Penaeus chinensis (fleshy prawn): 125033169
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Entry
125033169 CDS
T08118
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125033169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125033169
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
125033169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
125033169
NCBI-ProteinID:
XP_047480476
LinkDB
All DBs
Position
16:complement(6585782..6601940)
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AA seq
722 aa
AA seq
DB search
MPPKAQPGEGIVVVLDVGPGVRASTETSFFSQAKKCLTNILQRKMFAEKCKDQVGVVLFG
TDGTDNNLASGDQYQHITVLREIMTVDWDMMNEVDQVPFGKARADWLDALVVAMDLMHDP
DGMRYSSKKIVLMTDFSGEFSDDQASKIIAGLNNSGIELSVIGPEIVDEDNSDDDDMDGP
GSSNGAPKSGNPMNWNGKPKSAIQLAGEALITRIVSEVDGIICSFDEAIPQLIFFQKKSA
GSANWNTVLDIGPDFQIAITGKIKVKHSTVPTWKKMHAHDETAAIISETSYHRHDDAQTA
VDEAEVIMGYKYGTTLVPFSDEDAQMKFSSDSPRALSVLGFTRSSNVCHNRRAGDQVLVV
TAREGDETAAVALSSLIQALVELDMVAITRRIYNKNSNPVMGVLFPEVTKKYECLIWIPL
PFQEDIRLFTFPSLQRLTEKLAEKEKQAMDDLISCMDLSGHDDDEEELEPTTVLNPQLQH
YYNVLTHRAIHPHDPLPPPADHVLNILKPPESLCEGRDRVAPALQTAFPTKRVVKKTKDK
ADLFSSDSHADKKIKLGDDDNVNAGDLTRPLVTKVTSTTPVQDFMALLAGEAPNFNLICS
QLGDVVMQLLDSIGGGGATSAAVTTKILDCLENFRRESCGIDPAVYNKFITSMKDTVTTR
SLNEFWSRVKEGNYGLISSNENMRSTVSAEEAEAFWQVEVEMQAPPPKPEASDDMEDLLD
DL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgaaagcacaacccggggagggtattgtggtggtcctagatgttggtccaggt
gtgcgggccagcacggaaacaagcttcttctcacaggcaaaaaaatgcttaacaaatatt
ctgcaaaggaagatgtttgcagaaaagtgtaaagatcaagtgggtgtagttttgtttgga
acagatggtacagacaataatcttgccagtggagaccagtatcaacatattacagtccta
agggaaataatgaccgtggactgggacatgatgaatgaggtagaccaggtgcctttcggg
aaagccagagcagattggctggatgccctggtagtggcaatggaccttatgcatgatcct
gatggaatgcgatatagcagtaagaaaattgtgttgatgacagacttcagtggagagttc
agtgatgatcaagcatccaagattattgctggcctcaacaacagtggcattgaactgagt
gtcataggaccagagatagtagatgaagacaacagtgatgatgacgacatggatggaccc
gggagctcaaatggagcaccaaagagtggtaatccaatgaactggaatggaaaaccaaag
tctgccattcaattagcaggtgaagccctgattaccaggattgtgtctgaggtggatgga
ataatttgcagttttgatgaggccatcccacagcttatcttcttccagaaaaagtcagca
ggtagtgctaactggaacactgtcctggatattggtcctgacttccagatagccattaca
gggaaaatcaaggtcaaacattcaactgtcccaacttggaagaaaatgcatgcccatgat
gaaacagcagctatcatcagcgagacatcttaccatcgccatgatgatgcccagacggct
gttgatgaagcagaggtcataatgggttacaagtatgggacaacattggttcccttttca
gatgaggatgctcagatgaagttctcatcagatagtccacgtgctctgagtgtcttagga
tttacacgctcatccaacgtgtgtcataatcgtcgagctggagatcaagtgctagttgtg
actgcacgagaaggagatgagacagcagccgtagctttgtcgtccctcatccaggcgctg
gtggagttagacatggtggccatcacaagaaggatttacaacaaaaattctaacccagta
atgggagtcctattcccagaggtcacaaagaaatatgagtgccttatctggatcccactt
ccattccaagaagacatcagactgtttacatttccaagtttacagcggttgactgagaag
ttagcagagaaagagaaacaagcgatggatgaccttatatcttgcatggatttgagtggt
catgatgatgatgaggaggagctagagccaactacagttttgaacccacagctacaacac
tattataatgttctgacccatcgtgccatccaccctcatgatccacttcctccacctgct
gatcacgttctgaacatcttgaagcctcctgagagtctatgtgaaggtcgggatagagta
gctcctgcacttcaaactgctttcccaactaagagagttgtcaagaagacaaaggataag
gcagacttgttttcaagcgacagtcatgctgacaagaaaataaagttaggtgatgatgac
aatgtaaatgcaggtgacctgactcgacccctggtaactaaagtgacttcaactactccc
gttcaggacttcatggctcttcttgctggagaagctcctaacttcaacctcatttgcagt
cagcttggagatgtggtgatgcaattgttagatagtattggtggtggtggtgctaccagt
gctgccgtaaccaccaaaatcttggactgcttggagaacttccgtcgtgagtcatgtggc
atagatcctgcggtatacaacaagttcattacctctatgaaggacacagtaacgacaagg
tcattgaatgaattttggagtcgtgtcaaagaaggtaactacggcttaatctcaagcaat
gaaaatatgagaagtactgtcagtgcagaggaagctgaggctttctggcaggtggaggtt
gagatgcaggcaccacccccaaaacctgaggccagtgatgatatggaagatctgttggat
gacctgtaa
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