Penaeus chinensis (fleshy prawn): 125033308
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Entry
125033308 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC125033308
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125033308
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125033308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
DUF547
Sulf_coat_C
DUF5917
Motif
Other DBs
NCBI-GeneID:
125033308
NCBI-ProteinID:
XP_047480646
LinkDB
All DBs
Position
16:36615988..36630661
Genome browser
AA seq
3066 aa
AA seq
DB search
MKDTAGGCGPLLRFLFQYEDRIQKEIFSIFNQEETDTTKSHVSLSDETRTALRDKLLSHP
HETSCILHELVVRNRILRERGGDHDNVSEAENKDADGEEKGSRELSKKKSHCTFGDILKE
CLDHCVRRVESLDDKLKAMEEDYVSAMSRPKKNFSPKKLSFGMPKNGASESVEVAKLLER
SQATETEKQRNEALLYKILSLSSDAPLSYLCELFPRMLRLCYEKNLLASNKLHFSNLSSS
ETCLRLFCEMEGEYLSSSSRINKASLVERLPSFTPTDVREMFLSCAANSKHVLQLIFEGL
VVDGVKSMKEMEGCDTENWILTLWPIIFLHAWSTSVDKMESLIWISAVWENHPRNIDPLL
FDICSDLNRDMDLVRWCLTRSTSVKILPLLQLIRNHSPLFTLHKSLPLHTLWPEEVLHLL
DEHSKARDPSGTLSSSCQSTYKAFCILLSVFQVIGSGMQLDNAVAGRQARGKLHGDKGQI
FGRSTDMNSEGISNYRDRQAPLQFYQQNILEKLQEVRRMIDELKPLECRVEVMENIFSLL
FVRHSDMSDEGQSESGGEEGELERSFLSQQTDVESLASTSHAFIDLHLNPAASAGDKEKE
QSTKKVKKVLDFADQVVLEESSSETVNLSVRELSPFGSASEEEKTSGSSTEANSKDLKAT
ESSEASKIHGSSWPPAGSERLTWDTHQQSPQSGPTCHHQSSCTVSGKSTGSSMGELPHTG
YLINSLVAWDILLLLRDSILTASAQTYTEIGQQAETKESCSRKKVQVRLSSLSRLISEGL
WRMQVIAPYSRKFGSVENFDDFLDGTLISGNTGYTVYENSMQTSAKSKVPNPGQTSNSQG
MKKRHGKEHELTELTTGLQDHTSVITYLLAPPSSLITLALANGNVTRAEQVVKMYKVVDS
TEKREVCLTNRLSQLRPKLSLTSQKSGKLKESKGVQHKGYSKDLIQNIGLLAREGSAQVS
TTNLIHDLVTSTPPPIPQCLSTKVIEGSCQIASSFLSPQALVLADLALTVDLTETTASYL
MEQALQRSVSQPSVPSSLPKTIGSIQGYIPVLQKLASMCSTLIAVRTLECESDSDGANKN
PSADTSAYACPFSATPMSLMLSPLPLGESELKNYVKAWSKFLECFAATQDTLLWFDDSDN
VDSSINIHIHSGKNRAHMSYKLLLQILSEKANHLYRSSIKECQETKMGAFVRTFYQYLQL
MSAMVTLHADEKYHNSMKSYFSLLKQRPVHILGSLMFQEGVDPVKLEPIAARMRLNLTAM
ILQYCCPKITVSYEFLYRRGHDTEVRDVASRLGFQASQGQVIMNSRTIEGTSAVYGEVIV
RDILTSLLSGLKEAIQPQAFTFTHCHKAVILNDATAPHALLSIDIQEALNDTSELAAMDF
TKIPPNEEAVVFFINLANLMYIHAGLLNHILYPKSKSGESRGIFSSYLIERLMAMKHLGY
NLGQLGFLSLHDVLFGVLQLQNPLSSLLIQNEENVRVSLCESTVIKSSLQHDNAEKLKHI
SGLITAFPSKLSFCITQGNPVSPLVQVIYADRLEEHIEAAVSEHLNMFSLVKESCSGNAD
GEIDHPHGTQKVNMCVSRTILNYVARHCNGTFDGMSSLMQEVNEEVASFFNKPDAGISSK
KQIEISVLDNNEDQGIAVEYVEHLVNQEFAMTHNISETIVSPAVSDGLDWTSVKVPPTVL
SHLRRQCPLLAFIVQALHSALEMKRQKGHSWADDETDAWHKILYPPERGVKPQHDETHHF
KACKNVFTNSRYKALGRISQDSNVLSALLIDPDISSIWSLADQLLGSQTITKDCTMERQS
NVNSLMTVLQALPTATMEAHPNLQSLLDQLLVFMVQTSDVSGKLVVTLVTDEFILTQFLQ
LSDLKPWMYAYHILDCNVRYTTIQEAHKVTHLLRPIDRYSYELVFILTKVLHYRSWPASA
AVDHLNIMVYDSRLPRHKQEWAQNKAVQIRVYEEILRVGNPEVSSWQEIEKMSEEEPAVL
LQMLLQKKQFKLGVQWAEHHNVSPELRRLVDQSYLMSVLDKTNPEYGTALEALHALSSND
