Penaeus chinensis (fleshy prawn): 125035853
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Entry
125035853 CDS
T08118
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125035853
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125035853
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
125035853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
125035853
NCBI-ProteinID:
XP_047484112
LinkDB
All DBs
Position
20:9502903..9536246
Genome browser
AA seq
2196 aa
AA seq
DB search
MAPHGGRPVGPPRLTSFLRAYANVSRKGKEDDYDLAQILAIKREQRRQRMKESGVTWPRI
KSQVERLGRENGVNLDCYLREVADVARQVAPELDTRDEAATLLFTVSHDHAVLPVKNKLK
LHQMFGDVKPYLLERAHKAVRKVADLVGEEELKELMHDMQNDQETTTMFGANIKVGKLGP
PPELPPMDKLINLQKVKVESKATLRYDDYKPETVQTQVKKKVIKDTYDKSWVEAEMLKYY
TDTSIVSELSSGTIALLISSKGDDELQNEMFELLGFERFELIQTLLQHRNEIKNPPPDKD
VKIAELLSDLEKRGIPERPIFGQQVTVMNETEKQYLKQARKEEKKLLKTAKQIAEDDSID
DFSPDTLKAKREAALLEASQAYLFKKRDRVNVPEIRFPYVFDCQNKAKQTAGYIAGMKIA
LPEGFTRAYDDVMEEVDIPMSDPAPPEVGANLINVKDLDEIGRIAFKGCKTLNRIQTVVY
PSAYHSNDNLLICAPTGAGKTNIAMLTVVHQIRQHIENDVIQRDKFKIVYIAPMKALAAE
MARNFGKRLEPLGITVKELTGDMHLTKPEIMATNMIITTPEKWDVTTRKPGDTQLSQLVK
LLIIDEVHLLHGDRGPVLETLVARTLRMVESQQSMIRIVGLSATLPNYIDVATFLRVNPY
KGLFFFDGRFRPVPLGLTFIGIKALGRFKQMEDMDRITFDKCLHFIKQGHQVMVFVHARN
GTLRTAENLIKIAQEMGKTEDFLPDDGPDVANARKDMARSRNKKLLELFDSGFGVHHAGL
LRADRSAVENVFSQGMIKVLVCTATLAWGVNLPAHAVIIKGTDIYDSKHGTMVDLGILDV
LQIFGRAGRPQFDKNGHGTIITTHDKLAHYLSLLTNQYPIESSFIKHLADNLNAEVSLGN
VTNMEEAIEWMSYTYLHVRMRKNPQVYGLLYKDAQQDPNLEMFRRELLTTAARALDKARM
VRFDDATGFMHITDLGRIASQFYIKYDTVEIFNEFLKSVMNEGDILAVISQSSEFAQLKV
RDEEMNELDDLHQQCEVVAMGGAEHIHGKVNILLQSHISRIRVDSFSLVSDINYITDNSV
RITRALFEIVLHRNWPLMAGRLLTMAKMLEHQMWHFESPMKQFARLTHEIIEKIEDKRLT
IEKIRDMDPKEIGKMIRHERMGREIKAAAWQFPLLAIESKIQPITRTVLRVTLNINADFT
WNDRIHGSQELYWIWVEDPDNNHMYHHEQFTLTKKQVVRREEQQLVFTIPIFEPLPNQYY
VRAISDKWLSCESTCVMNFQNLILPERHPPHTDLLDLEPLPVTALDNMGFEMLYKFSHFN
PIQTQLFHCLYHTDNNVLLGAPTGSGKTIAAEIAMFRTFREAPEAKIVYIAPLKALVRER
VDDWRVRLQERLGKRVVELTGDVSPDIRAIQAAHVIITTPEKWDGISRSWQTRNYVKQVA
LIIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKKLRVIGLSTALANAKDLADWLGISQM
GLYNFRPSVRPVPLEVHIAGFPGKHYCPRMATMNKPTFQAIKQHSPDKPVLVFVSSRRQT
RLTAIDLMGFVVVEPNPKQWLKMPDHEMDQILMNIRDENLRLCLSFGIGLHHAGLIERDR
KVVEELFVNQKIQILIATSTLAWGVNFPAHLVVVKGTEYYDGKTKRYVDFPITDVLQMMG
RAGRPQFDTQGVAVILVHDQKKHFYKKFLYEPFPVESSLMGVLPDHMNAEIVAGTISTKQ
EALDYLTWTYFFRRLVQNPSYYGLELDDEERANNAINTFLSQTVDRALTCLENAYCIEIG
EDNRTIRTTPLGRIASFYYLSHETIQLFHDKLSSSTSMEELLDLMTQAHEYNELPVRHNE
