQLSTRTITNWFHNHRMRLKHPSSPGGGSSPNRDMQQPPANHPQGQSFDPIHFRLL
LSQRLMELRKEKGLPPTLPGLGPGLHPGLFSHFPHLGQQDLGNPRLDSLGGGLDLSMKGE
NDYDDASLVDEDSNMSGGMSPSGGGRSEGEDGDRDGRGAPSPLPRTSRRKPAAPQWVNPS
WASGEGGKEREVIINGVCVMQTDDYRLREQETVRIEPTPVDEANRNRSLKEEQEDENEEE
QQPASTHPPSPRPDTLTEPVTLQEEESSTLQEEPTPSQEAVKEETDEVEEEEA
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccaggccctgacgcccagggcggcgcagggggcgagaaccctggaaaggac
atggctgccctacacaacctgcagtccatggactggctcttcaagaaggaacgaatcttc
ctgctggcacaattctggcaacagagagcaacgttagcggaaaacgaagtccacacacta
aaggaacagctcgattcgatcaagtgtcagaagggcgttaaggagagcaacaataacaat
aataacaacaacaacaacatcaatagcacaaactccaaccataacataaacaaaagcaca
aacacagaatccaacaatgacgttgtggactcctcagaagggagcacagagaggacgggg
aggagcacacctgtcgaagatattattcagtccaaagagaaagaggttcgaggagccgca
tcctcaagttcggcgtcggctctatcgctaatggaagctgcggaagtgtccaagctcgtg
gaggatatctcccgcctccaagccgctctctccggcgtgaaggaagccacagctgcccag
atgcacgccatggaagaacagctggaggagaagaacagactcattcagcgcctggaactc
aagcttcaggactccagcctcgatgaagccaagagagatctacagagcatacgagaagct
cggatggtgcccgaaggcctcagtctaccaccccggtccttggagagtctgctggtggac
aggtcgaagtccgaacacgataaaattcccacctcggagttcggtaagcagtttcacgat
gtctatggtcctcttccacccatgagccactcgcatctccacccacctcttaggccacac
ctgccgcctccgctggcacctccgcccatggcatccccactccagcctctagctcctcac
cctccgccgggcacgccgctccaccacctcctgggtgaagagtggcggaggtcgctcgaa
aggtcagcgctagatcgccatcacctaaactcaggtcaaatgtcgcccgacagcggcgga
gggcccgtcgagcgatccgactcgagggaatcgcccatcggcgacgtgagcatgaagagt
ccgagctcgatggccaacggcttcccccacgagacgaagagccccttccagcccagggac
gaccggtcacccttcaaggacgagatgccctcaatggccttcaagttcgaggaccggatc
actggagaatcactcattccgaagggagatcccatggaagctcggcttcaggaaattcta
aggttcaacatggagaagttctgtcaacaaagcctggacacgctgtgcctggcccggcga
gtgcgcgaactcctctccattcacaacatcggacagcgactcttcgcaaaatatatcctg
gggctctcgcagggcaccgtctcggagctcctgtccaagccaaagagttgggacaaactg
actgagaaaggccgcgactcttaccgcaagatgcacgcttgggccaccgacgacaacgcc
gtctacctcctcaagtccctcatccccaagaaagcgtgccgtaggaaacctgaaacaggc
ctgacgcttaatggtctcctgacaggtacgcacaaggactccagcggagctttccggggc
cccgatgacagcgtgacggaggagagaatccagcatatcctgaccgaagcctcgcgcgcc
atgacctcctcgacggccaccagccaggcgggccagcaggaccaggactctcgtagcacg
gactccaagtctcccgccagctccacgcactcccccagtagcccgctgtcccggggagat
tcacggtcgcggatccgcaaatacgacaacgacgacatcccgcaagagaaggtggcaaga
atctaccaggaggaacttgtcaagctcatgtcaaggcctcaggagcctcaaatcccgctc
ccgcgagacccccagtacccggggatcctgttccccttcctgggccagtcgctgctgttc
aacagatcccacgaggaggtgaaactcgccctcgacgcctaccaccaggagctgagcaag
cttcagggaaatgctgccgtctcaggcatgggcctcggcgcggttggcctaggcatgggc
