Penaeus chinensis (fleshy prawn): 125034883
Help
Entry
125034883 CDS
T08118
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03420
Nucleotide excision repair
pchn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125034883
09124 Replication and repair
03420 Nucleotide excision repair
125034883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125034883
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125034883
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125034883
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
125034883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
125034883
NCBI-ProteinID:
XP_047482887
LinkDB
All DBs
Position
19:3243721..3255452
Genome browser
AA seq
479 aa
AA seq
DB search
MLREDFSDLPRLRHWDFKTKNVNLGTIKSLDSVRLGQLSSFRYRSQLNTCLAASHILSDV
TLTQAEQIGTTFVTHADLECVDSQYLLCGLSDGGVAIYDTLSIKEGRVYAEVGSVKEARE
GAISIRNIQKLIIIQQYIPIDLLCIVDCVQWYPADTGLFTTSSRDKKVKIWDPNCMKPVD
QFRLECHVLHHHMSPVATKHSLLSVGADTGEVILCDMRSGSSAHRLLGHIGPVNVTQWSP
SNQHILASGGRDQTIKLWDVRAGRAHLMDLDMENRTETPNRKKRAKRTPVAHKNRITSLC
FTTDGLWLLSFSYDNDLRLWNSASGENMMVDYGETYTELKRPLRMSVTTNTYPDLVFIPS
ESKILVYEIFSGKMVNVLTGHFSTVLGAVYNPSSMDLYSFGTDRNFITWTPKRLLTNDLP
EEEEEEEEEEEEVAEAEIVEEIQVEERGRERRRVRGAGGGPRRKTRGQVTQDTWSSDED
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgctacgggaagacttcagtgatttgcccagactgagacactgggatttcaagacgaaa
aatgtcaaccttgggacaatcaagagtctggacagtgtccgccttggccagctgtcaagt
tttcggtacagatcccagctcaatacttgccttgcagccagtcacattttgtcagacgta
acacttactcaggcagaacagattggcacaacctttgtaacacatgctgacttggagtgc
gttgactcgcagtacttactctgtggtctgagtgatggcggtgttgcaatctacgacaca
ttgtccattaaagaaggaagggtttacgctgaggttggatcagttaaggaggccagagag
ggagccataagtatcagaaatattcaaaaattgataattattcagcagtacatcccaata
gacctattgtgtatagttgactgtgtccagtggtacccagcagatacaggactcttcaca
acctccagcagagacaagaaagtaaagatatgggaccccaattgcatgaagccggttgac
cagtttcgcttagaatgccatgtcctgcaccaccacatgtcacctgttgcaacgaaacat
tcacttctctcagttggagctgatacgggtgaagtgatcctttgtgacatgcgcagtggt
tcatcagcccaccgtctgcttgggcacattgggccagtgaatgtgactcagtggtcaccc
agcaatcagcatattctagcatcaggtggaagggaccaaaccatcaaattgtgggatgtg
cgtgcagggagggcccacctcatggacctggatatggagaaccgcaccgagacacccaac
aggaagaagcgagccaagaggacccctgtggctcacaagaaccgaatcacctccctttgc
ttcaccactgacggcctgtggttgctctccttcagctatgacaacgacttgcgactgtgg
aattcagccagtggtgagaacatgatggtggactatggtgagacctacacagagctcaag
cgacctctgcgcatgtccgtgactaccaatacctaccctgacctggtgttcatcccttct
gagagcaagatcttggtgtatgagatcttctccgggaagatggtcaatgttcttacggga
catttctccacggtgttaggggcagtgtacaacccctcctccatggacctatatagcttt
ggcaccgatcgtaatttcataacatggacacccaagaggttattgacaaacgatttacca
gaagaggaggaagaggaagaggaggaggaggaggaagtggcagaggcagaaatagtggaa
gagatacaggtggaggagagaggaagagagagaaggagagtgagaggtgcaggtggagga
ccaagaaggaagactagaggtcaggtgactcaagatacctggagcagtgatgaagattaa
DBGET
integrated database retrieval system
