Penaeus chinensis (fleshy prawn): 125035790
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Entry
125035790 CDS
T08118
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03440
Homologous recombination
pchn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125035790
03460 Fanconi anemia pathway
125035790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125035790
03036 Chromosome and associated proteins [BR:
pchn03036
]
125035790
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125035790
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125035790
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125035790
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
125035790
FA (Fanconi anemia) pathway
Downstream FA components
125035790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
BRCA-2_OB3
BRCA2DBD_OB2
RMI1_N_C
Motif
Other DBs
NCBI-GeneID:
125035790
NCBI-ProteinID:
XP_047483960
LinkDB
All DBs
Position
20:3452414..3473202
Genome browser
AA seq
1690 aa
AA seq
DB search
MEHSGGTVTFKAEKFELPLSQSLKSEASEAMDDSFNDIDFAEIDWNFCVPNAKTETDHRS
GKDLADDRSLKGDSEDAGKGTKGFCGFSTGLGKSVKVSDKALQHAKKLLEDTLEDEYVKD
KVTNKEDIEAYPNSVSKNTGVKTVLRHNKKSVSSNFESSEYIMGTDAKCEDSSGDANYCC
LFNGCNSVSGNLNLQSHQTEASSPVSENLFHHKADQLACLEKVSKESTSNAKLVQDTNIG
FKTARGTNIVVNPEALNKVKRLWAEEMKLEDQQVQTLSVMDDTEFGFKGKETIFDSNIKF
PKNLQIGNAMPGFATAAGKALTVSEKALKKAQGLLEESSEEAKLHYNNLSGSVDSTRQVL
REEKEGRTIQNQRSNTPALKDEARDIMNRENYQESKTSSSSAVLISHKQMDETKKLTEEL
ADVDGKCSGDKLSCAQVKGPTKSRDFEHLQQFGGFSTARGTKVRISNAALLRARKLWEED
DTTSGDLPDPKFGNTLQSMVSSEVSETQTKEREKSLHSNKEAIAPSPNNFLGFCTGQGKP
VEVSKESLARNRNIFEDIDIPEDEKSHGTRAEVLQPECKSKDFADVGGRNLEVNGGYEVG
NTNSVLDLEEKLAGEEKAYNLNQNFNSHRGFVTGRGKCVEVKKETLERVSKMFMDENDII
ECEKNLEYNENNLRNLGILNMDGENASKKEKLREHEDEHIEETIDFPVKEQHCAGSQKTT
TRLAALDRGVPIKCGKRKFSELGLAELDPDKQIARPSNKRLSLGNSRNTNGIPRKSISKL
GRRGHSQSAKTSHEMHLSPAAKSQSQPTLLAPSPHPLPPESHTKAQDSLQTLGKITALTD
TQEICAITEAFLEDDLREGKDSLESFNRKRSREASGYDGPSGKKFRVPQMPCSQMEDAET
YAADEVVESGREMARLKQRKVAQYKEKRPVTPIQGVLHRFRSDKKHSRIKMQSLGSLKVN
RNVSCEVASINASNARMFRFPVKDRRCETVTCEDGCTLVPSSDGFIGVKEIEQGFLAAPG
VHPGLVPPSWVINHYRWIVWKLAALERRLPHSTLTPENVMARLKYRYDREIDRAERPILR
KIMEHDDVPQKTMILCVAHVKKTPETTHEGDGVTETRPRSPYAASETILELTDGWYSIDA
LTDTALSRFVLEEKVKIGTKLLIHGAEMAKHSPPCHPLQASSSVCLRLHTNMTRRAKWWS
RLGLAPQCGPLPTLIRGIQGDGGLVGRLTVLLARVYPPLYFEKTGGKSVFRSERAHNRLL
RENQREKERNVHQILAEVEREFDSRAVSQRQSRKTSSSVLRGEEIRNLTSGKDIAQVMEE
AMDPSSLEGLLSTHQIELARSWRQREAEERKRLINLEVQQRLAKKQKLYEAVTILKIRIV
DTEGGSALVTIWRPTEEIIQALTEGTVFSVHYLCANGHKYGDLQLTATRQTRWERLTSPS
LSHFQDVSREVTPLCLTSSGELAPLWREVDVVGIVLRVGGLEAGCQLVHLVDHQVNILAL
KFWGGIKECGMEDKVQVGVLLCVSNGSWRGHTGGRFGCVHITELTAVTTQPRRPHLEEQA
SHLKRSVENMKTLLCDGDMKLDGQFNERVSPEGGTSPSQEQSRVGQENGQGSTVHENAQG
