Penaeus chinensis (fleshy prawn): 125034553
Help
Entry
125034553 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125034553
03036 Chromosome and associated proteins [BR:
pchn03036
]
125034553
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
125034553
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Topoisomerases
125034553
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
125034553
Centrosome formation proteins
Centriole proteins
125034553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
125034553
NCBI-ProteinID:
XP_047482390
LinkDB
All DBs
Position
18:27279968..27306015
Genome browser
AA seq
1585 aa
AA seq
DB search
MPAVNGTDVPNNIPAPAMVAQQAAKKGPKSVETVYQKKTQLEHILLRPDTYIGSVEFTTE
QMWVFDTETDRIVQKEISFVPGLYKIFDEILVNAADNKQRDPGMDTIKVEIDPENNVISV
FNNGKGIPVAMHKDEKMYVPTMIFGHLLTSSNYNDDEQKVTGGRNGYGAKLCNIFSNKFV
VETASKEYKKNFKQTWGTNMSKTSDAKIKEYGGEDFTKITFSPDLVKFKMESLDNGIVSL
MSRRAYDIAASTKGVKVYLNGKRVPVKNFKDYVDLYLKDKVDDADNQVKAVYENVNERWE
VAVALSDKGFQQMSFVNSIATTKGGRHIDYVTDMIVKNITETLKKKNKSGVQIKPFQIKN
HMWIFVNCLIVNPTFDSQTKENMTLQAKSFGSKCSLSDKFINNVMKCGIVEAVMTWARFK
QQAQLQSKCANRKQNKLKGIPKLEDANDAGTKFSSDCTLILTEGDSAKALAVAGLGVVGR
DRYGVFPLRGKLLNVREASHNKILENAEINNIIKILGLQYKKKYENSEDLKSLRYGKLMI
MTDQDQDGSHIKGLLINFIHHNWPTLLRHTFMEEFITPIVKATKGKEELPFYSLPEFEEW
KKNKDNWPSYKIKYYKGLGTSTSKEAKEYFHDMVRHRIRFNYGGAQDDHSIQMAFSKKAI
EQRKEWLTGWMEECKRRKELGLPEVYLYERDTRAISYTDFVNKELVLFSNLDNERSIPCL
VDGLKPGQRKVLFTCIKRNDKREVKVAQLAGSVAEHSAYHHGEASLMSTIINLAQNYIGS
NNINLLQPIGQFGTRLQGGKDHASPRYIFTMLSKLARYIFHPHDDPLLKSNFDDNQRIEP
EWYMPILPMVLVNGAEGIGTGWSTRIHNYNPREIVENLKRMLRGEEPTRMIPWFKDFXGT
VEELDSQRCIVHGEVANLGGNKIEITELPVRVWTQAYKETILEGMLASSEKSPAMITDYK
EYHTDTTVRFTVTISEAKLGKAMEEGLHKTFKLTSSLSTNSMVLFDHNGVLRKFEAVEEI
LREFFDLRLKFYSKRKQYLVGMIQAEASKLSNQARFILEKCDGRLVIENKKKKEMIAELQ
RKGFDSDPVKAWKRVQDREAAMEEEEQQSESDQEEVDSKGPDYDYLLGMAMWSLTRERID
DLLKKRDEKTQELEVLKKKTPDNLWLNDLDEFLMKLDEVEQEERDSEAAANKKGNTGSKK
IKKLKNETMPSPFGERVVPSIDPELKKKAEKAAAAKENKGKRQVKKEVLENDDFDDLVAA
NTGKSLSARLGNSPDMILKKAKAKKSDGMKQTKLSFKKGSPKKKKGKNPWESGSEDDDED
DDIDADDVQPRERAAGRRTAAAKIKFQFSEDEDSDSNESLHDNAGIEEADAAPQQVSILE
ESVAKVEPKEEVVISDTDSEFDVKPKKTTVVPVAQEKPTASDLFDSMMGSSSPPKYEPEP
AIKKAPAKKRTKDDSSSEDDSVPQPKKKPAPKKKATVVPDDMSDDEPKPKKKGGRAKKKA
SPDNDMSDDEPKPKKKPGPKKTAAAKKKNDSDSDDMFDDIAPKGKAALNVSDDFNISEVA
PRERSGRQKKVITYALSDDDDDSDY
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtgaacggaacagatgtccccaacaacataccagcccctgcaatggtggcc
caacaggctgccaagaaggggcccaagtcagtggagacagtctaccaaaagaagactcag
