Penaeus chinensis (fleshy prawn): 125035232
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Entry
125035232 CDS
T08118
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125035232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125035232
Enzymes [BR:
pchn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125035232
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125035232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cut8
RVT_N
Motif
Other DBs
NCBI-GeneID:
125035232
NCBI-ProteinID:
XP_047483446
LinkDB
All DBs
Position
19:complement(15655124..15674124)
Genome browser
AA seq
1391 aa
AA seq
DB search
MKEQYRETDVVRNILDIQFGVLSAQDMQQCSHAHIVSSELYNPNANAREPASHGVLDRRM
GTSQKDVTCETCGKNLSDCIGHYGYLDLARPVFHVGYFKNTIHILQNICKFCANVLLKPK
DKLALCEQSKRLSSYLQKKALYKRVNELCKKMSLCSYCSARNGTVKKLPPLKIVHERFKT
VKKGDPVLTDYFTQFDTALEYNKELEAQLASNVVEFLNPSQVLDLFERIPLSDLPLLCMD
QQFSHPKDLILTRLLVPPNCIRPSVISELKSGTNEDDITVMLTEIIFLNNLINKRSSGKV
QSIQDSWEHLQLHVAFLMNSEISVPHDLNMARKSTRGFVQRLKGKQGRFRGNLSGKRVDF
SSRTVISPDPNLRINEVGVPVEVAKQLSYPEKVTSHNTNLMRQLVRNGPDVHPGALFVEP
KSTPGIKKSMRYVHRERMASELKPGDIIERHLMDGDIVLYNRQPSLHKMSIMSHRVRVLP
WRTFRFNECVCTPYNADFDGDEMNLHVPQTEEARAEALVLMGVTSNLVTPRHGALIIGAT
QDFITGSYLLTQKDQFFDKEHTCALVASILAGKEADYKVDLPPPAIMKPQELWTGKQIFS
LIIRPNKSFPVACNLMAKRKDYTKGEELCANEAWVVIRNSELLAGALDKSLLGSGSKKNL
FYVILKDYGKDHAADAMWRMARVSTLFLMDRGFSIGIGDVMPGSGLLTRKQELLDEGYRK
CDEFISQLKEGTLHCQPGCTAEETLEQLILKELSTIRDKAGKACVMELHKTNAALIMAIS
GSKGSFINISQMIACVGQQAIGGKRVPNGFEDRALPHYERHSKIPAAKGFVSNSFFSGMT
PTEFIFHTMAGREGLVDTAVKTSETGYMQRRLVKSLEDLYVAYDMTVRNSTQDIIQFKYG
GDGLDPSEMEGTKGPIDLERVLNHIRATHPYASEDPLAGKEVLQLGEKYLEDDAFKELSP
EFKEELKTFLEKYSKRVDKIQSRIIKATTKGKALPVERQLERLTFTQLIDFLNSCLDRYQ
SAVMEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVAAMNITLGVPRILEIINASRSISTP
IITAKLKCDTDPEKARQVKGRIEKTLLGEVCEYVEEVFLPDDCFLLLKLAMDRIRLLKLE
VDAYSIKYAICTSKLKVKEMDVCVESDTILTVRPSKTKVSSMYYQLQHLKQHITKVIIKG
LPSVNRAVINQNDTSGLSQYELLVEGDNLQEVIATYGVDGTRCTSNNTYEVFTSLGIEAA
RATIIKEITVTMETHGLSVDHRHVMLLADLMTCRGQVLGITRHGLSKMKESVLMLASFEK
TADHLFDAAYHGQSNPIKGVSDCIIMGKPMNIGTGVFKLLHSHKRDNKPRSRNLIFDHPE
LHIPLVHNGWS
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcagtatcgggagacagatgttgtccgcaacatcctggacatccagtttggg
gtgctgtcggcacaggacatgcaacagtgcagtcatgcgcacattgtgtcatcagagctc
tataacccgaatgcaaacgccagagaacctgcctctcatggtgtcttggatagaagaatg
ggtactagtcaaaaagatgtgacgtgtgagacctgtggcaagaacttatcagactgcatt
ggtcattatggttacctggaccttgctcgaccagtgttccacgtcggctacttcaagaat
acaatccatatcctccaaaatatttgtaaattctgtgcaaatgtacttcttaaaccgaaa
gataaacttgcgctctgtgagcagtcaaagagattaagctcatacctgcagaagaaggct
ctatacaagcgtgtaaatgaactttgcaagaagatgagcttgtgttcatactgcagtgcc
agaaatggaactgtgaaaaaactaccacctctcaagattgtccatgaaagattcaaaaca
gttaagaagggggatcctgtgttgacagactattttactcagtttgacacagcattagag
tacaacaaagagttagaggcacaattggcctccaatgttgtggagttcctgaatcctagt
caggtcctcgatctgtttgagaggattcctctctcagacttgccactcctgtgcatggac
caacaattttcgcatccaaaggatctcattcttacacgactgttagtccccccaaactgc
ataaggccatctgtgatctcagaactgaaatctggaacgaatgaggatgacatcacagtc
atgcttaccgagatcattttcctgaacaatctgatcaacaagagaagctctgggaaagtg
cagagcatccaggactcgtgggaacacctgcagcttcacgtggcattcttgatgaattcg
gagatatcggtgccacatgatctcaacatggcgcgaaaatcaacgcgagggtttgtccag
aggctgaagggcaagcagggccgtttccgaggaaacttgtcaggaaaacgtgttgatttc
