Penaeus chinensis (fleshy prawn): 125035790
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Entry
125035790 CDS
T08118
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03440
Homologous recombination
pchn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125035790
03460 Fanconi anemia pathway
125035790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125035790
03036 Chromosome and associated proteins [BR:
pchn03036
]
125035790
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125035790
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125035790
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125035790
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
125035790
FA (Fanconi anemia) pathway
Downstream FA components
125035790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
BRCA-2_OB3
BRCA2DBD_OB2
RMI1_N_C
Motif
Other DBs
NCBI-GeneID:
125035790
NCBI-ProteinID:
XP_047483960
LinkDB
All DBs
Position
20:3452414..3473202
Genome browser
AA seq
1690 aa
AA seq
DB search
MEHSGGTVTFKAEKFELPLSQSLKSEASEAMDDSFNDIDFAEIDWNFCVPNAKTETDHRS
GKDLADDRSLKGDSEDAGKGTKGFCGFSTGLGKSVKVSDKALQHAKKLLEDTLEDEYVKD
KVTNKEDIEAYPNSVSKNTGVKTVLRHNKKSVSSNFESSEYIMGTDAKCEDSSGDANYCC
LFNGCNSVSGNLNLQSHQTEASSPVSENLFHHKADQLACLEKVSKESTSNAKLVQDTNIG
FKTARGTNIVVNPEALNKVKRLWAEEMKLEDQQVQTLSVMDDTEFGFKGKETIFDSNIKF
PKNLQIGNAMPGFATAAGKALTVSEKALKKAQGLLEESSEEAKLHYNNLSGSVDSTRQVL
REEKEGRTIQNQRSNTPALKDEARDIMNRENYQESKTSSSSAVLISHKQMDETKKLTEEL
ADVDGKCSGDKLSCAQVKGPTKSRDFEHLQQFGGFSTARGTKVRISNAALLRARKLWEED
DTTSGDLPDPKFGNTLQSMVSSEVSETQTKEREKSLHSNKEAIAPSPNNFLGFCTGQGKP
VEVSKESLARNRNIFEDIDIPEDEKSHGTRAEVLQPECKSKDFADVGGRNLEVNGGYEVG
NTNSVLDLEEKLAGEEKAYNLNQNFNSHRGFVTGRGKCVEVKKETLERVSKMFMDENDII
ECEKNLEYNENNLRNLGILNMDGENASKKEKLREHEDEHIEETIDFPVKEQHCAGSQKTT
TRLAALDRGVPIKCGKRKFSELGLAELDPDKQIARPSNKRLSLGNSRNTNGIPRKSISKL
GRRGHSQSAKTSHEMHLSPAAKSQSQPTLLAPSPHPLPPESHTKAQDSLQTLGKITALTD
TQEICAITEAFLEDDLREGKDSLESFNRKRSREASGYDGPSGKKFRVPQMPCSQMEDAET
YAADEVVESGREMARLKQRKVAQYKEKRPVTPIQGVLHRFRSDKKHSRIKMQSLGSLKVN
RNVSCEVASINASNARMFRFPVKDRRCETVTCEDGCTLVPSSDGFIGVKEIEQGFLAAPG
VHPGLVPPSWVINHYRWIVWKLAALERRLPHSTLTPENVMARLKYRYDREIDRAERPILR
KIMEHDDVPQKTMILCVAHVKKTPETTHEGDGVTETRPRSPYAASETILELTDGWYSIDA
LTDTALSRFVLEEKVKIGTKLLIHGAEMAKHSPPCHPLQASSSVCLRLHTNMTRRAKWWS
RLGLAPQCGPLPTLIRGIQGDGGLVGRLTVLLARVYPPLYFEKTGGKSVFRSERAHNRLL
RENQREKERNVHQILAEVEREFDSRAVSQRQSRKTSSSVLRGEEIRNLTSGKDIAQVMEE
AMDPSSLEGLLSTHQIELARSWRQREAEERKRLINLEVQQRLAKKQKLYEAVTILKIRIV
DTEGGSALVTIWRPTEEIIQALTEGTVFSVHYLCANGHKYGDLQLTATRQTRWERLTSPS
LSHFQDVSREVTPLCLTSSGELAPLWREVDVVGIVLRVGGLEAGCQLVHLVDHQVNILAL
KFWGGIKECGMEDKVQVGVLLCVSNGSWRGHTGGRFGCVHITELTAVTTQPRRPHLEEQA
SHLKRSVENMKTLLCDGDMKLDGQFNERVSPEGGTSPSQEQSRVGQENGQGSTVHENAQG
