Penaeus chinensis (fleshy prawn): 125033338
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Entry
125033338 CDS
T08118
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125033338
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pchn01007
]
125033338
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchn03016
]
125033338
Enzymes [BR:
pchn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
125033338
Amino acid related enzymes [BR:
pchn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125033338
Transfer RNA biogenesis [BR:
pchn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125033338
Prokaryotic type
125033338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
GST_C
Arc1p_N_like
GST_C_3
GST_C_2
GST_C_6
GST_C_7
HTH_MCM7
Motif
Other DBs
NCBI-GeneID:
125033338
NCBI-ProteinID:
XP_047480705
LinkDB
All DBs
Position
16:2154975..2164318
Genome browser
AA seq
1209 aa
AA seq
DB search
MYFIKQLCNMKSSEVRETFYNFFKEKHQHTYVHSSPTIPHDDPTLLFANAGMNQFKPIFL
GTVDPSSDMANYVRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEV
CTWAWDLLVNVYKLPKERLYVTYFGGFPEQGLEPDLECKQIWMDLGVPEDRVLPGDMKDN
FWEMGDTGPCGPCSEIHFDRIGGRHVAHLVNMDDPDVLEIWNLVFIQFNRESDGTLKNLP
KKHIDCGMGLERLTSILQNKRSNYDTDLFLPIFEAIQKLTSIRPYSGKVGKDDADGVDMA
YRVLADHIRTLTIALSDGGMPDNAGRGYVLRRILRRGIRYATEVLGMKPGMFASLVDVVV
QILRDAFPEVAKDPEFVKDVINEEELQFLKTLDRGHKLLKRTIDKLGGSTVVPGDVAWRL
YDTYGFPVDLTQLMAEEKGLAVDMDKFEVSKKEAQEKSRGENKDKDNSFRLDVHAIEDLK
DRKVPFTDDSFKYMYTAGEAVDSPYNFEVTNSKVIAIRYNNQFVDEVKSGYRCGIVLDKT
NFYAESGGQMYDEGFMVKIGDEETEFKVESVEVKGGFVCHIGVVEGTIKLGDEMNMSIDW
ERRRHLMNNHTGTHILNFALRQVLASEADQRGSLVAPDRLRFDFTNKGAMTVDQVKKAEE
ICRQMVKENKPVYAKTASLYVAKSIQGLRAVFGEVYPDPVRVVSIGIPVETLEADPQSPA
GSVTSIEFCGGTHLLRAGHAGDFVIVSEEAIAKGIRRIVAFTGPEAVKALNKASLLENEV
NKLKKRIAENNMPFKEVVRLLTEMLNDINHAQIQHWRKEELRKAVEAVKKVQGDADRARK
TAISKEAIQITKNVLAANPNIPYLVTELKAFAQNKVLNDALKEAKNGPPALFVSTDEDTG
KILAMASVPKNVVAKGLKADEWVKNLAELVNGRGGGKPESAQLSGSNVRALQEAIAASEK
FAQEKLGCGPVVLSPPAAVATTPAAQPQVSKNKQEKSGKQQSTQKQESKVPKNGLVLHSY
PNSVRAFPALIAAKYSGKNVTISHTNKPSDPEYVTKFGSSTLPGLETPDCALTGNVGVAW
YLASPELRGSSSMHEAQVLSWMLAADNSLLHVVSSGLVGSGKDKKKDDGALKAAMKELQK
MNTYLRDHTFLVGERLSLADVSVFASLIPAFQHGLDKAARERLPCLTRWFNTVLHQPRVV
EVVGKITLK
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtattttattaagcaattgtgcaatatgaagagttccgaggtgagagagacattttac
aacttcttcaaagagaagcaccagcatacctacgttcacagctcccctaccattcctcat
gatgatccgactcttctgtttgccaatgccggcatgaatcagttcaagcccatcttcctg
ggcacggtagaccccagcagtgacatggctaattacgtccgcgccgtcaactcacagaag
tgcatccgtgctggcggaaagcataatgacctggatgatgtaggcaaggatgtgtaccac
cacaccttcttcgagatgttgggtaactggtccttcggtgactacttcaagaaggaggtg
tgcacttgggcatgggatctcctggttaatgtgtacaagctccccaaggaacgcctctat
gtgacctactttggcggtttcccagagcagggcctggagcctgacctggagtgcaagcag
atatggatggatctgggtgtccccgaagaccgtgtgttgccaggagacatgaaggacaac
ttctgggagatgggtgatactggaccatgtgggccatgctctgaaattcactttgaccga
attggtggtcggcatgtggcccatcttgtcaacatggatgatccagatgtcttggaaatc
tggaaccttgtgttcattcagttcaacagagagtctgatggcaccctaaagaatctaccc
aagaagcacattgactgtggcatgggattggagcggcttacatctattctgcagaataag