DYEKEHKDGTPSTGLGRLQQRSREIRSKFKALGSYGTPSALRSLKSPASRGTHKPFRMPF
RQPLDSAKNQ
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggagcattcaggaggtacagtcacttttaaagcagagaagtttgagctgcccttaagt
cagagtctaaaatcggaagcaagtgaagccatggatgatagttttaacgatattgatttt
gcagaaatagactggaatttttgtgttcctaatgcaaaaacagaaactgatcataggtca
ggaaaagatttggctgatgatcgctccctgaaaggggatagtgaagatgctggtaaagga
accaaaggcttttgtggattttcaactggcctaggaaaatcggtgaaagtcagtgataaa
gcacttcagcatgctaagaaactacttgaagatacactagaagatgaatatgtgaaagat
aaagtaactaataaagaagacatagaagcctatcccaacagtgtttctaagaatacagga
gtgaaaacagttcttagacataataagaagtccgtgtctagcaactttgaaagctctgaa
tatattatggggacagatgcaaaatgtgaagactcttcaggagatgccaactattgctgc
cttttcaatggctgcaatagtgtgtcaggtaatcttaacctacagtctcatcagacggaa
gcatcatctccagtgtctgagaatttgtttcatcacaaggcagatcaactagcttgttta
gaaaaggtatcaaaggaatcaacttcaaatgcaaaattagtacaggataccaatattggc
tttaaaactgcaagaggtacaaatattgtggttaatcctgaagctcttaacaaggtgaaa
aggctttgggcagaagaaatgaaactggaagaccaacaggttcagaccttaagtgttatg
gatgatactgaatttggttttaaaggtaaggagactatttttgattcgaatattaagttc
ccaaaaaatctgcaaataggaaatgcaatgccagggtttgctacagctgctggaaaagca
cttacagttagtgagaaggccttgaaaaaagcacagggccttttggaggaaagtagtgaa
gaagccaaactgcactacaataacttgagtggtagtgttgatagtaccagacaggtattg
agagaagaaaaagaaggaagaacaatccagaatcagagaagtaacacacctgcactaaag
gatgaggccagagatataatgaatagagaaaattatcaagaatctaagacaagtagttct
tctgctgtgcttatatcacacaagcaaatggatgaaactaaaaaactaacagaagagtta
gcagatgttgatggtaaatgtagtggtgacaaactatcctgtgcacaagtcaaaggtcct
accaaatccagggattttgagcatctacaacagtttggaggtttttccacagcacgaggt
acaaaggtgaggatcagcaatgcagcccttctgagagcaaggaagctgtgggaggaagat
gacaccacctcaggtgatttgccagatccaaagtttgggaacaccttacaaagtatggta
tcgagtgaagtttctgagactcagaccaaggagagggaaaaatccttgcattcaaataag
gaagccattgctccatcacctaataattttctgggcttttgcacaggtcagggtaagcct
gttgaggttagcaaagagtcattagcaaggaataggaatatttttgaagatattgatatt
cctgaggatgagaaatcacatggtacaagagctgaagttctgcagccagaatgcaagtcc
aaagattttgcagatgttggaggaaggaatttggaagttaatggaggctatgaagtgggg
aacacaaatagtgtcctcgatttggaggagaaattagctggtgaggaaaaagcctataac
ttaaatcaaaactttaattctcatcgtggctttgttactggcagagggaaatgtgtagaa
gttaaaaaagaaactttggaaagggtgagcaaaatgtttatggatgaaaatgatattata
gaatgtgaaaagaatttggaatataatgaaaataaccttagaaacttgggaatattaaat
atggatggagaaaatgcatcaaagaaggaaaagcttagagaacatgaagatgaacacata
gaagaaacaatagattttccagttaaagagcaacactgtgcaggctcacaaaagaccaca
acaagattggcagcactggatagaggggtgcctattaaatgtgggaaacggaaattttct
gaattggggctggctgaactggacccagataaacagattgcgagaccttcaaacaagagg
ctgtcccttggaaattcaagaaacaccaatggaatcccaaggaagagcatctcgaagcta
ggaaggagaggtcactcacagtcagccaaaacctcccatgaaatgcacctcagtccagct
gcaaagtctcagtcacagcccactctcctggcacccagtccccatccccttccaccagag
agtcacacaaaagcacaagacagtctgcagacactggggaaaatcacagctttaacagac
