KEGG   Penaeus chinensis (fleshy prawn): 125035116
Entry
125035116         CDS       T08118                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03020  RNA polymerase
pchn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125035116
  09124 Replication and repair
   03420 Nucleotide excision repair
    125035116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchn03021]
    125035116
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125035116
Transcription machinery [BR:pchn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     125035116
  RNA polymerase III system
   RNA polymerase III
     125035116
  RNA polymerase I system
   RNA polymerase I
     125035116
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125035116
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 125035116
NCBI-ProteinID: XP_047483242
LinkDB
Position
19:complement(12094779..12104725)
AA seq 210 aa
MDDEAETYKLWRIRKTIMQLCHDRGYLVTQDELDQTLDQFKEQFGDKPSERHPARSDLIV
LVAHNDDPTDQMFVFFPDEPKVGVRTIKTYCTRMQEENIQRAIIVVQSGMSPSAKQALVD
MAPKYILEQFLESELLINITEHELVPEHVVMTAEEKTELLQRYKLKDNQLMRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYISYRLVV
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagctgagacttacaagctttggcgtatccgtaagactatcatgcagctc
tgccacgaccgtgggtatttagtgacacaagatgaattggatcagacgcttgatcaattc
aaggagcagtttggagacaaaccctcagagcgtcatcctgcaagatcagacctgattgtg
ctcgtagcccacaacgatgatccgacagatcagatgttcgttttcttcccagatgaacca
aaggtgggtgtacgaacaatcaagacttattgcaccaggatgcaggaagagaacattcag
cgtgctatcattgttgtgcaatcaggaatgtctccatctgccaaacaggctttagttgac
atggcgcccaagtacattcttgagcagtttttagaatctgagttgctgatcaacatcaca
gagcacgaacttgtaccagaacatgtggtcatgacagcagaagagaaaacagaattgctt
cagagatacaagctgaaggataatcagcttatgagaatccaggctggagatccagtggca
cggtattttggtctgaaacgtggacaggtggtgaaaattattcgaccatctgaaactgct
ggacggtacatttcgtatagactagtggtgtga

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