aggtctaattatgacacggatctgtttttacccatctttgaagctatccaaaagttaacc
agcattaggccttactcagggaaagttggcaaggatgatgctgatggtgtcgacatggca
tacagggtgctggctgatcatattagaactttaacaattgctctctctgatgggggcatg
ccagacaatgctggaagagggtatgtcctgcgtaggattctcaggcggggcattcggtat
gccactgaagtgctaggcatgaaaccaggcatgtttgcttcccttgtggacgtagttgtg
caaattctgagggatgctttcccagaagttgctaaggatcctgaatttgtaaaagatgtc
ataaatgaagaggaacttcaattcttgaagaccctagatcgtggtcataaactactgaag
cgcaccattgacaagcttggaggcagcacagttgttcctggtgatgtagcttggaggctg
tatgacacttatggtttccctgttgacctgacacagctcatggcagaggaaaagggcctt
gctgttgacatggacaaatttgaagttagcaagaaggaggctcaggaaaaatccagagga
gaaaataaggacaaagacaattcctttagactagatgtccatgctattgaagatctcaaa
gacaggaaagtgccatttactgatgattctttcaagtatatgtacactgcaggtgaagca
gtagattctccatacaattttgaagtcacaaatagtaaagtgattgccatcagatacaat
aaccagtttgttgatgaagttaagtctggatatcggtgtggcatagttcttgacaagacc
aacttctatgcagagagtggtggccagatgtatgatgagggcttcatggtgaaaataggg
gatgaggagactgagttcaaggtggagtcggttgaagttaagggtggatttgtatgccat
attggtgtagtggaaggcaccatcaaactgggagatgaaatgaacatgagtattgattgg
gagcgcagaaggcatctgatgaacaaccacactggcacccacatcctgaacttcgcatta
cgccaagtcctggcgtcagaggctgatcagaggggctctttggtggctccggacagactt
cggtttgacttcactaacaagggagccatgactgttgatcaagtgaagaaagcagaagaa
atctgcagacagatggtgaaggagaacaaaccagtttatgctaaaacagcctccctttat
gtggctaagagcatccaaggtcttcgggcagtgtttggtgaagtttaccctgaccctgtg
agagtggtttcaattggtatccccgtggagaccctagaagctgacccacagagtcctgct
ggcagtgtcacaagcattgaattctgcggtggtactcatctccttcgcgcaggtcatgct
ggagactttgtcattgttagtgaagaagccattgccaagggaatcagacgtattgttgct
ttcactggccctgaagctgtcaaggcacttaacaaagcttcacttctggagaatgaggta
aataaactgaagaagagaattgcagaaaacaatatgccattcaaggaagttgtacgtctc
cttacagaaatgctgaacgatatcaaccacgcccaaattcagcactggcgcaaagaagag
cttcgcaaagcagtagaagcagtcaagaaggtccaaggtgatgccgacagggccaggaaa
accgctatttcaaaggaggcgattcagatcaccaaaaatgttcttgcagctaaccccaac
atcccataccttgtgaccgagctgaaagcatttgcccagaacaaggtcctcaatgatgcc
ctgaaagaagcaaagaatggacctccagctttgtttgttagcacagatgaggatactggt
aagattctggctatggcttcagtgccaaagaacgttgtggccaagggattgaaagctgat
gagtgggtgaaaaatttggctgaattagtgaatggccgaggtggaggcaaacctgagtcg
gcccagctgagtggaagcaatgtcagagctcttcaggaagcaattgctgcatcagagaaa
tttgctcaagagaaattgggctgtggcccagttgtattgtctccacctgcagctgttgcc
actacaccagctgcccaaccacaggtatcaaaaaataagcaagagaagtcaggaaaacag
cagagcactcaaaagcaagagagtaaggttccaaagaatggccttgtactgcactcgtat
ccaaacagtgtccgtgctttcccggccctcatagctgccaaatactctggaaagaatgta
accatctctcatactaataagcctagtgaccctgagtatgtcacaaagtttgggtcatcc
actttgcctggcctggaaaccccagattgtgcactaacaggtaatgtaggagtggcctgg
tacctagctagccctgagcttagaggcagcagctcaatgcatgaagcacaagttttgagt
tggatgctggctgctgataatagccttctccatgttgtaagctcaggtttggtaggttca
ggaaaggacaagaagaaggatgatggggccttgaaagcagctatgaaggagctgcaaaaa
atgaatacatacctccgagaccacactttcctagttggagagcgactttcccttgctgat
gtgtctgtatttgcatcgctgatcccagccttccagcatggccttgacaaagcagcacgt
gagagactaccttgcttgacacgctggttcaacactgtgctccaccagccgagagttgtt
gaagttgtggggaaaataacgctgaaataa
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