Penaeus chinensis (fleshy prawn): 125034335
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Entry
125034335 CDS
T08118
Name
(RefSeq) calsyntenin-1-like isoform X1
KO
K22659
calsyntenin 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pchn04515
]
125034335
Cell adhesion molecules [BR:
pchn04515
]
Cadherins
Cadherin related
125034335
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Ortholog
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GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
FAM176
Glyco_hydro_16
Motif
Other DBs
NCBI-GeneID:
125034335
NCBI-ProteinID:
XP_047482099
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All DBs
Position
17:complement(18276222..18544073)
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AA seq
968 aa
AA seq
DB search
MCVSESGAMKSLWIILSVTVAGVISSENSGVPVFDLVQPSEGYHGLVSEKDTVVEVQPPI
RATPNVCFYRIVNKHHGEAPFIIRLRNEATGEAELIAKRPLNCEKRKNYKFDITAVSCDA
NVESQNVTVHVKVNDVNEYAPVFVEPSYVVGVDEGRLYDEILTLQADDQDCSPKYGDICR
YELLTKDQPFSIDSEGVVRNTEPLDYEKSHNHILSVVAYDCGMERSQPVMVTIKVNRVCH
LGWKGITDQVEYSPGSGRQELFPSASLELCNVPCRVERVQARISLTTSHIGKGCDRDTYS
VAAQRKMCGASSSSIELLPAPGAGKDWTAGLHSDEGHEGDLIYEFDGDSSGTLIPESILN
HNLTSTFTISTWLKHKTQAGTDKHTKEHILCNADDHKMNRHHMALFVRNCRLILLLRRDY
TEANLNTFQPAEWRWKLPQVCDNEWHHYSVHVKLPEVTLYVDGHIFRPENGESPEVIDDW
PLHPTRGINTTMSVGACWQGFSSSGSEGNMKHGLSGYLAGLSVLVGALESPRVLSCLTRC
QESLDTPAMELLQPSMELLTNNEMTQITIEGNNVTNLETLIRRVAYVNGRDFPTPGRRPV
SVTTNILCNSEKALKVATAQSFVVVMQPHQPSIELNGTTNFAEEYEAFRQGLRVFPDVGI
YLSAAAEEATAPTLGGQLDECVVSVYPPLNPDHETLVLPDNLIAELGLAASITRQGATVS
GAHTTHHYQSILRQIHYANRKPAYYLNRAFKLSCSELGGRFTSNEYVQTVTVIHPQLSVD
KTAAFNTNTDSIPPHMEHNNHNAHQEADAHLTHHNPQPVPAHAKLSAHHVELKPAHTVND
VYFTSNVMEGVAVNSASHAVTIIIVVCVGFLVFMVVLGVIRVRAAHTRHTHEDVADAEMA
WDDSSLNITVNPMEQQLELAETQRLRDDDDDDDDSSDDGSNFNDDLDSSDEEEGKPKELE
WDDSTLKI
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgagtgaatcaggagcgatgaagtctctttggattatcctatctgtgacggtg
gccggagtaatatcttcagagaattcaggagtgccggtgttcgacctcgtgcagccttcg
gagggctaccatggcctcgtctccgagaaggacaccgtggtggaggtgcagccgcccatc
cgcgccacgcccaacgtctgcttctacaggatcgtcaacaagcaccacggggaggcgccc
ttcatcatccggctaagaaacgaggccaccggagaggccgagttgatagccaagcgtccc
ctcaactgcgagaagaggaagaattacaagttcgacatcaccgctgtttcctgcgacgcc
aatgtggagtcacagaacgtcaccgtccacgtgaaagtgaacgacgtgaacgagtacgcg
cccgtgttcgtggagccgtcgtacgtggtgggcgtggacgaggggcgcctctacgacgag
atactgacgctacaggccgacgaccaggactgctcgcccaagtacggagacatctgccgc
tatgaactgctcaccaaggaccagcccttcagcatcgacagcgagggcgtggtgcggaac