LVIVIQALLDRLSSPPTRRFLIEFLLKTQFTSEAVSLYKDNNELSGKENEEGITPSTVPP
SIALPNLSDLQQEVMGLILVEDIAPHADDRFQLSHLASTPHLIIEQWLMNIKLEAVEKAI
KTLSQHLDMVDSRMSSSIHSQDFGISSLCKEAGVQKREPQSLSWDVLNWLLEAYAAKALD
TTGVQVTLKPQTLNENVPKKFVMPARPPERHEWIPDAEVRECPICRVAVFSMFCRRHHCR
RCGRVVCGSCSKARIVVQGYGDLQVRVCIECYQQTKNLNLEDYIQVRPLGDGTYDTVSQS
SEGLVSARGGGGSSCTSDTEGGWYLSTDPDHNALVRQEFCYDYAPSLSLCLAILAQHQDH
KRAAVCIVKLCHHLFSLIVSSIKSASPEVDNTFVLSMIQTLLASSKVRFGNIGEHQGIAL
CEYYTQWVDLIALLSKANCGYIIPIPSLQNMLQIGELHRKNLMGEDKLKEKLERCLQQEF
VHMRHLRDMLVKKQLWELALNISTKAGLEATGVWGAWAMASLKAGDFPGARERFSRVLER
PFDKRRPCRSSLLPEVIKYLESNPFSVDQKVMEQAERARATIMMNDQSRLPPSQALVVLH
SLQELNGISNGLLTNRESNKQIFSSHRTKKKNNSKMDSLFQTECKYYLCLYGNHRMTIQY
FMRNKQLQECVNYLLSEEIEVDLFVHEVLVPILRCGQLDMLLRNFRAIDPKQEKWAKYML
GGCRWLERQGWWNSLLAVQEALGDRLRAAMTLLRMYSHTVDSYNGLANRVHHLLAAKSHL
QAYLDTQALHQSSAKKKKIILKHVRMASKQHINTLTLQADVTKFLANCEAKGNMLCSLLH
NLHKMKVLGNISLPTLLGDEEERLAVASLAICSAQSVADGLSLAYRVVEGSGISTEKLLS
VVSQLLVAHEQYSTVGQVVRGMQEWGVLKAKTIDIALQPALLATASSTQNTHLDSLVKLL
SSDSAKIEAYIKCGRLKSAYLVAVHRGRHEDVVKVQEVAKSNGQAHVATMCSKWLANYEN
RVSARM
NT seq
9201 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacactgctggagggtgtggacccctgttgaggttccttttccagtatgaagac
cgaatacaaaaggagatttttagtatattcaaccaggaggaaacggacaccaccaagagc
catgtatctctgtcagacgaaacaagaacagccctcagggacaaacttttgtcacatcca
cacgagacctcttgcatcctgcatgagcttgttgtcagaaacagaatcctcagagaaagg
ggaggggatcacgataatgtgtctgaggcggagaacaaggacgcagacggcgaggagaaa
ggttcacgggagttgagcaagaagaaaagtcactgcacattcggagacatcctcaaagaa
tgcctcgatcactgtgtccggagagtggagagcttagacgacaagctaaaagcaatggag
gaagactatgtcagtgccatgagtcgtccaaagaagaatttctcccccaagaagctatcc
tttggaatgcccaaaaatggggcatctgagtctgtggaagttgcaaaattattggaaagg
tcacaggccactgaaacagagaaacagagaaacgaagccctgctgtacaaaattctttca
ctatccagtgatgctccactttcttatctttgtgagttatttcccaggatgcttcgactc
tgttacgagaaaaacctgctggcatccaacaagcttcacttttcaaacctctccagttca
gagacgtgcttacgactcttttgtgagatggaaggagaatatctcagcagtagctctcgc
atcaacaaggctagcctagttgaaaggttaccatcctttacccccacagacgtaagagaa
atgtttcttagttgtgctgctaattcaaagcacgttttgcagttgattttcgaaggcctt
gttgttgatggtgtgaagagcatgaaggaaatggaaggttgtgatacagaaaattggatc
ttaactctgtggccaattatctttttacatgcttggtcaacttcagtagacaagatggag
agtctcatctggatttctgccgtttgggagaatcatcctaggaacattgatccccttctc
tttgatatctgcagcgatctgaatagggacatggatctcgttcggtggtgcttaacgcgt
agtacgagcgttaaaattttgccacttttgcagctgataaggaatcattcacctctgttt
acactccacaaatctcttcccttgcacacattgtggcctgaggaggtgctgcatcttctt
gatgaacacagcaaagccagagatccaagtgggacacttagctcttcatgccaaagcaca
tataaagccttctgcattttactgtcagtatttcaagtaattggttctggcatgcagctt
gacaatgctgtcgctggacggcaagcacgggggaaactgcatggtgacaagggacagatc
tttggtaggagcacggatatgaacagtgagggaatctcaaactatcgggacaggcaggcg
