KEGG   Penaeus chinensis (fleshy prawn): 125032182
Entry
125032182         CDS       T08118                                 
Name
(RefSeq) flap endonuclease 1-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03030  DNA replication
pchn03410  Base excision repair
pchn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125032182
   03410 Base excision repair
    125032182
   03450 Non-homologous end-joining
    125032182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pchn03032]
    125032182
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125032182
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pchn04147]
    125032182
DNA replication proteins [BR:pchn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    125032182
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     125032182
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     125032182
Exosome [BR:pchn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125032182
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N HHH_5 DUF2458 Arm_4
Other DBs
NCBI-GeneID: 125032182
NCBI-ProteinID: XP_047479223
LinkDB
Position
2:39054619..39062308
AA seq 411 aa
MRVVARPLRPLASLLFRHLSPLSPVSRPQARTMGILGLSKLIADVAPSAIKENEMKNYFG
RKVAVDASMSLYQFLVAVRQEGNQLTSADGETTSHLMGFFYRTIRMVDNGIKPVYVFDGK
PPTMKGGELAKRAERREEAQKQLEKAEEAGNVEEIDKFSRRLVKVTKQHNEDVKKLLKFM
GIPYVDAPCEAEAQCAALAKAGKVYGVATEDMDALTFGTPVLLRHMTFSEARKMPIKEFH
LPKVLEELELSHDEFIDMCILLGCDYCDSIKGIGPKRAIELIRTHKSIEKIVTQLDKKKY
PAPEDWPFTEARRLFLEPEVKAAEEVDLKWNEPNVEELIKYMCEEKGFAEDRIRNGCKKL
TKARNTTTQGRLDSFFKVLPSPTSSNNKRKSNEKPGAAKKSKTGGSGKFRR
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgcgtgttgtggcgagaccccttcggcctcttgcgtccctcttattccgccatttatcg
cctctttctcccgtctcccgtccgcaggctcgcaccatgggaatattagggctctcgaag
ttaatcgctgacgtggctccgtcggctattaaggagaatgagatgaaaaattacttcggc
cgtaaggtggctgtggatgcctccatgagtctgtaccaattcttggtggctgtacgacag
gagggtaaccagctcacatcagctgatggggagactaccagtcacttgatgggattcttc
taccgcacaatccgtatggttgacaatggcattaagccggtgtatgtatttgacggcaaa
ccccctaccatgaagggaggggagctggccaagcgagcagagcggagggaagaagctcag
aaacagctggagaaagcggaggaagcaggtaatgttgaagaaattgacaagttcagccgt
cgcttggtgaaggtaacaaagcaacacaatgaagatgtcaagaaactgctcaaatttatg
ggtattccatatgtggatgctccttgtgaggctgaggctcagtgtgctgcccttgccaaa
gcaggaaaggtatatggtgtggcaactgaggatatggatgccctgacctttggcacaccg
gtgttgttgcgacatatgaccttcagtgaggcgcgaaagatgcccatcaaggagttccat
ttgccaaaggtcttggaggagctggaactctctcatgatgagttcattgatatgtgcatc
ctcctgggctgtgattactgtgacagcattaagggcattgggcccaagcgtgccattgaa
ctcatcagaacccacaagtcaattgaaaaaatcgtcacccagcttgacaaaaagaaatac
ccagcgcctgaggattggccatttactgaggccaggaggctgttccttgagcctgaggtg
aaagctgcagaggaagtggatctcaagtggaacgaaccaaatgtagaggagctgataaag
tacatgtgcgaagagaagggctttgctgaggacagaatacgcaatgggtgcaagaagctg
accaaagctcgcaacaccacaacacagggacggcttgactccttcttcaaggtcctacca
tctccaaccagctcgaataataagcgcaagtcaaatgaaaaacctggagcggcaaagaaa
tctaagactggaggtagtggcaagtttaggcgatga

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