DYEKEHKDGTPSTGLGRLQQRSREIRSKFKALGSYGTPSALRSLKSPASRGTHKPFRMPF
RQPLDSAKNQ
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggagcattcaggaggtacagtcacttttaaagcagagaagtttgagctgcccttaagt
cagagtctaaaatcggaagcaagtgaagccatggatgatagttttaacgatattgatttt
gcagaaatagactggaatttttgtgttcctaatgcaaaaacagaaactgatcataggtca
ggaaaagatttggctgatgatcgctccctgaaaggggatagtgaagatgctggtaaagga
accaaaggcttttgtggattttcaactggcctaggaaaatcggtgaaagtcagtgataaa
gcacttcagcatgctaagaaactacttgaagatacactagaagatgaatatgtgaaagat
aaagtaactaataaagaagacatagaagcctatcccaacagtgtttctaagaatacagga
gtgaaaacagttcttagacataataagaagtccgtgtctagcaactttgaaagctctgaa
tatattatggggacagatgcaaaatgtgaagactcttcaggagatgccaactattgctgc
cttttcaatggctgcaatagtgtgtcaggtaatcttaacctacagtctcatcagacggaa
gcatcatctccagtgtctgagaatttgtttcatcacaaggcagatcaactagcttgttta
gaaaaggtatcaaaggaatcaacttcaaatgcaaaattagtacaggataccaatattggc
tttaaaactgcaagaggtacaaatattgtggttaatcctgaagctcttaacaaggtgaaa
aggctttgggcagaagaaatgaaactggaagaccaacaggttcagaccttaagtgttatg
gatgatactgaatttggttttaaaggtaaggagactatttttgattcgaatattaagttc
ccaaaaaatctgcaaataggaaatgcaatgccagggtttgctacagctgctggaaaagca
cttacagttagtgagaaggccttgaaaaaagcacagggccttttggaggaaagtagtgaa
gaagccaaactgcactacaataacttgagtggtagtgttgatagtaccagacaggtattg
agagaagaaaaagaaggaagaacaatccagaatcagagaagtaacacacctgcactaaag
gatgaggccagagatataatgaatagagaaaattatcaagaatctaagacaagtagttct
tctgctgtgcttatatcacacaagcaaatggatgaaactaaaaaactaacagaagagtta
gcagatgttgatggtaaatgtagtggtgacaaactatcctgtgcacaagtcaaaggtcct
accaaatccagggattttgagcatctacaacagtttggaggtttttccacagcacgaggt
acaaaggtgaggatcagcaatgcagcccttctgagagcaaggaagctgtgggaggaagat
gacaccacctcaggtgatttgccagatccaaagtttgggaacaccttacaaagtatggta
tcgagtgaagtttctgagactcagaccaaggagagggaaaaatccttgcattcaaataag
gaagccattgctccatcacctaataattttctgggcttttgcacaggtcagggtaagcct
gttgaggttagcaaagagtcattagcaaggaataggaatatttttgaagatattgatatt
cctgaggatgagaaatcacatggtacaagagctgaagttctgcagccagaatgcaagtcc
aaagattttgcagatgttggaggaaggaatttggaagttaatggaggctatgaagtgggg
aacacaaatagtgtcctcgatttggaggagaaattagctggtgaggaaaaagcctataac
ttaaatcaaaactttaattctcatcgtggctttgttactggcagagggaaatgtgtagaa
gttaaaaaagaaactttggaaagggtgagcaaaatgtttatggatgaaaatgatattata
gaatgtgaaaagaatttggaatataatgaaaataaccttagaaacttgggaatattaaat
atggatggagaaaatgcatcaaagaaggaaaagcttagagaacatgaagatgaacacata
gaagaaacaatagattttccagttaaagagcaacactgtgcaggctcacaaaagaccaca
acaagattggcagcactggatagaggggtgcctattaaatgtgggaaacggaaattttct
gaattggggctggctgaactggacccagataaacagattgcgagaccttcaaacaagagg
ctgtcccttggaaattcaagaaacaccaatggaatcccaaggaagagcatctcgaagcta
ggaaggagaggtcactcacagtcagccaaaacctcccatgaaatgcacctcagtccagct
gcaaagtctcagtcacagcccactctcctggcacccagtccccatccccttccaccagag
agtcacacaaaagcacaagacagtctgcagacactggggaaaatcacagctttaacagac