tccagccgtactgtcatctctccggaccctaatctcagaatcaatgaggtgggtgtccca
gtggaagtagcaaagcagctgtcctaccccgagaaagtgacatcacacaacacgaacctc
atgcgtcagctggtgcggaacggcccagatgtccatcccggggctctgtttgtggagcca
aagtcgacaccgggcatcaagaaatcaatgagatacgtgcatagggagcggatggccagt
gagctgaaaccaggggacattattgagagacacttgatggatggagacattgtcctatac
aaccgacagccttccttgcacaagatgagcatcatgtcccacagagtcagagttctccca
tggaggacctttaggttcaatgagtgtgtctgcactccttataatgctgattttgatggt
gacgagatgaaccttcatgtgccacagacagaggaggcgagggcagaggcattggtgctt
atgggggtaacctccaacctggtgaccccaagacacggagcgctcatcattggcgcaacc
caggatttcatcacaggctcctacctcctcacgcagaaggaccagttctttgacaaggaa
cacacctgtgcccttgtagcctccatcttggcagggaaggaggctgattacaaagtagat
ctaccacctcctgctatcatgaagcctcaggagctgtggacaggcaagcagattttcagt
ctgatcatccggcctaacaagtcatttccagtggcttgcaacctgatggccaagcgcaaa
gactacacaaaaggggaggagctatgtgccaatgaggcgtgggtggtgatccgtaactca
gagcttcttgcaggggctcttgacaagtccttgctaggctcaggttccaagaaaaatctt
ttctacgtcatcctcaaggactatggcaaggaccatgcagctgatgctatgtggaggatg
gctagggtctccacactgttcctgatggaccgtgggttctccatcggtattggagacgtc
atgccaggatcagggctcctcaccaggaagcaggagctccttgacgaagggtacaggaaa
tgtgatgaattcatctcgcagctgaaggaaggcacgctgcactgccagccaggctgcact
gcagaggagactttagagcagctgatcctgaaggagctcagtaccatccgagacaaagca
ggcaaggcttgtgtcatggaactgcacaagaccaatgctgcactcatcatggccatctct
ggttccaaaggttccttcatcaacatctcacagatgattgcgtgtgtcggacaacaggcc
attggaggcaagagagttcccaacggctttgaggatcgtgcactgccacattatgagagg
cactcaaagatccctgcagccaagggtttcgtgagcaacagcttcttctctggcatgaca
cccacagaattcatcttccataccatggctggacgagaggggctggttgacacagctgtc
aagacctcagagaccggctacatgcagcgtcgacttgtcaagtccctagaagacttgtat
gtggcatatgacatgacagtgcggaattcaacacaggatattattcagttcaaatatgga
ggtgatggtctagatccctcagaaatggagggaacaaagggccccattgacctggagcgc
gtcctgaatcacattcgtgccacccacccctatgcaagtgaggaccccctagctggcaag
gaagtgctacagcttggtgagaagtacctagaagatgatgccttcaaagagctttcacct
gagtttaaagaggagctcaagaccttcctggaaaagtactccaaaagggtggataagata
cagtcacggatcatcaaagcaaccaccaaggggaaagccctgccagtagaacgtcagctg
gaacgcctaacttttacacagctcattgactttctcaactcatgcctcgatcgctatcag
agtgctgtgatggagccgggcactgcagtgggtgctctctgtgcccagagtattggagag
ccaggcacacagatgactctgaagactttccattttgctggagtggctgcgatgaacatt
acccttggtgtgccaagaatcctggagatcatcaatgcatcgcggagcatttcgacaccc
atcatcacagccaagctcaagtgtgacactgacccggagaaggcacggcaggtgaaaggt
cgcattgagaagaccttgctgggggaggtttgtgaatatgtggaggaggtgtttctgcct
gatgattgcttcttgctgctcaaactggccatggaccgcatcaggcttctcaagcttgag
gtggatgcctactccattaagtatgccatctgtacatccaagctcaaggtgaaagagatg
gacgtgtgcgtggaatcagacaccatcctcaccgtccggccctcaaagaccaaggtgtcg
tccatgtactaccagttgcagcacctcaagcagcacatcaccaaggtcatcatcaagggc
ctgccatctgtcaatcgggctgtcatcaatcagaacgacacaagtgggctttcccagtat
gaactgcttgtggaaggtgacaacttgcaggaagtcattgcaacatatggtgttgatggc
acacgttgcacttcaaacaacacttatgaagtcttcacctcattagggattgaggcggca
agagcaacgatcatcaaagagatcacagtgactatggagactcacggcttgagtgtggac
cacaggcacgtaatgctgctggctgacttgatgacctgtcgtggccaagtgctgggcatc
actcgccatgggctgtccaagatgaaggagtcagtgctgatgcttgcctcgtttgagaag
acagctgaccacctgtttgatgctgcctaccatggccagagcaaccccatcaagggcgtg
agtgactgcatcatcatgggaaagcccatgaacattggcacaggcgtgttcaagctcctc
cacagccacaagagagacaataagcccagaagccgcaaccttatctttgaccacccagag
ctccatatcccccttgtccacaacggctggtcttga
DBGET
integrated database retrieval system
