Penaeus chinensis (fleshy prawn): 125033426
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Entry
125033426 CDS
T08118
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03018
RNA degradation
pchn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125033426
09123 Folding, sorting and degradation
03018 RNA degradation
125033426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125033426
03041 Spliceosome [BR:
pchn03041
]
125033426
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125033426
mRNA degradation factors
5'-3' decay
Lsm complex
125033426
Spliceosome [BR:
pchn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125033426
Complex C
U2 snRNP components
125033426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
125033426
NCBI-ProteinID:
XP_047480871
LinkDB
All DBs
Position
16:complement(802669..808358)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDINVTDTEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDTQLLQDAARREAQQQRQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctactctttctttaaatccctcattgggaaggatgtagtggtagaactaaag
aatgacctcagtatctgtgggactctgcattcagtagaccagtatctaaacatcaaactc
acagacatcaacgtcacagatactgagaaatacccacacatgctgtctgtgaagaattgt
ttcatcagagggtcagtcgtgcgctatgtgcaacttcctgtagatgaagtagacacgcag
ctgctccaggatgcggccaggagagaggcacagcagcaacggcagtag
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