KEGG   Penaeus chinensis (fleshy prawn): 125035838
Entry
125035838         CDS       T08118                                 
Name
(RefSeq) protein CASC3-like isoform X1
  KO
K14323  protein CASC3
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03013  Nucleocytoplasmic transport
pchn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125035838
   03015 mRNA surveillance pathway
    125035838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchn03019]
    125035838
Messenger RNA biogenesis [BR:pchn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     125035838
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 125035838
NCBI-ProteinID: XP_047484059
LinkDB
Position
20:complement(12865175..12884435)
AA seq 835 aa
MADRRRRRKLASNDDSEDGSEESEDEQSGIRKSLTGSDGGDSEYESADEEELGDEEEEDD
DELILMPDGLGVPGEDNKPLDDDEDRKNPQYIPKKGTFYEHDDRTAEDDAEKPVPEEPVV
KKEIGKKKVWKEDDRWNHDKFNEFDQAPKSREELIAIYGYDIRNEEGPPRARRRRRYGRG
PNKYTRNWEDLDAYAKPTRGGTVRGGIGRGGNRSWTGSRKTLENDEEFPALNSSLQNSKQ
LMDDPQAEQNIPNSESPRTDQQRPIHDDQILGNTDGHKQLQPHQSPQQQHHQKNSIASPQ
VQDVRMENPGRGRGGRGRGRGAGRGNNRHNDERSHNYQENRPAGRGGRGGHQQRPPQQHP
SHGPREMEEITVDMKNISVSAQNREEQFRGKNRGGGNSDNRRNMVPPRLQESAAAAANAQ
GRGNRGGNASPGGDGSASRPKRYSSQRQRSIPDQPVPPFQQQPNYIDPAMEPGYQGGVYE
GGSGNPSTSHSVTSPHSQMPLGGAPPSFVPPAFTSPPTFPPEPFLGRPPAPRPFPPVTQS
PHLYGPPVAPPVAGPPVGAPPPLGAPPVGAPPVPGPPVTGPPFLPPENMINYGAHPGPHP
GPLPGAAPLAGPHPPQFPPFQGFTPGTVAQPGEIYSNGVTYYNTQSQQHLPRINLPLQKR
PKAAIPIVPPPERESRKEGGAAQDSAAGTRQDEQGPEHSEQELNPEVSNQEGENPKESYQ
EPEKVQEEAASVEKMEPIVSSSEASKDQEMDTKEEISSKTVDNHLKESEPEVATTIQESS
EAKPSVDTPETATVPEKEVQAPVVESKPAEQKASSEELQSPPAVSETPDTAVAAS
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggccgacaggaggcgacggagaaagctagcgagcaatgacgattccgaggatggttcc
gaggagtctgaggatgaacagagcggcattaggaaatctttgacaggaagtgatggtgga
gatagtgaatatgagagtgcagatgaggaggaactgggagatgaggaagaggaagatgac
gacgaactcatcctcatgcctgatggattaggggtgccgggagaggacaacaaaccactt
gatgatgatgaagatcgtaaaaatccccagtacatcccaaagaagggaacattctatgag
cacgatgaccgaacagcagaagatgatgcagaaaaacctgtcccagaagaaccggttgtc
aagaaggaaatcggcaagaagaaggtgtggaaggaagacgacagatggaatcatgacaag
tttaatgaatttgatcaagctccaaaatccagggaggaacttatagctatatatgggtat
gacattcgcaatgaagagggccccccacgtgctcgtcgcaggaggagatacggacgtggc
cctaataaatatactcgcaactgggaggatcttgatgcatatgcaaagcccacacgagga
ggcactgttcgaggaggtattggaagaggaggaaacaggtcttggacgggaagtaggaag
actttagagaatgatgaagaatttccagctttgaactcctccttacagaactctaaacag
ttaatggatgatccccaagctgaacaaaatattcccaattcagagtccccaagaactgac
cagcaaagaccaattcatgatgaccaaatattaggcaacactgatggccataaacagctg
cagcctcaccagtctcctcaacagcagcatcatcagaagaattcaattgcaagtccacaa
gtccaggatgttaggatggaaaacccaggaaggggcagaggtggcagagggcgaggacgt
ggggcaggaagaggcaataataggcataacgatgagcgaagtcacaattatcaagaaaac
agacctgctggtcgtggaggcaggggtggacaccagcagagaccaccgcagcagcaccca
tctcatggcccaagagaaatggaggaaataacagtggatatgaagaatattagtgttagt
gcacaaaatcgtgaagaacaattcagaggcaaaaacagaggaggaggaaattcggataat
agacgcaacatggtaccaccacgccttcaggaatctgcagcagcagctgcaaatgcgcaa
ggcagagggaacaggggtggcaatgcatctcccggaggtgatgggtcagcctctagaccg
aagcgatactcatctcagagacagcgttccatcccagaccagcctgtgcctcccttccag
cagcagcccaactacattgatcctgcaatggaacctggctatcagggtggagtgtatgag
ggaggaagtggaaacccgtcaaccagccactcagttacatcacctcactcccaaatgccc
ttaggtggtgctcctccctcctttgttcctccagcctttacatccccacccaccttccct
ccagagcctttcctggggagaccaccggcacctcgtccgttcccgccggtcacacaatca
ccgcacctctatggccctccagtcgcaccgcccgtcgctggacctcctgtgggcgcgccg
ccacccctcggtgctcctccggtgggtgcacctccagtgccaggccctcctgtcactggc
ccgccattcttaccccctgagaacatgattaactatggagcacaccctggcccccaccct
ggccctctcccaggagctgctccgttagctggcccccacccacctcagttcccgccattc
cagggcttcaccccaggcacagtggcccagccaggtgaaatctacagtaatggtgtcacc
tactacaacacccagagtcagcaacatcttcctaggatcaacttgcctctgcagaagaga
ccgaaggctgctatcccaattgttccacccccggagagggaaagcagaaaggaaggaggt
gcagctcaagattctgcagcaggaactagacaagatgagcagggcccagaacattcagaa
caagagttgaaccctgaggtgtcaaaccaggaaggggagaaccccaaggagagttatcaa
gagcctgagaaggttcaagaggaggcagcaagtgtagagaaaatggagcccattgtttcc
tcatctgaggcttctaaagaccaggaaatggacaccaaagaagagataagttcaaaaact
gtagataatcatcttaaagaaagtgaaccagaggtagccactacaatacaagaatcttct
gaagcaaagccatctgtagatactccggaaactgcaactgttcctgagaaggaagtacag
gcaccagtcgttgaatcgaaaccagcagaacagaaggcatccagtgaagaattacaatca
ccgccagcagtatcagaaacaccagatacagcagtagcagcttcttaa

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