Penaeus chinensis (fleshy prawn): 125035212
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Entry
125035212 CDS
T08118
Name
(RefSeq) ATP-dependent RNA helicase DDX3Y-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125035212
03041 Spliceosome [BR:
pchn03041
]
125035212
03036 Chromosome and associated proteins [BR:
pchn03036
]
125035212
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125035212
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125035212
mRNA cycle factors
Common to processing body (P body) and stress granule
125035212
Spliceosome [BR:
pchn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125035212
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125035212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
125035212
NCBI-ProteinID:
XP_047483411
LinkDB
All DBs
Position
19:complement(25457776..25505983)
Genome browser
AA seq
794 aa
AA seq
DB search
MSNVPTHNGVGLEQQFAGLGLEGRDHIGQRGGGRGSGSRGGGRYVPPHLRNRLEDAPPPD
TSDRNSRDGFGGWYGSRGSQDSGRGWDQDRDRDRDRDRDLYSYSKCVGPPAFWGIYSPPL
PYGIMQQGGRRNGDFQPSYQQRDNRGGGGGGGGGGGGGYRSNDGQRFREHDDRWRGGRGD
NRRDDRRGYEDRREVGGSGPPRNNRWIEDDRDRSSGGGGGGGGGGGGQGGGRWQDRGNDR
DDWSQPLARNEVLEAELFNNVGPSTNSGINFDKYDDIPVEATGEDIPTCINTFADIKLTE
IIKQNISMARYDRPTPVQKYALPFILAKRDLMACAQTGSGKTAAFLVPILNQIYEQGPVQ
VKNNNPRGRNKQYPLSLILAPTRELATQIYEEARKFSYRARVRPCVVYGGADVVSQMRDL
SRGCHLLVATPGRLADMIDRGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEEDNMPPT
GQRQTLMFSATFPKEIQRLAQDFLDNYIFLAVGRVGSTSENITQKIVWVSEDDKRSFLLD
ILNAAGLDRATEANKDEKMAMGVPPRREESLTLVFVETKKGADALEEFLYRHGYPVTSIH
GDRSQREREDALRVFRSGQCPILVATAVAARGLDIPHVKHVINFDLPSDIEEYVHRIGRT
GRMGNLGLATSFFNDKNRNMVRDLVELLQEAKQELPKWLEAIASEARFGGGGGRGRAGAK
RFGGGFGSRDYRQADRSKGPHTAGPARPGGGFNSFGGAAPHFNHYGGYGGFSGSQGYNSY
NTSGASGTDWWGGN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtacccacccacaatggagtaggtctagagcagcagtttgctggtctaggc
ttggaggggcgagaccacattggtcaacgtggaggcgggcggggcagtggcagtagggga
ggtggccgctacgtcccaccccacttaaggaatcgcctagaggacgctccacccccagat
acttcagataggaattctagggacggtttcggtggttggtatggttcccgagggtcccaa
gactctggtcgtggttgggaccaggacagagacagagacagagaccgagaccgagaccta
tacagctacagtaagtgcgtaggccctcctgccttttggggtatctacagtcctccgtta
ccttatggtatcatgcagcaaggtggacggaggaacggggacttccagccaagttatcag
cagagggataacagaggaggcggaggaggaggaggtggtggtggtggtggtggctacagg
agcaatgatggtcagcgcttcagggagcatgatgaccgctggaggggaggacgaggagac
aaccgcagggatgaccgccggggttacgaagaccgtcgtgaggtaggagggagtggccct
ccacgcaacaatagatggatcgaagatgatcgtgaccgctcttcgggtggtggcggcggc
ggtggcggtggcggcggcggccagggaggtggccgatggcaggaccgtggaaatgataga
gacgactggtcacagcctcttgccaggaatgaggtccttgaggcagaactcttcaataat
gtaggtccatcaaccaacagtggaatcaattttgataagtatgatgacattcctgtggag
gcaactggcgaagacattcctacttgtatcaataccttcgccgatatcaaactcacagag
atcatcaaacagaacattagtatggctcggtatgacaggcccacaccagtccagaaatat
gccctgcccttcatacttgcaaagagagatctgatggcatgtgctcaaacagggtcggga
aagactgctgcattcttggtccctatccttaaccagatatatgaacagggtccagtccag
gttaaaaacaacaaccctagaggacgtaataagcaataccctctgtctctgattttggcc
cccactcgtgagttggccacccagatctacgaggaagctcgcaagttctcttatcgggcc
cgagttcgtccatgtgtggtgtatggtggtgctgatgtcgtgtcacagatgagagatctg
tcccgtggctgccacctcttagttgctacccctggacgtctggctgacatgattgaccgt
ggaaagattggtcttgattattgcaagtacctggtactcgatgaggctgaccgcatgctg
gacatgggttttgagcctcaaattcgccgtattgttgaggaggacaacatgcctcccact
ggccagcgccagactctcatgttctccgctaccttccccaaagaaatccagcgacttgcc
caggatttcttggacaactacattttcttggctgttggacgtgttggttccacttctgag
aatattacacaaaagattgtctgggtgtcagaggacgacaagcgatccttccttcttgat
atccttaatgctgctgggttagaccgtgcaactgaggccaataaagatgaaaaaatggcc
atgggtgtaccccctcgcagagaagaatccctgacgttagtgttcgttgagaccaaaaag
ggtgcagatgcccttgaggagttcttgtaccgtcatggataccccgtgacgagcattcat
ggcgaccgaagccaacgtgagcgagaggacgctcttcgtgtcttccgctctggccagtgc
cccatacttgtggcaactgctgtggctgctcgtggtttggacattccacatgttaagcat
gtcattaattttgatttgccatcagacattgaggagtatgttcaccgtatcggtcgaact
ggtcgtatgggtaaccttggccttgccactagtttcttcaatgacaagaatcgcaacatg
gtacgtgacttggtagaactcttacaagaggccaagcaggagcttcccaagtggctagag
gctattgcctctgaggcacgctttggaggtggaggaggaagaggccgcgcaggagccaag
cgcttcggtggaggttttggatcccgagattaccgtcaggctgaccgcagcaagggcccc
cacacggcagggcctgctcgtccaggtggaggcttcaacagctttggtggagctgctcca
cacttcaatcattatggagggtacggaggtttcagtggaagccaaggctacaatagctac
aacacctctggcgcttcagggacagactggtgggggggtaactga
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