KEGG   Penaeus chinensis (fleshy prawn): 125035299
Entry
125035299         CDS       T08118                                 
Name
(RefSeq) negative elongation factor A-like isoform X1
  KO
K15179  negative elongation factor A
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125035299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchn03021]
    125035299
Transcription machinery [BR:pchn03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     125035299
SSDB
Motif
Pfam: NELF-A_N Presenilin
Other DBs
NCBI-GeneID: 125035299
NCBI-ProteinID: XP_047483549
LinkDB
Position
19:21591756..21604658
AA seq 645 aa
MAAARDSDISLWLHNKLGTSADTWSEGSICSQLNVEVLRNIKECFVELQTQVKLKLLLSF
FHIPKRNVEEWRTELEEILEVAVVDSEAWVAMLAEIMRTCPSTGHLNLDIREPPENQRIT
HDLITELRKLVKKYSELGLLPMECNYLNRNAFLAAAGSQAPHTKHFALKRKPKAAALRAD
LISRSSDAQANVKKSQLPTVPVRSRGMPRKMTDTTPLKGIPSRLPGSGLRGSGLGSTPVS
RPLVRPSVTRKDGGIKLLDITESPIAAQQSKKRRKLQDTADAKAAEAEEKRREQQQQGEG
KQAAQQQQQQQQQQQPTTPEYAVGLGTTNPETPSPATPSAPLLSASAGGASTLHTNAVAV
GTIAARSTLQQTSTSTGRATPTLPATPSGGTTPQRIIVTPSTQAAGSPTVVYRTVSHTPV
YTTTEVIQASTDSVSPTTREGTPNGQPQYATLQPVQPDLVYTTTPLTTATLAPAATPTTQ
QQQQPAQQQQQQQQQQQQPQQQQAPQQQQAPQVITVAAAAATQQENAQPQQVPINQTTVT
TQQQQQKRGLSLTREQMLEAQEMFRSSNKVTRPEKALILGFMAGSRENPCPHLGNIVTIK
LSEGEETVPQPEGTFINMMAETHFQMNYNTGEWKRIKKYRPLPVE
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggcagccgcacgggacagtgacatctcgctgtggcttcataacaaactcggaacctcc
gcggatacgtggtctgaaggctctatatgttcgcagctgaacgttgaagtactcaggaac
attaaggaatgctttgttgagctgcagacgcaagtgaagctgaaattattgctgtctttc
ttccacatcccgaagcgcaatgttgaagagtggcgcacagagcttgaggaaatcctggag
gtggcagtggttgacagtgaagcctgggtagccatgttagctgagattatgaggacctgt
ccatccacaggtcacttgaatcttgatatcagagaacctccagagaaccaacgcatcaca
catgacttaatcacagaattgcgtaagctggtgaaaaagtatagtgaacttggcctcctg
ccaatggaatgtaactacctcaatagaaatgcctttctagcagcagctggcagtcaggct
cctcatacaaagcacttcgcactgaagcgtaagccaaaagcagctgctcttcgagctgat
ttgataagtcggtcatcagatgctcaggctaatgttaaaaagagtcagctacctacagtg
cctgtacgctccagaggcatgccacggaagatgactgataccacacctctgaaaggcata
ccaagtcgtctccctggctcagggttaagagggtctggtcttgggtccactcccgtctca
cgacctttagtgcggcctagtgttacacgtaaggatggaggcattaaactcttggacata
acagagtcacccattgctgctcaacagtccaagaaaagacgaaagttacaagatacagca
gatgcaaaagcggctgaagctgaagagaaacgtagagaacagcagcagcagggagagggt
aaacaggcagcgcagcagcagcaacagcaacaacagcaacagcagccaaccactccagag
tatgctgtcggcttgggtactaccaaccccgaaactcccagtccagccactccctctgct
cctctgctttcggcttctgctggaggggcttcaacattacatacaaatgctgtggcagtg
ggaactatagcggcaaggtcaacgctacagcagacctcaacttctacaggtcgtgccact
ccaactcttcctgccactccttctggtggaacaacaccacaacggatcattgttactcca
agtactcaagcggcaggttcaccaactgttgtttaccgaacagtttcccacacccccgtt
tacacaacaacggaagtcatacaggcttcaacagacagtgtatcaccaacaactagagag
ggaacacctaatggccagcctcagtatgctacattacagcctgtgcaaccggaccttgtt
tacactacaacaccattaacaacagctactctggctcctgctgctacaccaacaactcag
cagcaacagcagcctgcacagcagcagcagcagcagcagcaacagcagcagcaaccacag
caacaacaggcaccacagcagcagcaggcaccacaggttattacagttgcagcagcagca
gcaactcagcaagaaaatgcacagccacagcaagtgcctatcaatcaaacaacagttaca
actcagcaacagcagcagaagcgtgggttgtctcttactcgagaacaaatgttggaggcc
caagagatgttccgttcaagcaacaaagttacgcgaccagagaaggcccttattcttgga
ttcatggctggatctcgagaaaatccttgtcctcatctgggtaacattgtgaccatcaag
ctgagtgagggagaggagacagttccacaaccagagggcacctttattaatatgatggca
gagacacacttccaaatgaactacaacacaggagaatggaagaggataaagaagtacaga
cccttgccagtagagtga

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