DNLNAGLAKSCPIKVNEYTYDSPHTKTHLLLQAHMSRLKLPCVDYLTDTKSVLDQAIRIL
QAMLDVCGCAGWLAASLQVQVLMQMVTQARWHMDSSLLTLPNVTSDSLYCFKHDGRNIQS
LPELVQVVSGRYETLATMLREELDEGQIESVFKVLKQLPLLNVNVAVRGWWANTENQSEA
RVNIRSTEENRKNSDWVEVHADQEYSLTIHLHRVNRGQDLRIHAPKFPKPKDEGWFLVLG
EVESGELLALKRVPPVRGRATHTLSFKTPDQPGRAVLTLYVMSDSYLGLDQQYDIPLEII
PASLEAQVNSELVISEADEEVLTKWLPPPSDTPTFK
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcatggtggaagacctgttgggccaccaagattaacttcatttcttcgggct
tatgccaatgtcagcaggaaaggaaaagaggatgattatgacctggcccaaatcctggca
atcaaaagggaacagcgaaggcagcgaatgaaagagagtggagtcacatggcctcgcatc
aagagccaggtggagcgtcttgggagagagaatggggttaatttagactgttatttgcga
gaagtggcagatgtggcacgccaggtagccccagagttggacacacgtgacgaggcagcc
accctgctcttcacggtctcccatgatcatgcagtactgcctgtgaaaaacaaactcaag
ctgcaccagatgtttggcgatgtgaagccatatttgttggagagggctcataaggctgtt
cgcaaggttgcagatctcgttggtgaagaagaactcaaggagttgatgcatgatatgcag
aatgatcaagagacaactacaatgtttggagctaatattaaagttggaaaactaggaccg
cctccggaattgccaccaatggataagctgatcaacctacaaaaagtgaaagtagaatct
aaagcaaccttacgatatgatgattacaaacccgagacagttcagacccaagtaaagaag
aaggtgattaaggatacatatgacaagtcatgggtagaagcagagatgttgaaatactac
acagacaccagcatagtctcagagctaagcagtggaaccattgcactcctgattagcagc
aagggtgatgatgaactgcagaatgagatgtttgagttattaggatttgagagatttgaa
cttatccagacgctgctgcaacatcgaaatgagattaaaaacccaccacccgacaaggat
gtaaagattgcagaattgctcagtgacttagagaagagaggaatacccgaaagacctatt
tttggtcagcaagtcactgttatgaatgaaacagagaagcagtacctcaagcaggcaagg
aaggaggaaaagaagttgctaaagactgccaaacagatagcagaggatgactccatagat
gactttagtccagacacactaaaagcaaaaagagaagctgctcttttggaagcttcccag
gcatatctcttcaagaaacgcgacagagtgaatgtcccagagataagatttccctatgtg
tttgattgtcagaacaaagccaagcagacagcaggctacatagcaggtatgaaaatagct
ttgcctgaaggcttcacaagggcttatgatgatgtaatggaagaagtggatattccaatg
tcagatccagctcctccagaagttggagctaatctcataaatgtaaaggatcttgatgag
attggaagaatagcatttaaaggttgcaagacactgaacagaatccagacagtagtttat
ccatctgcttaccatagcaatgacaacttgcttatatgtgctccaactggtgctggtaaa
accaacatagctatgttgactgttgtacaccaaataagacagcatattgaaaatgatgtt
attcagagagataaatttaagattgtttacattgctccaatgaaagccctagcagctgag
atggcacgcaatttcggaaagcgcctggagcctcttgggataactgtgaaagagttgact
ggagacatgcacctcaccaagccggagataatggccaccaatatgattattacaacacca
gagaaatgggatgtgacaacacgaaagccaggagacactcagttatcacagcttgtaaaa
ttactgattattgatgaagttcacctgcttcatggtgatcgaggacctgtgctggagact
ttggttgcgagaacattgcgtatggtggaatctcagcagtcaatgatcaggatagttggt
ctgtctgccacacttccaaattatattgatgtggcaaccttcctcagagttaatccttac
