Penaeus chinensis (fleshy prawn): 125033573
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Entry
125033573 CDS
T08118
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03040
Spliceosome
pchn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125033573
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125033573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchn03041
]
125033573
04121 Ubiquitin system [BR:
pchn04121
]
125033573
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125033573
Enzymes [BR:
pchn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125033573
Spliceosome [BR:
pchn03041
]
Complex B
Other components
Prp19 complex
125033573
Complex C
Prp19-CDC5 complex
125033573
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
U-box type E3
125033573
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
125033573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Prp19
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
PEP5_VPS11_N
U-box
Beta-prop_DCAF4
eIF2A
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_WDR35_TULP_N
WD40_like
PROPPIN
Cytochrom_D1
ATG16
PUMA_CC
DUF7099
Motif
Other DBs
NCBI-GeneID:
125033573
NCBI-ProteinID:
XP_047481152
LinkDB
All DBs
Position
2:40456483..40465007
Genome browser
AA seq
505 aa
AA seq
DB search
MSLICAISNEVPDQPVVSPLSGAVFERRLLEKYIAENGTDPINNKELRVEQLIDLKVPTV
AKPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAATRVIARL
NKEVTAAREALATLKPQAGIAPATPAGPTIAATAEAGGAADVPGEGAGLTEDVVARLQDT
ATVLTQERKRRGRTIPEGLTPSEQIRSFNTLASHPGLHSASVPGILALDVHQKDTSKIVT
GGSDKNATVFNKDTEQVVAILKGHSKKVSCVVYHPTEDTVITASPDTQIRVWNVGTAQTL
QLIRAHDGPVTGLSLHATGDYLLSASRDHNWAFSDIRTGRVLCKVCDTSASSPLTAAQFH
PDGLILGTGTQDATIKIWDLKERSNVANFPGHSGAISSIAFSENGYYLATAAEDSTVRLW
DLRKLKNFKTIQLDEGYEVMDLCFDQSGTYLAVAGTDVRVYLCKQWTDLRVFNDHTAMAT
GIRFGSNASYLASTSMDRTLKIYGP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcatatgcgcaataagtaatgaggtgccagaccagccagtggtatccccactt
tctggggctgtctttgagcgccggcttctggagaagtacattgcagaaaatggaacagac
cccatcaataacaaggaactcagagttgagcagcttattgatttaaaagttccaacagtt
gcaaagcctaaacctccaagtgcaactagtattcctgcaatcctcaaagccctgcaggat
gagtgggatgctgttatgcttcactcctttactctgcgtcaacagctccagactgctcgc
caagaactcagtcatgccctgtaccagcatgatgctgctactcgtgtcattgcccgtctg
aacaaggaagtaacagctgctcgtgaggccttggcaacactgaagccacaggccggaatt
gcacctgctacaccagctggaccaactattgctgcaacagcagaggcaggaggtgcagca
gatgtcccaggagagggtgcagggttgaccgaggacgttgtagcacgcctgcaggacaca
gccacagttctcacacaagagcgaaagagacgaggccgaaccattccagagggccttaca
ccatcggaacagatcaggagcttcaatacacttgcatctcatcctggtttgcatagtgct
tcagtaccaggtatcttggccttggatgtgcatcagaaggacaccagcaaaattgtcact
ggcggaagtgacaagaatgcaacagtgtttaacaaggatacagagcaggtggttgctatc
ctaaagggccatagcaagaaggtatcctgtgtggtttatcaccccacagaagatactgtt
atcacagcttctccagatacacagatccgtgtttggaacgtgggaactgctcaaacgctg
caactgatccgagctcacgatggacctgttactggcttgtctcttcatgctacaggagat
taccttctgtcagcttcccgtgaccacaactgggccttctcagacatcaggactggacga
gtgctttgtaaagtatgcgacacatctgctagctcccctctgacagctgcccagttccac
cctgatggtctcattcttggaacgggaactcaggatgccactatcaagatctgggacttg
aaagaacgctctaatgtggccaactttccaggtcacagtggcgctattagttctattgcc
ttcagtgagaatggttattacttggcaactgcagcagaggactctactgtgagactctgg
gatttgcgtaagctcaagaacttcaagacaatacagcttgatgagggttatgaagtaatg
gacctatgctttgatcagtctggcacatacttagctgttgcaggaactgatgttagagta
tacctgtgtaagcaatggacagacttgcgagttttcaacgatcacactgccatggccact
ggtattcgtttcggctcaaatgctagttatcttgcatctacatcaatggacagaaccctg
aagatttatgggccgtga
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