Penaeus chinensis (fleshy prawn): 125032539
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Entry
125032539 CDS
T08118
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
pchn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125032539
03015 mRNA surveillance pathway
125032539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125032539
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125032539
mRNA cycle factors
P-body specific factors
125032539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
125032539
NCBI-ProteinID:
XP_047479686
LinkDB
All DBs
Position
14:complement(15328644..15337303)
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AA seq
564 aa
AA seq
DB search
MTVKANEGSKRDHPKSYNDHSNKRSVDNKQNAKTKKEKTTSPLTKVVVRRLPPAMTEEEF
LEVVSPLPDHDYFMFSFTDSSLGAHAYNRAYINFKNVDDVYTFRDRFDGYVFVDQKGDEY
PAMVEFAPFQKIPKRSGGKKKDARCGTIDEDPDFLAFMESLTNPTPVTLPNLEAVLEEIQ
AYDRELKSNNGVMKVKTPLLEFIEQKKAEKLRNKEEKKEERRRKEFERKKAREEEKRKKK
EGKEHHRETKKREDHKDSKDHRDDSCVKVLRPERIKDEHAPEGKQEKSRTERDKERAERE
KEKQRRRDEDRQRQREREREKRDKERMLRKEREKEERIRRQEERMKMKEEEMGRHKEEGK
EDWTEDKPHVSKTEGTRSKRYSEGRRKEERERERKFKEQNDREKKAKDNADAEVKSQADE
KDGKKVVVATKAQEEQGQSSEKCEEKKVGKMVDKQEDVERQVEKQPRKRREKDPRVERRI
RNKDRPAMALYRPGQSRLSSGHSRSEKEDGGDTCSSSPSPVMLQGDSNVFFGQGSKDEPE
EPRIQEDLNGVKNEVNGESDLGIL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaaagctaatgaagggtcgaagagagatcaccctaagtcctacaatgatcat
tctaacaagaggtcggttgacaacaagcagaatgcaaaaactaaaaaggagaaaactacg
tcgccgctcacaaaggtggtagtgcgtcgccttcccccagccatgacagaagaggagttc
ttggaagtggtgtcgccattgccagaccacgattactttatgttctctttcacggatagc
agccttggagctcatgcgtacaatagggcatacatcaacttcaagaacgtagatgatgtg
tatacgtttagggatagatttgatggctatgtctttgttgatcagaaaggtgatgagtat
ccagccatggtggaattcgcccccttccaaaagattccgaagcgctcgggcggaaagaag
aaggatgcaaggtgcgggactatagacgaggacccagatttcttggcgtttatggagtca
ctcaccaaccccacgccggtaacactgcccaatttggaggcggtgttggaggagatccag
gcgtacgacagggagttgaaatccaacaacggtgtcatgaaagtgaagacccccttgctg
gaattcatcgagcagaagaaggcggagaagctgcggaacaaagaggagaagaaagaggag
cgtagaaggaaggaatttgagaggaagaaggcgagggaagaagagaagagaaagaagaag
gaggggaaggaacaccacagggaaacgaagaagagggaggatcacaaagattcgaaagac
cacagagacgacagctgcgtcaaggtgctgagaccagaaagaataaaggatgaacatgca
ccagaggggaagcaagagaagtcacgcacagaacgagataaagagagggcagagagggaa
aaggagaagcagagaagaagggacgaagatagacaaagacagcgagaaagagaaagagag
aagagggacaaggagaggatgttgagaaaagagagagaaaaagaagaaagaataaggagg
caggaagaaagaatgaaaatgaaagaagaagaaatgggcaggcataaagaagaggggaag
gaggactggaccgaagacaagccgcatgtaagcaagaccgaaggaacgaggtccaaacgc
tacagcgaagggagaagaaaagaagagagagagagggagaggaagttcaaagagcagaac
gacagggagaagaaagcaaaagataatgccgacgctgaagttaagagtcaagcagatgag
aaggatggtaagaaggtggttgttgcaaccaaagctcaggaagagcaagggcaatcctca
gaaaaatgtgaagagaaaaaagttggaaagatggtggataaacaagaggacgtggagcga
caggtagaaaagcaaccacgcaaaagaagggagaaggaccccagggttgagagaaggata
agaaataaggatcgaccagccatggcactatataggcctgggcaatcgcgattgagctca
ggccactcaagatctgagaaggaggatggaggcgacacttgttcatctagtccaagccca
gtcatgctgcaaggagattcaaatgtgttctttggccaaggaagcaaggacgagcctgag
gagccaagaatacaagaggatttgaatggggtgaagaatgaggtcaatggggagtcagat
ttgggtattttgtag
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