cttgagcacatcctgctccgtccagacacctatattggttctgtggaattcacaacagaa
caaatgtgggtatttgacactgagacggacaggattgtgcagaaagagatttcatttgtc
ccaggtctttacaagatttttgatgaaatcttagtcaatgctgctgacaacaagcaaaga
gaccctgggatggacactatcaaggtggagattgacccggagaataatgtaatatcagtc
ttcaacaatggaaagggtatcccagtagccatgcacaaggatgaaaagatgtacgtgccc
accatgatcttcggtcacctccttacttcttcaaactataatgatgatgaacagaaggtt
actggaggtcgaaatggttatggtgccaagctttgcaacatcttcagtaacaaatttgtt
gtagaaaccgcctctaaagaatacaagaagaatttcaagcagacctggggaacaaacatg
agcaagacaagtgatgcaaagatcaaagaatatggtggtgaagacttcacaaagattaca
ttctctccagatcttgttaagtttaagatggagtccttagataacggcattgtatctcta
atgtccaggagagcttatgatattgcagcttcaactaaaggagtcaaagtgtatctgaat
ggcaaacgtgtcccggtgaaaaacttcaaggattatgttgatttgtacctgaaagacaaa
gtggatgatgctgataaccaagtgaaagctgtgtatgagaatgttaatgagcggtgggag
gtggctgtggctctctctgacaaaggattccagcagatgtcctttgtaaatagcatagcc
actactaagggtggacgtcacattgactacgtgacagacatgattgtgaaaaacattact
gaaacactcaagaagaagaacaagagtggtgtgcagattaaaccattccagattaagaac
cacatgtggatctttgtaaattgtttgattgtgaaccccaccttcgactcccagacaaaa
gagaacatgactctccaagccaaaagttttggatccaaatgtagtttgtcagacaaattc
ataaacaatgtaatgaagtgcggcattgttgaggcagtcatgacgtgggcaagatttaag
cagcaagcacagctacagtccaaatgtgccaacaggaagcaaaacaaactgaaaggtatt
cccaaactagaggatgctaatgatgctggaacaaaattctcatctgactgcactctcatc
ctcactgagggagactcagctaaagccttagctgttgctggacttggtgtggttggaaga
gacagatacggggttttcccgctcagaggtaaattgctgaatgtacgagaagcatcacac
aataaaatcttagaaaatgctgaaattaacaacattattaaaatcttgggactacagtac
aagaagaagtatgagaactccgaagacctgaagagtctccgctatggcaagctcatgatc
atgacagatcaggatcaggacggttctcacatcaaaggtctgttgatcaacttcatccac
cacaactggcccacccttctcagacacactttcatggaggagttcattactcccattgtc
aaggccacaaagggcaaggaagaactgcccttctactctttacctgaatttgaggaatgg
aagaagaacaaagataactggcctagttacaagataaagtactacaaaggtttgggtact
tccacctcaaaggaagctaaagagtactttcatgatatggtgcgacatagaatccgcttc
aactatggtggggcacaagatgaccactccattcaaatggcctttagtaaaaaagccatt
gaacagcgtaaggagtggttgacagggtggatggaggagtgcaaacgccggaaggaactg
ggtctaccagaagtgtatttgtacgagcgtgacaccagagctatctcatacactgacttt
gtcaataaggaattggttctcttctccaaccttgataatgagcgatccattccatgcttg
gttgatggtctaaagcctggtcagagaaaggtcctcttcacttgtataaaacgaaatgac
aaacgtgaggtaaaagtagctcagttggctggctcagttgcagaacattcagcataccac
cacggtgaagcatctctcatgtcaacaattattaatttggctcagaattatattgggtca
aacaatatcaacttactccagcccattggtcagtttggtactagactgcagggaggcaag
gatcatgccagccctcgatacatcttcacaatgttgagcaaactagccaggtacatattc