cctctccaattttaccagcagaatattttggaaaagctgcaggaagtaaggagaatgatt
gatgagttaaagcctttggaatgcagagtggaagtgatggaaaatattttttctctcttg
tttgtccgtcatagtgacatgagtgacgagggacagagtgagtctggtggggaagaaggg
gagcttgagcggtccttcttgtcacaacagacagatgtagagagtttagcaagtacttca
catgcttttattgatctacacctgaaccctgctgcatcggctggggataaggagaaagaa
caaagtacaaaaaaggtgaagaaggttttagattttgcagatcaagtagtccttgaggaa
agttcttcagagacggtgaatctctctgtcagagagctgtctccttttggcagtgcttca
gaagaggagaagaccagtggttcgtcaacagaagcaaacagtaaggacctcaaagccaca
gaaagctctgaagcatcaaagatccatgggtcttcctggccgcctgcaggctccgaaaga
ctgacatgggacacgcaccagcagtctccccagagtggcccaacttgccatcatcaaagc
agttgcacggtgagtggaaagagcactgggtcaagcatgggagaactgccccacacaggg
tacttgatcaactccctagtggcctgggatatattattgcttttacgtgattccatcctc
acagcgtctgcccagacttacactgaaataggtcaacaagctgagacaaaagaaagttgc
tcaagaaagaaagtacaagttcgtttatcatccctctcccgcttaatcagtgaaggactg
tggagaatgcaggtaatagctccttacagtcgtaaatttggttcagtagaaaattttgat
gactttctcgatgggacactcatttcaggaaatacaggttacacagtgtatgaaaattct
atgcagaccagtgctaagtcaaaagtacccaacccaggacaaacatccaattcacaagga
atgaaaaagcgtcatggaaaagagcatgagttgacagaattaactacaggtttgcaagac
cataccagtgtcataacttatcttttggctccaccgtcaagtctgatcaccctagccctt
gccaatggtaatgtaacgagagcagagcaagtcgtcaaaatgtataaagttgtggattca
actgaaaaacgagaagtgtgcctaacaaacagactaagtcagctgcgtcctaaattatcc
ctgacaagccagaagtcaggcaaactgaaggaatccaaaggtgtgcaacacaaaggctac
tcaaaagacctgatacagaacattggtttactagctagagaaggttctgcacaggtgagt
actacgaacttgattcacgaccttgtgacatcaactccacctccaatacctcagtgtttg
tcaacaaaagtgatagagggtagttgccagattgcatcatccttcctgagtccccaggca
cttgtcttggcagacctagctctcacagtggacttgacagaaaccaccgcttcctatttg
atggaacaggctctgcagaggtcggtctctcagccctcagtcccctctagtctacccaag
accattggaagtatccaaggttacatccctgtactgcagaagttagcatcaatgtgtagc
acactaattgcagttagaactttagaatgtgaaagtgactcagatggtgcaaataagaat
ccttcagcagacacctctgcctatgcctgtccattctcagctaccccaatgtcacttatg
ctgtctcctctgccgcttggtgagagtgaactgaagaattatgtgaaagcctggtccaaa
ttcttagaatgttttgcagcaactcaagatacattactttggtttgatgatagcgacaat
gtggatagttctattaacatccatattcattcagggaaaaacagagcacacatgtcttac
aaattactacttcagattctgagtgaaaaagccaatcacttgtataggagcagcatcaaa
gaatgtcaggaaacaaaaatgggagcctttgttagaacattttatcaatatcttcagctt
atgtcggccatggttactctccatgcagatgagaagtaccataacagcatgaagagctat
ttctccttacttaagcagagacctgtacacattttgggttcattaatgttccaggaaggc
gtcgacccagtcaagttagagccaatagctgctagaatgagactgaatctgactgcaatg
attctccagtattgctgtcccaagatcacagtatcatatgaatttttgtacagaagagga
catgatacagaagtccgggatgtagcctcaagacttggctttcaggcctctcaaggacag
gttataatgaattcaagaacaatagagggtacctcagctgtttacggagaagtgatcgtg
cgagatattttaacgtctctgctcagtggtttaaaggaggcaatacaacctcaagcattc
acattcactcattgccacaaagcagttattctgaatgatgcaactgccccacatgcatta
