Penaeus chinensis (fleshy prawn): 125035153
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Entry
125035153 CDS
T08118
Name
(RefSeq) F-box/LRR-repeat protein 20-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125035153
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125035153
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_8
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
125035153
NCBI-ProteinID:
XP_047483311
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Position
19:complement(25624336..25632579)
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AA seq
434 aa
AA seq
DB search
MHYSRLFHLQLTKVFSDDEALINKKVPRELLLHVFSYLDVVSLCRCAQVSQYWHVLALDG
SNWQRIDLFNFQTDIEGRVVENIGKRCGGFLKQLSLRGCQSVNDAALVTFAEKCNNIEEL
NLNLCKNITDTTCTALSRHCPRLVKLDLDSCSQITDISLKALSDGCPNLEWINVSWCENI
AQNGVDALAHGCPKLKGFVGKGLKSLTDPALISLAQYCKNLEHINLHSCSAISDRGVIAL
AENCVMIRYLCLSNCTHLTDTSLVVLSQHCTHLETLEVAACSQFTDNGFQALARTCHVLE
KIDLEDCVLITDATLSHLASGCPRLEKLSLSHCELITDEGIRHLGVSACSTEHLAVLELD
NCPLISDASLDHLLSCHNLQRIELYDCQQITRAGIKRLKSHLPNIKVHAYFAPQTPQPAE
GRSRQRYCRCCVIL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcattattcccgtttgtttcatctacagttgactaaagtgttttcggatgatgaggcc
ttgataaacaagaaagtaccaagagagctcttattacatgttttttcatatctggatgtg
gtatcgctgtgtcgatgtgcgcaggtatctcagtactggcatgtcttggcacttgatggc
tcaaactggcaacgtattgatctctttaacttccagacagacatagagggtcgtgtggtc
gaaaatatcggcaaacgatgtgggggtttccttaagcagttgtccctgaggggatgtcag
agcgtgaatgacgcagccttggtcacattcgcagagaagtgcaacaatattgaagaatta
aacctgaacttgtgcaagaacatcacagacacaacatgcacagctctgagcagacactgt
ccacgtctggtgaagctggaccttgactcctgttcccagatcacagacatatccctcaaa
gcactcagtgatggttgccccaacttggagtggataaatgtgtcctggtgtgaaaacata
gctcagaatggtgttgatgccttggctcatggctgccccaaacttaaaggttttgttggt
aaaggattgaaatccctcacagaccctgctctcatatcacttgctcagtattgtaaaaat
cttgaacacatcaaccttcacagctgttccgcaatcagcgacagaggtgtaattgccttg
gcagaaaattgtgtaatgataaggtacttgtgtctgagcaactgcacgcatctaacagac
acaagcctggtagttctctcccaacactgtacacacctagaaacactggaggtggctgct
tgctcacaattcacagataatggattccaggctctagcacggacatgtcatgtgctggag
aagattgatctggaggattgtgtgcttatcacagatgccacactaagccatttggcatct
ggatgtcctcggcttgaaaaacttagtctttctcattgtgaacttataacagatgaaggt
atacggcaccttggggtatccgcttgttctactgaacacttagctgttctggaacttgat
aactgtccacttatctcagacgcctctttggaccacctcctctcgtgccacaatttacaa
cgcattgagctctatgactgccagcaaatcacccgtgcaggcatcaagagactcaagagc
cacctacccaatataaaagtgcatgcatacttcgccccccagacaccacagcctgcagag
ggccgttcaaggcaacggtactgtcggtgttgcgtcattctctga
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