acccaggagatatgtgctatcacagaagctttcttggaggatgatttgagggaagggaaa
gattcattggagagttttaataggaagaggtcgagagaagcttcagggtatgatgggcct
tctggcaagaaattcagagtacctcaaatgccttgcagtcaaatggaggatgcagaaaca
tatgctgctgatgaggtagtagagtcaggcagggagatggcacggctgaagcagagaaag
gtggctcagtataaagagaagcgccctgtgactcccatccagggtgtccttcacaggttt
cggagtgacaagaagcattctaggatcaagatgcagtccttaggctctttaaaggtcaac
agaaatgtttcatgtgaggtagccagcataaatgccagtaatgcaaggatgtttcgattt
cctgtaaaggaccgaagatgtgaaactgtgacctgtgaagatggctgcaccttggttcca
agctcagacggatttataggagttaaggaaattgagcaaggatttttggcagctccaggt
gttcacccaggcctcgtgccaccctcctgggtcattaaccattaccgctggattgtgtgg
aagctggcagcgctggagagaaggctaccccatagtaccttgacaccagaaaatgttatg
gcaagactcaagtacaggtacgaccgtgagattgaccgtgctgagcgccctatcctaaga
aagataatggaacatgacgatgtccctcagaagaccatgatcctttgtgtagcacatgtt
aagaagactcccgagaccactcatgaaggagatggcgtgacagagacaagacctcgcagt
ccatatgctgcttcagaaactattctggaactcacggatggatggtacagcattgatgca
ctgactgacacagcattatcaagatttgttttggaggagaaagtgaagatagggaccaag
ctgttaatccatggagcagagatggccaagcactctccaccttgtcacccactgcaggct
tcttcctctgtttgcctgcgcctgcacaccaacatgacacgaagagctaagtggtggtca
cgcttgggcctggcaccccagtgtgggcctctgcctacattgatccggggaattcaggga
gatggaggtcttgtgggtcgactcactgtcctgttggccagggtgtatccccctctatac
ttcgagaagacaggagggaagtctgtattccggtctgaaagggcccataatagacttttg
agggagaatcagcgggaaaaggagcgaaatgtgcatcagatactggctgaggtcgagaga
gagtttgattcgcgggctgtatcccagaggcaaagtcgaaagaccagcagttccgtgttg
aggggtgaggagatacgcaatttgacctcaggcaaggatattgcccaagtcatggaggag
gcaatggatccatccagcttggagggcctactcagtacacaccagattgagcttgcaaga
tcatggaggcaaagggaagctgaggagagaaagagactgattaatttggaagttcagcaa
aggttggccaagaagcagaagctgtatgaagccgttaccattttgaagatacgcatagtg
gacactgaaggaggaagtgcattggtgactatctggagaccaacagaggaaatcatacaa
gctctgacagaaggaactgtgttttcagtgcattacctttgtgcaaatggtcataagtac
ggagacttgcagttgactgccaccaggcaaactaggtgggagaggttgacaagtcccagc
ctttcccattttcaagatgtgtcacgagaagtcacacctctgtgtttgacctcctcggga
gagctggctcctctttggcgggaggtggatgtggtgggaattgtgcttagagttggcggg
cttgaggcaggctgccagctggttcatctggtggatcaccaggtcaatattctggctctg
aagttctggggaggaatcaaggaatgtggaatggaagacaaggttcaagtgggtgtcttg
ctgtgcgtgtccaatggcagctggagagggcatacgggggggagatttggatgtgtacac
ataacagagctgacggctgtcacaactcagccccgcaggcctcatcttgaagagcaagct
tcccatctaaagaggagtgttgaaaatatgaagactcttctgtgcgacggagatatgaag
ttggatggccaatttaatgaaagagtctcacctgagggagggacttccccatcccaagag
cagagcagggtaggccaggagaatggtcaaggatcaactgttcacgagaatgcacaggga
gattacgaaaaagagcacaaagatggcactccaagcacaggtctcggcagactgcagcaa
cgttccagggaaatacgcagcaagtttaaggcactgggaagctacggaacaccatcagcg
ctgcggtcactgaaatctccagcctccagaggcacacacaagccttttcgaatgccattc
cgtcagcctcttgattcggctaaaaaccaatag
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integrated database retrieval system