ggcggcggaggcctcggtgtaggcgtcggaggtccatcgctaggcatgggcgtgggactc
ggtgcgagcggcctacacaacggcgcccaagacctgacgatgcccaagcgcgagcagagg
aacggtgacgaggaggaggaaggacgcaacccgagcgtcacctcccccttcggacccagc
agatccaaggccgagaccaatctcagctcggccaccacgcctctgagcaaccttgtaact
cccatcacctccatcgcagcgaccagtggggacgacctcagcgtgtcggcgtcgcccctt
cagcgcatggcgtccatcaccaactcgctcatgacggggccgcccatttccaccggctct
cccctgagtcagaagcccctgaaggccgtcctgccgcccatcacacagcagcagttcgac
cagtacagcaacatgaacacggaagagatcgtcaagaaggtgaaagaacagctgagtcag
tacagcatctcacagcgactgttcggggaatctgtcctcgggctgtcccagggctccgtc
tccgacctcctggctagacccaaaccgtggcacatgttgacacagaagggccgagagcca
ttcatcaggatgaagatgttccttgaggacgagaacgccgtgcacaagctggtggcctcg
cagtacaagattgcccccgagaagctgatgaggaccggaggatacacagcccctcccctg
tatttagtcggtggttgtccactacccggtgggttagctgccccagggtgtctcccaggg
gggttgtccacttctggctcacctacccttccatcatatacaacagggaccagcaaacca
caccacatgaagcttcctgcagacatcccgaagagcatggagtcgcctcttcctcccgtg
ggcattcccccgtccctcggcggccttccacttccttcgcatcccatgtcctttgacgcc
aggatgccgattctagaccctctaaggaaggctggggtaggcgggccgcgcgtccctgga
ccagcagctccgtcagtgtatgagatggctgccctcacccaggaccttgacacacaggtc
atcaccaccaagatcaaggaggctctccttgcaaacaatattggccagaagttgtttggc
gaagcagtactgggcttgtctcaaggttcagtgtctgagctgctcagcaagcccaagcca
tggcacatgctcagcatcaagggacgcgaacctttcatccgcatgcaactgtggctcaac
gatcctcgaaatcttgaaaaacttcaactgctgaagaacgaacgacgagaagccagcaag
cgacgacgcgcgctggacccgacggccgaagtatcccaagactcccaagatatattccag
gcaccttctcctggtggatcatccaagaagcaacgggttttgttctcagaagagcagaag
gaggccctgcgcctggcctttgcactagacccctacccgaatctggcaaccatcgagttc
ctggcacaagaactccagctctccacacgcacaatcacaaattggttccacaaccaccga
atgcgactcaagcacccgagcagccccggtggaggaagctcacccaaccgtgatatgcag
cagccaccagcaaaccatccacaaggccagagtttcgaccccattcacttccgcctcctg
ctctcgcagcgactgatggaactgaggaaggagaagggcctgcctccaacgctacctggc
ctcggccctggcctgcatccaggtctgttctcgcacttcccacacctgggtcaacaggac
ctgggcaatccccgcctggactctctcggcggtggtcttgacctttctatgaagggagaa
aatgactacgacgatgcttcacttgttgacgaggattccaacatgtccggtggcatgagt
ccaagtggaggaggacgttctgaaggggaagacggtgatcgtgacggccgaggagccccc
tctcccctcccacggacctctcgacggaagcccgctgccccacagtgggtaaacccatcg
tgggcatcaggtgagggaggtaaggagcgcgaggttattataaacggcgtgtgtgtcatg
cagacagatgactatcgtctaagggaacaggaaacagtgcgcattgaaccaactccagta
gatgaagccaaccgcaaccgctctttgaaggaggaacaggaggacgagaacgaggaggaa
caacagccagcctccacacacccaccttccccgcggccagacacactgacagagccagtc
acattgcaggaggaggaatcctctaccttgcaggaagagccaacgcccagtcaagaggct
gtcaaggaggagacggacgaggttgaggaggaagaggcgtga
DBGET
integrated database retrieval system
