Penaeus chinensis (fleshy prawn): 125035258
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Entry
125035258 CDS
T08118
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchn03041
]
125035258
03016 Transfer RNA biogenesis [BR:
pchn03016
]
125035258
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125035258
Spliceosome [BR:
pchn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125035258
Transfer RNA biogenesis [BR:
pchn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
125035258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
125035258
NCBI-ProteinID:
XP_047483483
LinkDB
All DBs
Position
19:complement(15261531..15286935)
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AA seq
735 aa
AA seq
DB search
MAAFEEMGVMPEIAKAVEEMDWSLPTDVQSEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDIQQGKTSKVNKEVSPHWLMSFFDRDAGMAVTPDGLRCQSRDPKSWQGVRG
TKGVVGKGKYYYEATVSDEGLCRVGWGTPQAALDLGTCKAGFGFGGTGKKSNCRQFDDFG
EPFGLKDVIGCYLDLDAMEIRYSKNGTDLGKAFTLRSEFKNATFLPAVVLKNAEMSFNFG
ATEFKFPPKGGFMAICQAPKDCTVTSGVRGGDKPQKVENNAPQAIIIEPSRELAEQTLTQ
LKMFHKHLDNPVVRDLLVVGGIPVKDQIAALNSGIDIVCGTPGRLEDLINTGQLSLQSCK
FFVLDEADGLLKQGHERLVNNIHSAIPKITSDGKRLQMIVCSATLHSFEVKRMAERLMHF
PTWVDLKGEDAVPETVHHVVVTVDPRADTTWTTLRRHTPTDGVHQKDNVRPGNNTPETLS
EAVKMLKGEYCLKAIDTHKMDKALIFCRTKLDCDNLERYFNQIGGGPKNPANPYSCVCLH
GDRKPNERKANLETFKNGRVRFLICTDVAARGIDVNGLPFIINVTLPDEKSNYVHRIGRV
GRAERMGLAISIVAAVPEKVWYHGEWCPTRGRNCYNTRLTTEKGCCTWYNEPQYLADIEE
HLGVTIQQVDKEMKVPVDEFDGKVVYGEKRAAAGSNYQTHVEQLAPAVKELAELERQTQT
IYLKRQYGKEYPWTR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttcgaagaaatgggcgtaatgccagagatagccaaagctgtcgaggagatg
gactggtcactccccacagatgtgcaaagtgaagctgtgcctctcatcttaggaggcgga
gatgtgctgatggccgctgaaacgggcagtggcaagacgggagctttctgcctgcccatc
ttgcagatcgtgtgggagacgctcaaggacatccagcagggcaagacgtccaaggtcaac
aaagaagtctcaccccactggctcatgagcttctttgaccgtgatgcgggcatggcggtg
acccctgatggcctgcggtgccagtcacgtgaccccaaatcctggcagggcgtccggggc
actaagggggttgtgggcaagggcaagtactactacgaggccacggtctccgacgagggg
ctgtgccgcgtgggatggggaacaccgcaggctgccctagacttaggcacgtgcaaggca
ggttttggctttggtggaactggcaagaagtccaactgccgtcagtttgatgactttgga
gaaccctttggcttgaaagacgtgatcggctgctacttggacctagatgccatggagatc
cgctacagtaagaatgggacagacctgggcaaggccttcacccttcgtagcgagttcaag
aatgccaccttcctcccagctgttgtgctcaagaatgcagagatgtccttcaactttggg
gcaacagaattcaagtttcctcccaaggggggctttatggccatctgtcaggctcctaag
gattgcacagtgacctcaggcgtcaggggcggagacaagccgcagaaggttgagaacaac
gccccacaagccatcattattgagccctctcgggagctagctgagcagaccttgacgcaa
ctcaaaatgttccacaagcacttggacaatcctgtagtacgtgacttgctggtggtaggt
ggcattccagtgaaggaccagattgcagcgctcaactcaggtatcgacattgtatgtggc
actcccggtcgattggaggacctcatcaacacagggcagctctcactccagtcgtgcaag
ttctttgtacttgatgaagcagatggtctgctgaagcagggacacgaacgcctcgttaat
aacatccacagtgccatccctaagatcacatctgatggaaagaggctccagatgattgtc
tgttctgctacactgcattcctttgaggtcaagcgcatggctgaacgcctgatgcacttc
ccaacatgggttgacctgaagggagaagatgctgttcctgagactgtccaccatgttgtt
gttacggttgacccacgtgctgacaccacctggaccaccttgcgacgccatacccccaca
gatggagtgcaccagaaggacaatgtgaggccaggaaacaatacaccagaaaccctgagt
gaagctgtgaagatgctgaaaggagaatactgtctcaaagcaatcgacacccacaagatg
gacaaggctttgatcttctgccgcacaaagcttgactgtgataacctagaacgctatttc
aatcagattggtggaggacccaagaatcctgccaatccctactcctgcgtatgcctccac
ggtgatcgtaagcccaacgaacgcaaagcaaatcttgaaaccttcaagaacgggagagtc
aggttcctcatttgcaccgatgttgctgcccgtggaattgatgtcaacggcctgcccttc
attatcaatgtgactctgccggacgagaagagcaactacgtacatcgcattggccgtgtg
ggccgagcagaaaggatgggtctggctatctccattgttgcagctgtgccagagaaagta
tggtaccacggtgaatggtgtccgacgagaggacgtaactgttacaacactcgcttgacg
acagaaaagggttgttgtacgtggtataatgaaccccagtacctggctgacattgaggaa
cacctgggagtgaccatccagcaggtggacaaggagatgaaggttcccgtagacgaattt
gacgggaaggttgtctacggcgagaagagagcagccgcgggttcaaactaccagacgcac
gtggaacagctcgcccctgccgtgaaggagctagcagaactagagcgacaaacgcagacc
atctacctgaaacgccagtacggaaaggagtatccctggacgcgataa
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