aaagggctattcttctttgatggacgtttccggccagtgcctcttggattgactttcatc
ggtatcaaagctcttggaaggttcaagcagatggaagatatggacaggattacctttgat
aaatgccttcacttcataaagcaaggccaccaggtgatggtatttgtccatgcaaggaat
ggaactttgcgaactgctgaaaatcttatcaagatagcacaagagatggggaaaacagaa
gacttcctgcctgatgatggacctgacgttgccaatgcccgaaaagacatggcacgatca
cggaacaaaaagctgttggagttgtttgattcgggttttggtgtgcatcatgctgggctg
ctgcgagctgataggtcagcagttgagaatgtttttagccagggaatgatcaaagtgttg
gtatgtacagctacccttgcctggggtgttaaccttcccgctcatgcagtcatcattaag
ggaacagacatttatgatagcaaacatggcaccatggttgacttagggatactagatgtg
ctgcagatttttggacgtgccgggagaccgcagttcgataagaatggtcacggaaccatc
atcaccacgcatgataaactggcacattatctgtctttgttaactaatcagtatcctata
gagagttcattcatcaagcatttggcagataatttgaatgcagaggtgtcacttggtaac
gtcaccaatatggaagaagctatcgaatggatgagttatacgtaccttcatgtccgcatg
agaaagaaccctcaggtgtatggattactgtataaggatgcccagcaggaccctaatctt
gaaatgtttcgacgtgagcttctcaccacggctgcgagggcactggataaggctcgtatg
gttcgatttgatgacgccactggctttatgcatattacagatctagggagaattgccagc
cagttctacattaagtatgacacagttgaaattttcaatgagtttttgaaatctgttatg
aatgaaggagacattttagctgttatatcacaaagctcagagtttgcacaactaaaggta
cgagacgaggagatgaatgaactggatgacctccaccaacagtgcgaggtggttgcaatg
ggaggtgctgaacatatacatggcaaagtcaacatccttttgcaatcacacatctcacgc
atcagagtagatagtttctcactggtgtcagatatcaattatattactgataactctgtg
aggataacaagggcactctttgagatagttctgcacaggaattggcctctgatggcaggt
cgtctgcttactatggccaagatgttagaacaccagatgtggcactttgagagccctatg
aagcagtttgcccgcttgacccatgagatcattgagaagattgaggacaagaggctcacc
attgagaagatcagagatatggatcctaaagaaattggcaagatgatccggcacgaaagg
atgggaagggaaattaaagctgcagcctggcaatttccgctacttgcgatcgagtccaaa
atccaacccatcacaagaactgttcttagggttacgctaaacatcaatgcagatttcact
tggaatgacagaattcatgggagtcaggaattgtattggatatgggtagaagatcctgac
aacaatcacatgtaccaccatgagcagttcacactcaccaaaaagcaagttgtacgtaga
gaggagcagcagttggtcttcactataccaatctttgagccactgcctaaccagtactat
gtaagagccatcagtgacaagtggctcagctgcgagtctacgtgtgtgatgaatttccag
aatctaattctcccagagagacatcctcctcacactgatttacttgatttagaaccactg
ccagtgactgcccttgacaacatggggtttgaaatgttgtacaagttcagccatttcaac
cccatacagacccagctcttccactgcttatatcacacagataataatgtattacttgga
gctcccactggttctggcaagacaattgctgcagagatagccatgttcagaacattcagg
gaagctccagaggcaaagattgtctacattgccccactgaaagctcttgtgcgagaacgt
gtagatgactggcgagtaaggctccaggagaggcttgggaagagggttgtcgagctgact
ggtgatgtgtcgccagatattagggccattcaggctgcccatgtgattataactacacct
gaaaaatgggacggtatatctcgctcatggcagactaggaactatgtcaaacaagttgca
