Penaeus chinensis (fleshy prawn): 125035838
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Entry
125035838 CDS
T08118
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
pchn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125035838
03015 mRNA surveillance pathway
125035838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125035838
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125035838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
125035838
NCBI-ProteinID:
XP_047484059
LinkDB
All DBs
Position
20:complement(12865175..12884435)
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AA seq
835 aa
AA seq
DB search
MADRRRRRKLASNDDSEDGSEESEDEQSGIRKSLTGSDGGDSEYESADEEELGDEEEEDD
DELILMPDGLGVPGEDNKPLDDDEDRKNPQYIPKKGTFYEHDDRTAEDDAEKPVPEEPVV
KKEIGKKKVWKEDDRWNHDKFNEFDQAPKSREELIAIYGYDIRNEEGPPRARRRRRYGRG
PNKYTRNWEDLDAYAKPTRGGTVRGGIGRGGNRSWTGSRKTLENDEEFPALNSSLQNSKQ
LMDDPQAEQNIPNSESPRTDQQRPIHDDQILGNTDGHKQLQPHQSPQQQHHQKNSIASPQ
VQDVRMENPGRGRGGRGRGRGAGRGNNRHNDERSHNYQENRPAGRGGRGGHQQRPPQQHP
SHGPREMEEITVDMKNISVSAQNREEQFRGKNRGGGNSDNRRNMVPPRLQESAAAAANAQ
GRGNRGGNASPGGDGSASRPKRYSSQRQRSIPDQPVPPFQQQPNYIDPAMEPGYQGGVYE
GGSGNPSTSHSVTSPHSQMPLGGAPPSFVPPAFTSPPTFPPEPFLGRPPAPRPFPPVTQS
PHLYGPPVAPPVAGPPVGAPPPLGAPPVGAPPVPGPPVTGPPFLPPENMINYGAHPGPHP
GPLPGAAPLAGPHPPQFPPFQGFTPGTVAQPGEIYSNGVTYYNTQSQQHLPRINLPLQKR
PKAAIPIVPPPERESRKEGGAAQDSAAGTRQDEQGPEHSEQELNPEVSNQEGENPKESYQ
EPEKVQEEAASVEKMEPIVSSSEASKDQEMDTKEEISSKTVDNHLKESEPEVATTIQESS
EAKPSVDTPETATVPEKEVQAPVVESKPAEQKASSEELQSPPAVSETPDTAVAAS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaggaggcgacggagaaagctagcgagcaatgacgattccgaggatggttcc
gaggagtctgaggatgaacagagcggcattaggaaatctttgacaggaagtgatggtgga
gatagtgaatatgagagtgcagatgaggaggaactgggagatgaggaagaggaagatgac
gacgaactcatcctcatgcctgatggattaggggtgccgggagaggacaacaaaccactt
gatgatgatgaagatcgtaaaaatccccagtacatcccaaagaagggaacattctatgag
cacgatgaccgaacagcagaagatgatgcagaaaaacctgtcccagaagaaccggttgtc
aagaaggaaatcggcaagaagaaggtgtggaaggaagacgacagatggaatcatgacaag
tttaatgaatttgatcaagctccaaaatccagggaggaacttatagctatatatgggtat
gacattcgcaatgaagagggccccccacgtgctcgtcgcaggaggagatacggacgtggc
cctaataaatatactcgcaactgggaggatcttgatgcatatgcaaagcccacacgagga
ggcactgttcgaggaggtattggaagaggaggaaacaggtcttggacgggaagtaggaag
actttagagaatgatgaagaatttccagctttgaactcctccttacagaactctaaacag
ttaatggatgatccccaagctgaacaaaatattcccaattcagagtccccaagaactgac
cagcaaagaccaattcatgatgaccaaatattaggcaacactgatggccataaacagctg
cagcctcaccagtctcctcaacagcagcatcatcagaagaattcaattgcaagtccacaa
gtccaggatgttaggatggaaaacccaggaaggggcagaggtggcagagggcgaggacgt
ggggcaggaagaggcaataataggcataacgatgagcgaagtcacaattatcaagaaaac
agacctgctggtcgtggaggcaggggtggacaccagcagagaccaccgcagcagcaccca
tctcatggcccaagagaaatggaggaaataacagtggatatgaagaatattagtgttagt
gcacaaaatcgtgaagaacaattcagaggcaaaaacagaggaggaggaaattcggataat
agacgcaacatggtaccaccacgccttcaggaatctgcagcagcagctgcaaatgcgcaa
ggcagagggaacaggggtggcaatgcatctcccggaggtgatgggtcagcctctagaccg
aagcgatactcatctcagagacagcgttccatcccagaccagcctgtgcctcccttccag
cagcagcccaactacattgatcctgcaatggaacctggctatcagggtggagtgtatgag
ggaggaagtggaaacccgtcaaccagccactcagttacatcacctcactcccaaatgccc
ttaggtggtgctcctccctcctttgttcctccagcctttacatccccacccaccttccct
ccagagcctttcctggggagaccaccggcacctcgtccgttcccgccggtcacacaatca
ccgcacctctatggccctccagtcgcaccgcccgtcgctggacctcctgtgggcgcgccg
ccacccctcggtgctcctccggtgggtgcacctccagtgccaggccctcctgtcactggc
ccgccattcttaccccctgagaacatgattaactatggagcacaccctggcccccaccct
ggccctctcccaggagctgctccgttagctggcccccacccacctcagttcccgccattc
cagggcttcaccccaggcacagtggcccagccaggtgaaatctacagtaatggtgtcacc
tactacaacacccagagtcagcaacatcttcctaggatcaacttgcctctgcagaagaga
ccgaaggctgctatcccaattgttccacccccggagagggaaagcagaaaggaaggaggt
gcagctcaagattctgcagcaggaactagacaagatgagcagggcccagaacattcagaa
caagagttgaaccctgaggtgtcaaaccaggaaggggagaaccccaaggagagttatcaa
gagcctgagaaggttcaagaggaggcagcaagtgtagagaaaatggagcccattgtttcc
tcatctgaggcttctaaagaccaggaaatggacaccaaagaagagataagttcaaaaact
gtagataatcatcttaaagaaagtgaaccagaggtagccactacaatacaagaatcttct
gaagcaaagccatctgtagatactccggaaactgcaactgttcctgagaaggaagtacag
gcaccagtcgttgaatcgaaaccagcagaacagaaggcatccagtgaagaattacaatca
ccgccagcagtatcagaaacaccagatacagcagtagcagcttcttaa
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