ttgtcaattgatattcaagaagcattaaacgatacctcagagttagctgctatggacttc
acaaaaatacccccaaatgaagaggcagttgtattttttataaatttagcaaatctgatg
tacattcatgcaggcttactaaaccacatactgtatcccaagagtaaatcgggtgaatcg
agaggtattttctccagctatctgatagaacgcctgatggctatgaaacatctcggttac
aaccttggccagctaggattcctctccttgcacgatgttctgtttggtgtgctacagctg
cagaatccattatcaagtttattgatccaaaatgaggagaatgtcagagtcagcctttgt
gagagcactgtgataaaaagtagtttgcaacatgataatgcagagaagttgaaacatatc
tctgggctcattactgctttcccttccaagctaagcttttgcataacacaaggaaatcca
gtctccccattagtgcaagttatttatgcagatcgtcttgaagagcacattgaagcagca
gtgtctgaacatttaaatatgttttctcttgtgaaagaaagttgctcaggaaatgcagat
ggagagatagaccatcctcatggaacccaaaaggtgaacatgtgtgtgtccagaacaata
ctgaactatgtagcaaggcactgtaacgggacttttgatggaatgagttctctgatgcaa
gaggtgaatgaggaggtggccagtttctttaacaaacctgatgcgggaatctccagcaaa
aagcagatagagataagtgttttggataataatgaggatcagggtattgctgtagaatat
gtagaacacctagttaatcaagaatttgccatgacacacaacatttccgaaaccattgta
tcacctgcagtatctgatggactggactggacttcagtcaaggttccacctacggtttta
agtcacctaaggagacagtgcccccttcttgccttcatagtgcaggcattacacagtgcc
ttggaaatgaaacgacagaaaggccattcatgggcagatgatgaaactgatgcttggcac
aagattctgtaccctcccgagagaggggtaaaacctcagcatgacgaaacacaccacttc
aaggcatgtaaaaatgtcttcaccaacagcaggtataaggccctgggaaggattagccag
gacagcaatgtcttatcagcattactgatagatcctgatatctcatccatatggtcatta
gctgaccagctattaggaagccaaacaatcaccaaggattgcacaatggaacggcagtct
aatgtcaacagcttgatgacagttctgcaagctttacctacggccacaatggaggctcat
cccaatcttcagtcacttttggatcaacttctggtcttcatggtgcaaacttctgatgtt
tcaggtaaattggttgtgactttagttacagatgagtttattttgactcagtttctccag
ttatctgatctcaaaccatggatgtatgcttatcacatattggattgcaacgtgagatac
accacaatccaggaagcacacaaagtgacacacctgttaagacccatagatagatactct
tatgaattagtatttatacttactaaggttttgcattacagatcatggccagcctccgca
gcagtcgatcacttgaatatcatggtttatgattcaagactcccaaggcataagcaagaa
tgggcccagaacaaggcagtgcaaattagggtctatgaagagatccttagagtcgggaat
ccagaagtcagttcctggcaggagatagaaaagatgtctgaagaggaacctgcagttctg
cttcagatgttgctccagaagaagcagttcaagttaggtgtccagtgggctgagcaccac
aatgtcagtcctgaactgcgccgactggttgaccagagttacctgatgtctgtcttggac
aagacgaacccagaatatggcacagctctggaggctcttcatgctctgagctccaatgat
ttggtcattgttatacaagctcttctggataggctatcaagtccacccaccaggaggttc
ttgattgagttcttgctgaagacacaattcacatctgaagctgtttccttgtacaaggac
aacaatgagctctctgggaaggagaatgaagagggtatcactcccagtacagttccacca
tccattgcccttccaaatctcagtgatctgcaacaggaggtcatgggattaattttagtg
gaggatattgctccccatgcagatgacaggttccagttgagccacttggcatccacccca
catcttatcattgaacaatggctaatgaacatcaaactagaagctgtggagaaagctata
aagacccttagccaacatttggatatggtagactctagaatgtcttccagcattcactca
caggattttggtatctcaagtctgtgcaaggaggctggagttcaaaagagagagccacag
tcattaagctgggatgttctgaactggctgcttgaggcttatgcagctaaggctttggat
