Penaeus chinensis (fleshy prawn): 125035762
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Entry
125035762 CDS
T08118
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchn03009
]
125035762
03012 Translation factors [BR:
pchn03012
]
125035762
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125035762
5.6.2.5 RNA 5'-3' helicase
125035762
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
Other ribosome biogenesis factors
125035762
Translation factors [BR:
pchn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125035762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
SMUBP-2_HCS1_1B
AAA_30
AAA_19
AAA_12
ResIII
AAA_22
UvrD-helicase
Viral_helicase1
AAA_16
SLFN-g3_helicase
Flavi_DEAD
DnaB_C
AAA
nSTAND3
DEAD
PhoH
NPHP3_N
AAA_33
AAA_25
HEM4
ABC_tran
cobW
Cep57_MT_bd
ATPase_2
RuvB_N
NB-ARC
Motif
Other DBs
NCBI-GeneID:
125035762
NCBI-ProteinID:
XP_047483924
LinkDB
All DBs
Position
2:complement(38747577..38754992)
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AA seq
533 aa
AA seq
DB search
MSKEKTQLSRNDWIALHCSLLEEERKAEVSAAQSEVEGASLKVLEARGVVLGHLVISERS
TGLYGRPIITFVPARKDAVLPANNFSSGDIVGVYESGSGQQCTTGVVKYVSQKNIQIVLD
DDADELDNLSDDTQLRLNKLANDVTYRRIKSGLNGLEKLINGPAAHTVSVLFGESPPRSI
APSLPPQLMGAEGKIQLFNKNLDNSQREAVEFAIQRSDLAVVHGPPGTGKTTTIVEVIRQ
HVKLKSKVLACAPSNLAVDNLVERLAAAKVRVVRVGHPARATALTQRYTLDCLMHHSDES
QLLKDIHRDINEQLKQLKTARDRGKRQHIRREIKTFRKELYEREMRLTKQILTNSDVILA
TLTSSSNDGPLKLLREDFFDVVVIDECSQAIEAACYMSLLRAPKLIIAGDHCQLPPTIVS
KEAAEKGLELSLMERIINQCGDEVVRMLTMQYRMNTDIMQWASTAMYQDRLIAHSSVASH
LLHQLQGVTTNEDTGTVHQPFIFFLKCLAYVCCFFADLPLLHGSVFKRGCYPV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggaaaaaacccagctgtcgcgcaatgattggattgccctccattgctcgctg
ttggaagaggagaggaaggcagaggtcagcgctgcacagtcagaggttgaaggagcatcc
ctcaaggtcttagaagcaagaggagtggttttagggcatttagttatcagcgagagatcc
actggcctctatggacgccccatcatcacatttgtccctgcaaggaaagatgctgtttta
cccgcaaataatttttcttcaggtgatattgttggtgtatatgagagtggatcaggccag
cagtgtacaacgggagtggtaaagtatgtctcacagaaaaatatccagattgttcttgac
gacgatgctgatgagttggacaaccttagcgatgacacgcagctgcggctgaacaagcta
gcaaatgatgttacatacagaaggataaaatcaggactgaatgggcttgaaaagttgata
aatggcccagctgcacacacagtgtctgtgctgtttggtgaatcacccccaaggtctatt
gctccttccttaccaccacaacttatgggagctgagggcaaaatacagctctttaataaa
aacctggacaattcgcagcgggaggcagttgagtttgccattcagaggagtgacctggcg
gtggtccacggcccccccggcacagggaaaacaacgaccatcgtggaggtcattaggcag
catgtcaaactcaagtcaaaggttctagcctgtgctccatcaaacctcgctgtggataac
ctggtagagagactagcggcagccaaggttcgtgttgtgcgtgttggtcatccggcacgc
gccactgcactcacccaacgctatactcttgactgccttatgcaccacagcgatgaatct
cagttactgaaggacattcatcgtgatattaatgagcaactcaaacaactgaagacggcc
agagacagaggaaagaggcagcacatcaggagggaaatcaagacttttaggaaggagtta
tatgagagggagatgagactcacgaagcagatcctgacgaacagcgatgtgatcttggcc
accctcacgagtagtagtaatgatggcccccttaagctcctgagggaggatttctttgat
gtggtggtcattgatgaatgctcgcaggctattgaggctgcctgttatatgtcactcctc
cgagccccaaagttgataatagcaggcgatcactgccagcttcctcctaccatcgtatcc
aaagaagcagcagagaagggcttggaactctcacttatggagagaattataaatcagtgt
ggggatgaagttgtcaggatgttaaccatgcagtaccgcatgaatactgacatcatgcag
tgggcatcaacagccatgtaccaagatcgcctaattgcccactcctctgtagcctcgcat
cttcttcatcaactacagggagtgacgaccaatgaagacacaggtacagttcaccagcct
tttatattttttttgaaatgtcttgcatatgtttgctgtttttttgcagatttacctttg
ttgcatgggagtgtgtttaaaaggggttgttatcctgtttga
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