ttgattatcatcgatgagattcatttactaggggaggatcgtggtccagtccttgaagtg
attgtgtcgcgcacgaacttcatctccagccatactagtaagaagttgcgtgtcattggc
ctctctactgctctggccaacgctaaagacttggcagattggcttggcattagtcagatg
ggcctgtataatttccgtccatctgtgagacctgtgccgcttgaagttcacatagcaggt
tttcctggcaagcattactgcccacgtatggcaaccatgaataaaccaacattccaagcc
atcaagcagcattcacctgataagccagtgttggtgtttgtctcatctcgtaggcagact
aggctcacagccattgacctcatgggttttgtggtagttgaacccaatcctaaacagtgg
ttgaagatgccagatcatgagatggatcagatattgatgaatattcgtgatgagaatctt
cgcctttgcttgtcatttggaattggtcttcaccatgcgggcctgatagaaagagacaga
aaagttgttgaggagttattcgtcaaccagaaaatccagatcctcattgcaacatccacc
cttgcctggggtgtgaatttcccagcccatcttgttgtggtcaaggggactgaatactat
gatgggaagacaaagagatatgtagacttcccaattacagatgtgttgcaaatgatgggg
cgagcaggaagacctcagtttgatactcagggtgttgctgtcattcttgttcatgaccag
aagaagcatttctataagaagttcctctatgaaccatttcctgtggagtccagtttgatg
ggtgtcctgcctgatcacatgaatgctgagatcgttgctggcaccatttccacaaagcaa
gaagccttggattacttaacttggacatatttctttaggaggcttgtccagaatccatcc
tactatggactagaattggatgatgaggagagagcaaataatgccattaacacctttctc
tctcaaactgtagacagggcattgacttgtctagaaaatgcatactgcattgaaattgga
gaggacaaccgcactatcaggacaacaccacttggccgcatagcttccttctactacttg
tcccatgagacaatccagctcttccatgataagctcagttctagcacctctatggaagag
cttttggatctgatgacacaggcacatgaatataatgagttgccagttcgtcacaacgag
gacaacttgaatgctgggttagcaaaatcctgtcccatcaaagtgaatgaatacacatat
gattctccccatacaaagacccacttgctactacaggctcacatgtctagactgaagcta
ccttgtgtagattatctcactgacacaaaatctgttttggaccaggctataaggatttta
caggctatgttggatgtctgtgggtgtgcaggctggttggctgcttcactacaagtccaa
gtgttgatgcagatggttactcaagcacgctggcacatggacagctcccttctgacgctg
cccaatgttacttctgactctttgtattgtttcaaacatgatggaagaaatattcagagt
ctgccggagcttgtgcaagttgttagtggacggtacgaaacactggcgacaatgctccga
gaagaactagatgagggacagattgaaagtgtctttaaggtcttaaaacaacttccttta
ctcaatgtcaatgtggctgtgcgaggctggtgggctaacacagaaaatcagtcagaagcc
agagtcaacatcaggagcacagaggagaaccgcaagaacagtgactgggtcgaggttcat
gcagatcaggaatattctctgaccatccatcttcaccgtgtgaacaggggtcaagacctt
cgcatccatgctcccaagttcccaaagccgaaggatgagggctggttcttggtcctaggg
gaggtagagtctggggagttgttggcactcaagagagtgccacctgtccgcggcagagct
actcacaccctctccttcaagacacctgatcaaccaggacgagcagtactgacactttac
gtgatgtcagacagctatctaggcttggaccagcagtatgacatccccctcgaaatcatt
cccgccagtcttgaagctcaagtgaactcagaactagtgataagtgaagcagatgaagaa
gtactcaccaaatggcttcctcccccctcagatactcctacttttaaatag
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integrated database retrieval system
