Penaeus chinensis (fleshy prawn): 125032957
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Entry
125032957 CDS
T08118
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125032957
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pchn04812
]
125032957
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
125032957
Membrane trafficking [BR:
pchn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125032957
Cytoskeleton proteins [BR:
pchn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
125032957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_22
AAA_5
MIT
Mg_chelatase
AAA_14
AAA_16
AAA_2
NPHP3_N
IstB_IS21
nSTAND3
DUF815
AAA_33
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
125032957
NCBI-ProteinID:
XP_047480322
LinkDB
All DBs
Position
15:complement(8573725..8698463)
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AA seq
717 aa
AA seq
DB search
MSSSDGAHSLRRHPLRSPKKTKKTDDKGGKSPNLSVHNKNFYIASYPVVLVFNILRTVLY
HLFLLLKTLFRASSYLAQARTDTAAPTSVVITEIDSCGGVGSGGSGGGQGQVEEQSQQDE
VCVPLIGEMPPKPGNPGPGDPLLAKQKHHHRKAFEYISKALKIDEENEGSKELAMELYRR
GIGELESGIAVDCLGRGEAYERAQRLQEKMRTNLIMAKERLDMLESLVHLQQLELDVPLL
TTLTPPVSSAPQVTHGPSRNIIGARAVSPCRRGFTNQSSAHTNKPRARVAPQVMSLTDSG
RNSSERRNGPSLSNKASEDAKTFKKIPTAKRISTLSNKSQTLPRNMGSRAITKSRDGKHP
GTPPSVRRQLSNQNGSNSANSSPMKRRGSAGCGLSGNGGGNGTPKHTPSHRRSASASMKG
VDGKMAQGIMDEILDSAPTVSWDDIAGQEVAKKALQEIVILPNLRPELFTGLRAPARGLL
LFGPPGNGKTMLARAVASESSATFFNISASTLTSKYVGEGEKLVKALFSVARELQPSIIF
IDEIDSLLCERREGEHEASRRLKTEFLVEFDGLKSDAEERILVMGATNRPHELDDAALRR
FSKRVYVSLPDKSTRALLIQKLMDKQKSQLNVREMESLASLTDGYSGSDLTSLAKDAALA
PIRELKPEQVVSCDPAEVRGINLSDFKESLKKIRRSVPQSTLINYEKWNADYGDIST
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcagtgatggcgcccattcgctgaggaggcatccgctccgctctccaaagaaa
accaagaaaaccgatgacaagggcggtaaatcgccaaatttgagtgtacacaacaagaac
ttctacatcgcgtcctaccctgtggtcttagtgttcaacatcctccgcacggtgctgtac
cacttgttcttactgctgaaaacgttgttccgagcgagctcgtaccttgcccaggcgcgg
acagacaccgccgcgccgacctcggtggtgataacggaaattgacagttgtggaggagtg
ggcagcgggggcagtggcggcgggcaagggcaagtagaggaacagtcgcagcaggacgag
gtgtgcgtgccactcataggggagatgccgcccaagccaggcaacccggggccaggagac
cctctcctcgccaagcagaagcatcatcatcgcaaggcctttgagtacatctcgaaggcg
ctgaaaatcgacgaggaaaatgaaggatcgaaagagcttgcgatggagctgtaccgccgg
gggataggcgagctggagtcgggcatcgccgtggactgcctggggcgcggggaggcgtac
gagcgggcccagaggctgcaggagaagatgaggacgaatctcatcatggccaaggagcga
ctcgacatgctagagtcgctggttcacctgcagcagctggagctggatgtgcccctcctc
actaccctcacccccccagtatcctctgctccccaagtcacccatggaccctctcgcaat
ataataggggccagagctgtctccccttgccgtaggggttttacaaatcagtcatcagct
cacacaaacaagcctcgtgcccgtgtagcaccacaggtcatgagtcttacagattcgggg
agaaactcttcagagcggcgaaatgggcccagtctctcgaataaagcctccgaagatgcc
aagaccttcaagaagataccaactgcaaaacgtatttccacgctaagcaacaagagccag
accctcccacgtaacatggggtctcgagccatcactaagagcagagatggcaagcacccg
ggcactcctcctagtgttaggaggcagctgtcaaaccagaatggtagcaactccgccaac
agttcgccaatgaaacgtcgagggtccgctggttgtggcttgagtggaaatgggggaggt
aatggaacaccgaagcacacaccatctcacagacggtctgcctctgcttctatgaaggga
gtggatggtaaaatggctcaaggcattatggatgagattttagattctgctccaaccgtc
tcctgggatgacattgctggacaggaggttgccaagaaggccctccaggaaattgtgatc
ctgccaaacctccggccagagctcttcacaggtcttcgtgctccagccagaggtcttctc
ctctttggtcctcctggaaatgggaagaccatgctggcccgagcagttgcaagtgaaagc
tcagcaaccttcttcaatatcagtgcatcaacattaaccagtaaatatgtgggagaagga
gaaaaattagtgaaagctctcttctctgtcgcacgggaacttcagccctccataatcttc
attgatgagattgactcacttctatgtgaaagaagagagggtgagcatgaagcttcaaga
agactcaagacagagtttctagtagagtttgatggccttaaatcagatgctgaagagaga
attctagtcatgggggcaactaatagacctcatgagctagatgatgctgccctcaggcgg
ttcagcaagcgtgtttatgtgtctttgccagataaatctacacgtgcgttgctaatccaa
aagttgatggataaacaaaaatctcagttgaatgttcgtgaaatggaaagtttagcctcc
ctgacagatggttattcggggtctgacctcacctctttagcaaaagatgctgctcttgca
ccaatcagggaactgaagccagaacaagttgtatcatgtgatccagctgaggtccgcgga
attaacctgtccgacttcaaggaatcactcaaaaagattcggagatcagtcccacagtcc
acacttatcaactatgagaagtggaatgcagattatggagacatatctacatga
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