Penaeus chinensis (fleshy prawn): 125034112
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Entry
125034112 CDS
T08118
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125034112
04121 Ubiquitin system [BR:
pchn04121
]
125034112
Enzymes [BR:
pchn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125034112
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125034112
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125034112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
DUF5711
zf-RING_2
Prok-RING_4
zf-RING_UBOX
zf-RING_5
DUF948
COG5_N
DUF677
Motif
Other DBs
NCBI-GeneID:
125034112
NCBI-ProteinID:
XP_047481708
LinkDB
All DBs
Position
17:4135966..4141033
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AA seq
827 aa
AA seq
DB search
MAGSLGSSGSLNLGNNSTGSSGGICPMCMGILEEARVLPCLHAVCSPCLDSLLVGTTLAC
PTCHTELNLDQPLDTLTAPPFLPSLLDIVSTDDDLPTNSPPTSVSKPPAPHINNREQLAP
LPRIHKELSGGVRSKLYLCASCDDRQAATSRCRDCNEALCDSCVRAHQRVRLTKDHFIVR
LSAEDGNGLIGVGGNGNGRVPGHSHYPEDNCHTPLSLSSPPPTLSSHSSPHPTVMYCSIH
EGEVLRLFCDMCNAAICRECTLRDHRGHSFIYLQDAAENSRSVTIKLLTDARTGIRTIED
SIGVTKRMVDRVDLRAQAVASDVRSTTRRHISALEDRERKLLHKVEKIRQVKGKTLQDQI
DDLSSALARLTHTVDTVGSSVDSVNHIELIQMRDKILAEMNELRQVKAHLSPHEDDNIVF
TPPDVSLYQAINAMGFISSSGYAPNSVAVGNGLKQALRGKLATFLVHGKDHLTDQRLVGG
DQVTVTVHGPDGLSFKGDVQDRGNGSYLVSYRPQVEGQHMIAVQMRGIHIQGSPFTVQVK
SGRSYSSVGPVLLTLGGEGEGEGQLCRPWGVCCDKDGYIIIADRSNNRVQVFSPDGSFHH
SFGTAGSRPGQFDRPAGVAADHMGRIIVADKDNHRIQVFTFDGTFIFKFGEKGSKNGQFN
YPWDVAVNAEGNIVVSDTRNHRIQLFRADGTFINKYGFEGALWKHFDSPRGVCFNHEGHI
VVTDFNNHRLLVIHPDFQSARFLGSEGSSSGQFLRPQGVAVDQEGHIIVADSRNHRVQIF
QPNGNFLCKFGMPGSGQGQLDRPSGICVSPDGYIIVVDFGNNRVQVF
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggctggctcccttggcagcagtggcagcttaaatcttggaaacaacagcacaggcagc
agtggtggtatttgtccaatgtgcatgggaatcctggaggaagctcgagtgctgccatgt
ctccatgcagtgtgcagcccatgcctagattctcttttagtgggcaccacccttgcctgt
cctacatgtcacactgagctcaaccttgaccagccactggacacattaaccgcaccaccc
tttttgccatcgctccttgacattgtatccaccgacgacgacctccccaccaactctcca
cccactagtgtcagtaagccccctgcaccccacatcaacaaccgtgagcagctggcacct
ctcccccgtatacataaggaactctcaggtggtgtgcgtagcaagctgtatctctgtgca
agttgtgatgacagacaggcagcaacttcacgctgtcgagactgcaatgaagccctctgt
gactcctgcgttcgtgctcaccagagagttcggcttactaaagatcatttcattgtgaga
ttatctgctgaggatggtaatggcctcataggagttggaggtaatggcaatgggagagtc
ccaggccactcccactaccctgaggataactgccacaccccattgagtctatcttcacca
ccacctacattatcctcacattcctcacctcatccaactgtcatgtactgcagcattcat
gagggcgaggtactacgactcttctgtgacatgtgtaatgctgccatatgtcgggagtgt
acactgcgggaccaccgtggccattccttcatttaccttcaggatgctgctgagaattcg
agatctgtcacgataaagctcctaacagatgccaggactgggatccgcaccattgaagac
agcattggcgtgacaaagcgcatggttgaccgagttgatctacgtgcccaagcagttgca
agtgatgtacgttccaccacgaggagacatatttctgccctagaagaccgtgagcgaaaa
ctgctgcataaagtcgagaaaatccggcaagtgaaaggcaaaacactacaggatcaaatt
gatgatttaagttctgccttagcaaggctgacccatacagtagatactgttggctcatca
gtggacagcgttaatcacatagaactgatacagatgcgtgataaaattcttgcagaaatg
aatgagttgagacaagtaaaagctcatcttagccctcatgaagatgataacatagtgttt
accccacctgatgtctctttgtatcaggccattaatgcaatgggtttcatctcctcttct
gggtatgcaccaaattctgtggcagtgggaaatggcttgaaacaagcattacgagggaaa
ttagccacttttttagtgcatgggaaggaccatcttacagatcaaaggcttgtaggaggt
gatcaagttacagtgactgtgcatggccctgatggtttgtccttcaagggtgatgtacag
gatcgtgggaatggttcctacttagtaagttacagaccacaggtagaagggcagcatatg
atagcagtgcagatgcgaggtatacacattcagggctcacctttcacagtacaagtaaag
tcaggaagaagttattccagtgtgggacctgtgttattaactcttggaggagagggtgaa
ggggaaggtcagctatgccgaccctggggtgtctgttgtgacaaggatggttacatcatc
attgctgacaggagcaataatagagtgcaagtttttagtccagatggcagcttccatcac
tcatttggaacagctggttcccgtccaggacagtttgataggccagctggtgtagcagca
gatcacatgggtcgcatcattgtggctgataaggacaatcatcgtatccaagtgttcact
tttgatggaaccttcatttttaaatttggagaaaagggaagtaaaaatggacagtttaac
tatccatgggatgtcgcagttaatgcagaaggaaacattgttgtttcggataccagaaat
catcgaatacaactattccgggcagatggcactttcatcaacaaatatggctttgagggt
gcactttggaaacactttgactctcctcgtggagtttgtttcaatcatgaaggtcacata
gttgtcacagacttcaataatcatcgtcttttggtaattcacccagattttcagtcagca
agatttcttggtagtgagggctcatcatcaggccagtttttaaggccacagggagtagca
gttgatcaggaaggacacattattgtggcagattctcgtaatcatcgtgtccaaatattt
caacctaatggtaattttctctgtaaatttggaatgccaggctctggccaaggccagctt
gaccgtccaagtggcatatgtgtgtctccagatggctacattattgtggttgactttggt
aataatcgggtccaagttttctga
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