Penaeus chinensis (fleshy prawn): 125032794
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Entry
125032794 CDS
T08118
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125032794
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
125032794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
125032794
NCBI-ProteinID:
XP_047480125
LinkDB
All DBs
Position
15:4130409..4142328
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AA seq
769 aa
AA seq
DB search
MPNTCRTCGGSSFTVDCAVKMCDQCGTEQTNYAEYMSQEIFTEVDRSRYASQIADERDDA
DSVDSKPKEALQNDWTSYEAFNIVLFEWTQALRASGASKDFQEIVFRLWVTYLQRMEVAF
MPLEGNKDFKPKASIMESMRDVQLIHSGQEQVVSTFSKRQRKTPNKEESLDRLKKKVENR
KLRKMNENALSKYLALEMSKSIIDMAEESSDAESGIGVTNGSKRGIKRKNRSACSSIAED
DTLEGKTSAQSLASCSIAGDDVSEAKDSVDNFKTPVLCHNSFISKHVSKYRKEKDLQDEK
TNGADKAHTAASKSFPMTKLYIQGSMPFHLNYKKLLGLLYLAVLLSEEEILLMDIIRWCR
EGHIPYVSAQNLLKEDMKMIREDMGVFRKMVVPTADAIQEVAGKMAAFLSIQYIPLPRED
MIIERIVESLRLPEAVSSMAKDLVHHSRCKIDYTFCLRVPDLEAIAMASVISVVKLCCGL
DGSQEVRLSQAAKIMNEHHKDKPAWTHLFSWEEWERHMSSLVWFCSQVDAVFAHHFKSFG
TGGVNAKILSQFYWEEGIWRTPKTITNYGHNEAAYKIIEKFLDFQGKPLEDMVDQNTVLR
MSRSPFMDIVSNFLVKFKDDKDKSIQQLVKIGRRLQRKSFKTQKINWAADLKNVQAKLAK
CGSNLTLQPQTLLDHKDNHNKNNKSSNSKIHSKSNIDLENPILDESEQKLLIPQPHRNIW
RANWTHKNRVEAWNSCPATYKWIINLGSLMIETHRNRLLYYIEIFEKLR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacacgtgccgtacctgtggggggtcctccttcacagtggactgtgcggtcaaa
atgtgcgaccagtgtggcacagaacaaacaaattacgcagagtacatgagtcaggagatt
ttcacggaagtggatcgctcccgttatgcgtcacagattgccgatgagagagatgatgct
gattcagtggactctaaacctaaagaggcacttcagaatgactggacatcatatgaagcc
tttaacattgtcttgtttgagtggacacaagctttgcgtgccagtggggcttccaaggac
tttcaggagatagtgttcaggctgtgggtcacataccttcagcgtatggaagtggctttc
atgcctttggaggggaataaggacttcaaacctaaggcgtccattatggagagcatgaga
gacgtacagctgatacacagtgggcaagagcaggtagtttcaaccttttccaaacgccag
cggaagacccccaataaagaggagtcattggataggttaaagaagaaggtggaaaacagg
aaattaagaaagatgaacgagaatgccctgagtaaatatttagctttggagatgagcaag
tcgatcatagacatggcagaagaatcgtcagacgctgagtcggggattggcgtcactaat
ggcagcaaaagaggtataaagaggaaaaacagatcagcttgcagcagcattgcagaagat
gatacgttggagggcaagacaagtgcacagagcttggcaagttgcagcattgcaggagac
gatgtttcagaggccaaggatagcgttgacaacttcaaaaccccagtcctttgccacaat
tccttcatcagcaaacatgtcagcaaataccggaaagaaaaggatttgcaagacgaaaaa
acaaacggcgctgacaaggcacacactgctgcatccaaaagctttccgatgacaaagctc
tacatccagggcagtatgccattccatctgaattacaagaagctcttgggtctgctgtat
cttgccgtccttctatcagaggaggagattttgctgatggatattatcagatggtgccga
gaaggccacatcccctatgtgtcagcgcagaacctgctgaaggaggacatgaaaatgatc
cgggaagacatgggagtgttcaggaagatggtagtccccacggcagatgcgattcaagaa
gttgcagggaagatggctgccttcctttcaatccagtacataccactccctagggaggat
atgatcattgagaggattgtagagagccttcggttgccagaggctgtgagctccatggcc
aaagacctggtgcatcacagcaggtgcaaaatcgactacactttctgcttgcgtgtcccc
gacttggaagcgattgccatggcttctgtaatatccgtcgtgaaactgtgctgtggcctt
gatggctctcaagaagtaaggctctcacaagcagctaagattatgaatgaacaccataag
gacaaacccgcctggacacatctcttttcctgggaggagtgggaaaggcacatgagttct
ctggtgtggttttgtagccaagtagatgcagtatttgcacaccatttcaagtcatttggc
actggaggagtcaatgccaagattctttctcagttttattgggaagaagggatttggaga
acaccaaagactattacaaactatgggcataatgaagctgcttacaagataatagagaag
tttttagacttccagggaaagcccttggaagatatggtagatcagaacactgttttaagg
atgtctaggagtccttttatggatattgtgagcaatttcttggtgaagtttaaggatgac
aaagataaatccattcagcagttagttaagattggcaggagactgcagaggaagtctttc
aagactcagaagataaactgggcagctgatctaaaaaatgtccaggcaaaattggcaaag
tgtggctctaacctcactctgcaacctcagactcttttggaccacaaagataatcacaac
aagaataataaaagctctaattccaaaatccattccaagagtaacatagatctggaaaat
cccatattggatgaatcagaacagaagcttttgataccacagcctcacagaaatatctgg
agggccaactggacacataaaaatcgtgttgaagcatggaattcctgtccagcgacttac
aagtggataatcaatcttggcagcctgatgattgagacacatagaaataggctattgtat
tacattgaaatttttgaaaaacttagatag
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