acccaggagatatgtgctatcacagaagctttcttggaggatgatttgagggaagggaaa
gattcattggagagttttaataggaagaggtcgagagaagcttcagggtatgatgggcct
tctggcaagaaattcagagtacctcaaatgccttgcagtcaaatggaggatgcagaaaca
tatgctgctgatgaggtagtagagtcaggcagggagatggcacggctgaagcagagaaag
gtggctcagtataaagagaagcgccctgtgactcccatccagggtgtccttcacaggttt
cggagtgacaagaagcattctaggatcaagatgcagtccttaggctctttaaaggtcaac
agaaatgtttcatgtgaggtagccagcataaatgccagtaatgcaaggatgtttcgattt
cctgtaaaggaccgaagatgtgaaactgtgacctgtgaagatggctgcaccttggttcca
agctcagacggatttataggagttaaggaaattgagcaaggatttttggcagctccaggt
gttcacccaggcctcgtgccaccctcctgggtcattaaccattaccgctggattgtgtgg
aagctggcagcgctggagagaaggctaccccatagtaccttgacaccagaaaatgttatg
gcaagactcaagtacaggtacgaccgtgagattgaccgtgctgagcgccctatcctaaga
aagataatggaacatgacgatgtccctcagaagaccatgatcctttgtgtagcacatgtt
aagaagactcccgagaccactcatgaaggagatggcgtgacagagacaagacctcgcagt
ccatatgctgcttcagaaactattctggaactcacggatggatggtacagcattgatgca
ctgactgacacagcattatcaagatttgttttggaggagaaagtgaagatagggaccaag
ctgttaatccatggagcagagatggccaagcactctccaccttgtcacccactgcaggct
tcttcctctgtttgcctgcgcctgcacaccaacatgacacgaagagctaagtggtggtca
cgcttgggcctggcaccccagtgtgggcctctgcctacattgatccggggaattcaggga
gatggaggtcttgtgggtcgactcactgtcctgttggccagggtgtatccccctctatac
ttcgagaagacaggagggaagtctgtattccggtctgaaagggcccataatagacttttg
agggagaatcagcgggaaaaggagcgaaatgtgcatcagatactggctgaggtcgagaga
gagtttgattcgcgggctgtatcccagaggcaaagtcgaaagaccagcagttccgtgttg
aggggtgaggagatacgcaatttgacctcaggcaaggatattgcccaagtcatggaggag
gcaatggatccatccagcttggagggcctactcagtacacaccagattgagcttgcaaga
tcatggaggcaaagggaagctgaggagagaaagagactgattaatttggaagttcagcaa
aggttggccaagaagcagaagctgtatgaagccgttaccattttgaagatacgcatagtg
gacactgaaggaggaagtgcattggtgactatctggagaccaacagaggaaatcatacaa
gctctgacagaaggaactgtgttttcagtgcattacctttgtgcaaatggtcataagtac
ggagacttgcagttgactgccaccaggcaaactaggtgggagaggttgacaagtcccagc
ctttcccattttcaagatgtgtcacgagaagtcacacctctgtgtttgacctcctcggga
gagctggctcctctttggcgggaggtggatgtggtgggaattgtgcttagagttggcggg
cttgaggcaggctgccagctggttcatctggtggatcaccaggtcaatattctggctctg
aagttctggggaggaatcaaggaatgtggaatggaagacaaggttcaagtgggtgtcttg
ctgtgcgtgtccaatggcagctggagagggcatacgggggggagatttggatgtgtacac
ataacagagctgacggctgtcacaactcagccccgcaggcctcatcttgaagagcaagct
tcccatctaaagaggagtgttgaaaatatgaagactcttctgtgcgacggagatatgaag
ttggatggccaatttaatgaaagagtctcacctgagggagggacttccccatcccaagag
cagagcagggtaggccaggagaatggtcaaggatcaactgttcacgagaatgcacaggga
gattacgaaaaagagcacaaagatggcactccaagcacaggtctcggcagactgcagcaa
cgttccagggaaatacgcagcaagtttaaggcactgggaagctacggaacaccatcagcg
ctgcggtcactgaaatctccagcctccagaggcacacacaagccttttcgaatgccattc
cgtcagcctcttgattcggctaaaaaccaatag
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integrated database retrieval system