acggagcccctggactacgagaagtcccacaaccacatcctgtcggtggtggcctacgac
tgcgggatggagcgctcgcagcccgtcatggtcacgatcaaggtcaaccgcgtgtgtcac
ctgggatggaaaggcatcaccgaccaggtggagtactcccccggctccggtcgccaggag
ctgttcccctcggcgtccctggagctgtgcaacgtgccctgccgcgtggagagggtccag
gcgcgcatcagcctcaccaccagccacatcggcaagggctgcgacagagacacctactcc
gtggcggcgcagaggaagatgtgcggtgccagctcctccagcatcgagctcctgccggcg
cccggtgcagggaaggattggaccgccggcctccactctgacgaaggccacgaaggcgac
ctgatctacgagttcgacggcgactcctccggcaccctcatcccggagtctatcctcaac
cacaacctgacgtcgaccttcaccatctccacctggctcaagcacaagacgcaggcgggc
acggacaagcacaccaaggagcacatcctctgcaacgccgacgaccacaagatgaaccgg
caccacatggccctcttcgtgaggaactgccgcctcatcctcctgctgcgccgcgactac
accgaggccaacctcaacaccttccagccggccgagtggaggtggaagctcccccaggtg
tgtgacaatgaatggcatcactactctgtccacgtgaagctgcccgaggtaaccctgtac
gtcgacggccacatcttcaggcccgagaatggagagtccccggaggtgattgatgactgg
ccccttcacccaacacgtggcatcaacaccactatgagcgtcggcgcttgctggcaaggt
ttttcctcttcaggctccgaaggtaacatgaagcacggcctctctggctacctggctggc
ctctcggtcctcgtgggggccctggagtctccgcgcgtcctgtcctgcctgacccgctgc
caggagtcgctcgacactcctgccatggaactcctgcagcccagcatggagctcctcacc
aacaatgaaatgacacagatcaccatcgagggcaataacgtgactaacctcgagacgctg
atccgccgcgtggcctacgtcaacggccgagacttccccaccccgggccgtcgccccgtc
tcagtgaccaccaacatcttgtgcaactctgaaaaggccctgaaggttgccaccgcccag
agcttcgtggtggtgatgcagccgcaccagcccagcatcgagctcaacggcaccaccaac
ttcgccgaggagtacgaggccttccgccagggcctgcgcgtgttccctgacgtcggcatc
tacctctcggccgccgctgaggaggccacggcccccacactgggcggccagctggacgag
tgcgtggtgtcggtgtatccccctctcaaccccgaccacgagacgctggtcctccccgac
aacctgatcgccgagctcggcctggccgcctccatcacgcgccagggagccaccgtgtcc
ggggcccacaccacgcaccactaccagtccatcctgcgccagatccactacgccaaccgc
aagccagcctactacctgaaccgggctttcaagctgtcctgctccgagctcggtggtcgc
ttcacaagtaacgaatatgtccagacggtgacagtgatccacccgcaactcagcgtggac
aagaccgcagccttcaacaccaacaccgacagcattcctccccacatggaacacaacaac
cacaacgcccaccaggaggccgacgcccacctgacacaccacaacccccagcctgtgcca
gctcacgccaagctctccgctcaccacgtcgagctcaaacccgcccacaccgtcaatgac
gtttacttcacttcaaatgtcatggagggcgtagcagtcaacagcgccagccatgcagtg
accatcatcatcgtcgtctgcgtcggattcctcgtgttcatggtggtcttgggcgtgatc
cgtgtgcgcgccgcccacacccgccacacgcacgaggacgtcgccgatgcagagatggca
tgggatgattcctcgctcaatatcaccgtcaatcctatggagcaacagctggaactggca
gagacacaacgattgagggatgatgacgatgacgacgacgactcgtcagatgatggaagc
aacttcaacgatgacttggactcgtcagacgaggaggaagggaaaccgaaggagctcgag
tgggacgactccaccctcaaaatttaa
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