Penaeus chinensis (fleshy prawn): 125032300
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Entry
125032300 CDS
T08118
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125032300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125032300
03009 Ribosome biogenesis [BR:
pchn03009
]
125032300
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125032300
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125032300
Pre-60S particles
125032300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
HEAT_2
TOR1L1_N
TPR_IMB1
Cnd1
Arm
Vac14_Fab1_bd
TPR_IPO5
HEAT_EF3_N
TPR_DNAAF5
IBN_N
HEAT_MROH2B_C
HEAT_GCN1_C
PDS5
MMS19_C
Adaptin_N
Ltn1_1st
TPR_TTI1_C
HEAT_GCN1_C_2
SCD
VPS15-like_hel
RTP1_C1
UNC45-central
HEAT_MROH2B_1st
Proteasom_PSMB
Motif
Other DBs
NCBI-GeneID:
125032300
NCBI-ProteinID:
XP_047479350
LinkDB
All DBs
Position
14:21462423..21508234
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AA seq
892 aa
AA seq
DB search
MGWNPDTDALAQILGLLRESQSPDTIVQQTVQQKLEELNKFTDFNKYLIYVLTKLTSEDE
PTRSLSGLILKNNVKAHFHQFPPDVAQFIKAECLSAVGDPSPLIRATVGILITTTASKGE
LSSWPELLPRLCEMLDSADYNVCEGAFGALQKICEDSAEFLEKSPDRPLDALIPKFLQFF
KHSSSKIRSHAIACVNQFIISKTQALMANIDAFLQNLFHLAMDDDPDVRKNVCRALVMLL
DAHISSLIPHMHNIIEYMMIRTQDPDENVALEACEFWLSLAEHPICKETLKPHLPKLIPI
LVRGMKYSEIDIILLKGDVEEDESVPDRSEDIKPRFHKSRHTIRHEPMENGGSGEEFPDD
ESDDGLDDDSSLSDWNLRKCSAAALDVLANVFRDDMLPVILPILKETLFHQEWEIRESGI
LALGAIAEGCMNGMTQHLPELIPYLISCLKDKKALVRSITCWTLSRYCHWAVVLPDHSYL
KPLMYELLKCVLDSNKRVQEAACSAFATLEEEACTELVPYLADILKTLVFAFRKYQAKNL
LILYDAIGTLADSVGNYLNKEEYIQMLMPPLIEKWNVLKDEDKDLFPLLECLSSVATALQ
SGFLPYCGPVYQRCVSLVEQTLNQTMAHAQNPEQFEAADKDFMIVSLDLLSGLAEGLNGH
VGQLVQQSNIMQLLYQAMQDPMPEVRQSSFALLGDLTKACFQHVAPCISEFMPILGQNLN
PELISVCNNATWAIGEISVKLGPEMRVYVNLVLTDLIFIINKPNTPKTLLENTAITIGRL
GYVCPNEVAPLLQQFIRQWCISLRNIRDNEEKDSAFRGVCNMISVNPGGVVEDFIFFCDA
IASWVNPKQDLKEMFHKILHCFKEQVGEENWKRFTEQFPPPLKERLTQQYGV
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaatccagatacagatgctttagcgcagattttaggattattacgcgagtca
caatccccggacacaattgtgcaacaaacagtgcaacagaaactagaagaactcaacaaa
ttcacagacttcaacaaataccttatatatgtcctcacaaaactaacatccgaagatgaa
cctacaagatccctaagtgggcttattttgaagaataatgtcaaggcacactttcatcag
tttccccctgatgtggcacagtttattaaggcagaatgtctatcagcagttggagaccct
tcacccctcatccgggcaactgtgggcatcctcatcaccaccactgcatcgaaaggagag
ctttcctcatggccagagctccttcctagactctgtgaaatgctggactcagcagattat
aatgtctgtgagggtgcatttggtgctctccagaagatatgtgaagacagtgccgagttc
ctagagaagagtccagacaggccactagatgctttaattccaaagttccttcaatttttc
aagcactcatcctctaagatcagatcacatgcgatagcctgtgtcaatcagttcattatc
agcaaaacacaggcactaatggcaaacatagatgctttcttacagaatttgttccatttg
gccatggacgatgacccagatgtccgaaaaaatgtatgtcgagcccttgttatgctcctg
gacgctcacatttcctccttgattcctcatatgcacaacatcattgaatacatgatgatc
agaacacaggatccggatgaaaatgtagccttggaagcttgtgaattctggttgtcgttg
gctgaacatccaatctgcaaagagaccctgaaaccacacctaccaaagttgatacccata
ttagttcggggcatgaagtactctgaaatagatatcatccttctcaagggtgatgttgag
gaggacgagagtgtaccagaccgtagcgaagacattaaacctcggttccacaaatctcga
cacacaatccgtcacgaaccaatggagaatggaggtagtggtgaggagtttcctgatgac
gagtctgatgatggtctagacgatgattcttctttgtcagattggaatttgagaaagtgc
tcagctgctgcgttagacgttcttgccaatgtgttccgagatgatatgttgcctgtcatc
ttgccaatattaaaagaaactctcttccaccaagaatgggaaattagagaatcaggtatc
cttgcactgggagcaatagcagaaggttgtatgaatggcatgacccaacatctaccagaa
ctgatcccatacctgatcagctgcttgaaagacaagaaggcactggtccgctccatcacc
tgttggacgttatcccgctactgtcactgggcagttgttctccctgaccactcctacctc
aaacctctcatgtatgagctgctcaaatgtgtcttggacagtaataaacgtgtacaggag
gcagcatgttcagcttttgctacactagaggaagaggcatgcacagagttggttccatac
ttggcagacattctgaagactttagtatttgcatttagaaaatatcaggcaaagaatctc
ctgatactatatgatgccattggaaccttggcggactctgttggaaactatctcaataag
gaagagtacattcagatgctcatgccaccattgattgagaagtggaatgtactcaaggat
gaggacaaggatttgttcccacttctagaatgcctgtcaagtgtggcaactgctctccag
tctgggttcttgccctattgtggtcctgtgtatcaacgctgtgtctcacttgtggagcag
acgcttaaccagaccatggcacatgcacagaatcccgagcaatttgaagcagcagacaag
gacttcatgattgtctccctagatctgctctcagggcttgctgagggtctcaatgggcat
gttggtcagctggttcaacaatccaacattatgcagctcctttaccaggccatgcaggac
ccaatgccagaagttagacaaagctcctttgcacttctgggtgacctgaccaaagcatgt
ttccagcatgtggctccttgtatatctgagtttatgccaatccttggtcagaatttgaat
ccagaattgatatctgtctgcaacaatgcaacatgggctattggagaaatatctgtaaaa
ttaggacctgaaatgagagtttatgtgaaccttgtcctaaccgacctcatcttcataatc
aacaagcccaatactcccaaaactcttcttgaaaacacagccattacaattggacgccta
ggctatgtgtgccccaatgaagtggctcccctgttgcaacagtttatcaggcagtggtgt
atctccctacgcaacattcgagacaacgaggagaaggactctgcctttaggggtgtatgc
aacatgatcagtgtgaatccaggaggagtggtggaggatttcattttcttctgcgatgcc
attgcctcgtgggtcaaccccaagcaagatctcaaggagatgttccataagatccttcat
tgcttcaaggagcaagtaggcgaggagaattggaaacgtttcacggaacagttcccacct
ccattaaaggaacgcctgacccaacaatatggagtgtga
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