Penaeus chinensis (fleshy prawn): 125036060
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Entry
125036060 CDS
T08118
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pchn01009
]
125036060
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125036060
Enzymes [BR:
pchn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125036060
Protein phosphatases and associated proteins [BR:
pchn01009
]
HAD phosphatases
Fcp/Scp phosphatases
125036060
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125036060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
PIP49_C
Motif
Other DBs
NCBI-GeneID:
125036060
NCBI-ProteinID:
XP_047484402
LinkDB
All DBs
Position
20:22605408..22629740
Genome browser
AA seq
740 aa
AA seq
DB search
MAENSKKTTGVESKKVQKTSRRLESFIATSELAKAARSRAQIAFYRLIEEGITPRVFREE
LHFINPEIYEDIIADRSTAGLCGYPLCSNFFKDKFGNRTYIIVKNTVYDITVRKNFCSDV
CYEASEIILRQIPTSPLYIRETSVEKKIQFPARAKLSGLHGKIIDITGLGTGYNKVPQKS
HKTSVLVDNIARESLIQCTENSGVEETKSQGKGSNTSKGEPSAVETNLREPRSEAEDDKS
KLSESINNETQAKSDVGVKSSDNTDMENLIQKIENIELEKSTSQENKWKDTDSRNELENK
NELLGCINSEGEQVKSCEDIKSTEDSIKGTVTGNPSHSLYEPLMPVYQIEKAMKEWMSFE
SLRVILGDTYVRGMLEHFGHSWQDYDTTSGLKLGIDARAKYIALCRKLDQQELQEEKEMI
HLDVENDFSKAPTKAMPDYEQLKKDARKQELKVVSFLGGREQYEEAEVEEEEEGRKKGLE
PIPEEQCDANKPAKVANPSGIVAKKGKGKKTKKNVDEFEVETSTLPLIDSYSQMAWRQQI
VLEKTRKCLNEIVAVTALNSGKVGQLLKAIVITLDLDAHNISFRPGQWNLIMLIFMELLS
IRYPVISAAMKTEKYCEFQENIISAFGLDVGYMSRIVTYLTEIQPVISKNYINNIENKEV
KDITRTMSNQDATTNNQKDLSNTVSADERPCTSEKQISNVYELTENIKKVNTQEKSDETE
QSLRQEMDTCMKSTSIEELD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaacagcaagaaaactactggagtggagagcaaaaaagtgcaaaaaacttcc
agaaggctagagtctttcatagcaacaagtgagcttgcaaaggcagctagaagcagagca
caaatagcattttataggctaattgaagagggtattactcctcgtgtctttcgagaagag
cttcacttcataaatccagagatatatgaggacattattgctgaccgaagcactgcagga
ttgtgtgggtatcccctgtgttcaaatttcttcaaggacaagtttggcaacagaacctac
atcatcgtcaagaatactgtctatgacattactgtcagaaagaatttttgtagtgatgtc
tgttatgaggcatcagagatcatcttacggcagatcccgacctcaccactgtatattcga
gaaacaagcgtagaaaaaaaaattcagttcccagctagagccaagttgtctggtttgcat
gggaagattatagatataacaggtttagggactggctataacaaagttccccaaaaatca
cataagacaagtgttcttgttgataatattgccagagagagcctgattcagtgcacagaa
aatagtggagtggaggaaaccaaatcacaagggaaaggcagcaatacatcaaaaggagag
ccatctgcagtagagacaaatttaagagaaccaagaagtgaagctgaggatgataaaagt
aaattgtcagaaagcataaacaatgaaacacaagcgaaatcagatgtgggtgtcaaatct
agtgataatactgatatggagaacttgatccagaaaatagaaaatattgaattagaaaaa
tccacttcccaagagaacaagtggaaggacacagattcaagaaatgaacttgaaaataag
aatgagctgttaggctgcataaactctgagggagagcaagtgaagtcatgtgaggatatc
aaatctactgaggacagtattaagggaactgtgacaggaaatccttcacactccttatat
gaacctttgatgccagtataccaaatagagaaagcaatgaaagaatggatgtcctttgaa
tccttacgtgtcatccttggagacacgtatgttcgaggaatgttggagcattttggacat
tcgtggcaagattacgatacaacatcagggcttaaattaggcattgatgcaagggcaaag
tacatcgctctctgtcgtaagttggaccagcaggaattacaggaggagaaagagatgatt
caccttgatgtagagaatgatttttcaaaagctcccacaaaagccatgcctgactatgag
cagctgaaaaaagatgcaagaaaacaagagctcaaggttgtttcattcctggggggaagg
gaacagtacgaggaagcagaggttgaagaggaagaagaggggagaaaaaaaggcctcgag
cccattccggaagagcagtgtgacgccaataagcctgccaaggttgctaatccaagtgga
atagttgccaaaaaaggaaaggggaaaaagacaaagaagaatgtggatgagttcgaggtg
gagacttcaacacttcccttgatagactcgtattcccagatggcatggcgtcaacagatt
gtgttggagaagaccaggaaatgcttgaatgagatcgtagctgtaactgctcttaatagc
ggaaaggtgggacaactgctgaaggcaattgtgatcacacttgatcttgatgctcataat
atttccttcaggccaggacagtggaatttgattatgctgatattcatggaactgttaagc
atccggtatccagttattagcgcagccatgaagactgaaaagtattgtgagtttcaggaa
aacatcatatcagcttttggtctagacgttggatacatgtcacgtattgtcacgtatctc
actgaaatccagcctgttatcagtaaaaattatataaataacattgagaacaaggaagtt
aaagatataacaagaacaatgtctaatcaggatgcaacaacaaataatcagaaagattta
tcaaatacagtgagtgcagatgaaagaccgtgtacatcagaaaaacagatttctaacgta
tatgaattaactgagaatattaaaaaagttaacacacaagaaaaaagtgatgaaacagag
cagtcactcagacaagaaatggacacttgcatgaaaagtacttcaatcgaggaacttgac
tag
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