catcctcatgatgatcccctgttaaagagcaactttgatgacaaccagcgtattgagcca
gagtggtacatgccaatccttcccatggtgttggtcaacggtgcagaaggtattggtaca
ggttggagtaccaggatccacaactacaatcctcgagaaattgtagaaaatctcaaaaga
atgttgagaggggaagagccaactcgaatgataccatggttcaaggatttcngaggcaca
gttgaagaacttgattcacaaagatgtattgtgcatggagaagttgcaaatttgggtggc
aacaaaatagaaatcactgaactgccagtcagagtttggacccaagcatacaaagagacc
atcctggagggtatgcttgccagttcagagaaatctccagccatgattactgactacaag
gaatatcacactgacacgacagtacgcttcacagtgaccatatcagaagccaagttaggc
aaggccatggaagaaggccttcacaaaacctttaaacttacatcttctctctccacaaac
tccatggtgttgtttgaccacaatggtgttctacggaaatttgaggctgtagaagaaatc
ctccgtgagttctttgatctgcgcctcaagttttacagcaagagaaagcagtatttagta
ggcatgattcaagctgaagcatccaagctgtccaaccaggcaaggttcatcctagagaag
tgtgatggacgtctagtgattgagaacaaaaagaaaaaagaaatgatcgctgaactccaa
cgcaagggctttgattctgatcctgtcaaggcatggaagagagtgcaagacagagaagct
gctatggaggaagaggagcagcagtctgagtctgatcaggaagaagtggattcgaagggc
cctgactatgactatttgcttggcatggcaatgtggagccttaccagggaaaggatagat
gatcttcttaaaaaacgagatgagaagactcaagaattagaagttctcaagaagaagacc
ccagacaacctgtggttgaatgatcttgatgagttccttatgaagcttgatgaagtagaa
caagaggagcgcgatagtgaagcagccgccaacaaaaagggcaacacgggaagcaagaaa
ataaagaagctgaaaaatgagacaatgccatcaccttttggagaaagagtagttccttcc
attgacccagaattgaagaagaaggctgaaaaagcagcagcagcaaaggaaaacaaaggc
aaacggcaggtaaagaaggaagtgttagagaatgatgactttgatgaccttgtggctgct
aacactggcaaatccctttctgcacggctaggaaattcacctgacatgatcttgaagaaa
gcgaaggcaaagaagagtgatggtatgaagcaaacaaagctcagtttcaagaagggatct
ccaaagaagaagaaaggaaagaatccttgggaatcaggatctgaggatgatgatgaggat
gatgatattgatgctgatgatgtccaaccgagagaacgtgctgcagggagacgcactgca
gcagccaaaatcaagttccagttcagtgaagatgaagatagtgacagtaatgaatctctt
catgacaatgctggtatagaagaggcagacgcagcacctcaacaggtgtccattttggaa
gagtctgttgcgaaagtagaaccaaaagaagaggtcgttataagtgatacagattcagaa
tttgatgtaaaacccaagaaaaccactgttgtacctgttgcgcaagagaaacccacagca
tcagatctgtttgactcaatgatgggatcctcaagcccacccaaatatgaacctgaacct
gccatcaaaaaagctcccgccaagaagcgcaccaaggatgacagcagtagtgaggacgac
agcgtgccacagcccaagaaaaagccagcacctaagaagaaggctactgtggtcccagat
gacatgtccgacgatgagcccaagcccaagaagaaaggaggccgtgccaagaagaaggct
tcccctgacaatgacatgtcggatgatgagcccaagcccaagaagaagccaggcccaaag
aagactgctgctgcaaagaagaagaatgactctgattcagatgacatgtttgatgacata
gcccctaagggtaaagcagctttgaacgtgtctgacgacttcaatatttctgaggttgcc
ccaagggagcggtctgggcgacaaaagaaagtaatcacctatgccctaagtgatgatgat
gatgactctgattattag
DBGET
integrated database retrieval system