acaacgggtgtgcaagtcacgctaaaaccacagactctaaacgagaatgtcccaaagaag
tttgttatgccagccaggcctccagaaagacatgagtggattccagatgctgaagtgaga
gaatgccccatctgcagagttgctgtcttctctatgttttgtaggagacatcactgccga
agatgtggtcgtgttgtctgtggctcctgctctaaagccaggattgttgttcagggctat
ggagacttgcaagtaagagtttgtatagagtgttaccagcagacaaaaaatctgaatctg
gaggattatattcaggtaaggccgcttggagatgggacctatgacactgtgtctcagagt
tcagagggcttggtgagtgccagaggggggggaggatcttcctgcaccagtgacacagag
gggggctggtacctctccactgacccagatcacaatgctcttgtccgccaggaattctgc
tatgactatgcaccttcactcagcctgtgtcttgctatcctggcacagcaccaagaccac
aaaagagcagctgtttgtattgtgaagctgtgtcatcacttgttttcccttattgtttct
tccatcaagtctgctagtcctgaggtagacaacacttttgtgctttcaatgattcagacg
ttgctagcctcatcaaaggtgcgatttgggaacataggtgagcatcagggaatagctctc
tgtgaatactacacccagtgggtggatttgatcgctctcctatcaaaagccaactgcggc
tacataattcctattccatctttgcagaacatgctccagattggagagctgcacagaaag
aatttaatgggagaggataaattaaaggaaaaattggagaggtgcttgcagcaggaattt
gttcacatgagacacctgcgtgacatgctggtgaagaaacagctgtgggaattggctctg
aatatttccactaaggctggtttggaggcaacaggcgtctggggtgcatgggctatggca
tcactgaaagctggagatttcccaggagcaagagaacgcttttcccgggttctggaaagg
ccgtttgataagagaaggccctgtaggtcctctttattgccagaagtaataaagtacctg
gagagcaacccattctctgtggaccagaaggtgatggagcaggcagaaagagcgcgagct
accatcatgatgaacgaccagtcgagattgcctccatcacaagctcttgttgttctccac
tctttacaagagcttaatggtatttctaatgggctgcttaccaacagagagagcaataag
cagatattctctagtcatagaactaaaaagaagaataattccaaaatggattccttgttc
caaactgaatgcaagtattacttgtgtttgtatggaaatcatcgtatgaccattcagtat
ttcatgaggaataagcagttgcaggaatgtgtgaattatcttctgagtgaagaaattgag
gttgatctctttgtgcatgaagtgttggtacctattttaagatgtggacagttagacatg
ctgttgagaaacttcagagctatagaccccaaacaggaaaaatgggcgaagtatatgctt
ggaggctgtcggtggctggagcgccaaggatggtggaactccctcttagctgtacaggag
gcactaggggatagactgagagctgcaatgactcttcttcgaatgtacagccatacagta
gacagttacaatggattagctaacagagttcaccatctgcttgcagcaaagtcacatctc
caggcttatcttgatacacaggctttacaccagtccagtgccaaaaaaaagaaaatcata
ctgaaacatgtcaggatggcaagtaaacagcacatcaatacgctaacactgcaggcagat
gttacaaagtttctagctaactgtgaggcaaagggaaatatgctttgttccttgttgcac
aatctccacaaaatgaaagtccttggaaacataagtttgcccactttgcttggggatgaa
gaagagcgtttagctgtagcctctcttgctatatgcagtgctcagagtgtcgcagatgga
ctgagcttggcatatcgtgtggtggagggcagtggcatatctacagagaaattgctgtca
gtcgttagtcagctgctagtagcacacgagcagtacagcacagtgggacaggttgtccgt
ggcatgcaagagtggggggtgttgaaagcaaaaactatagatattgctctacagccagca
ctgttggccacagcaagcagcacccagaacactcatctagattcccttgtcaaacttctt
tcaagtgacagtgcaaagattgaagcatacatcaagtgcggtcgtctaaagtccgcatac
ctggtagcagtgcatcgtggcagacatgaggacgttgtaaaggtgcaggaagtggcgaag
tcaaacggtcaagcacatgtagccactatgtgtagtaagtggttagcgaactatgagaat
cgcgtcagtgctcgaatgtaa
DBGET
integrated database retrieval system
