Penaeus chinensis (fleshy prawn): 125036328
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Entry
125036328 CDS
T08118
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
pchn03015
mRNA surveillance pathway
pchn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125036328
09122 Translation
03013 Nucleocytoplasmic transport
125036328
03015 mRNA surveillance pathway
125036328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125036328
03041 Spliceosome [BR:
pchn03041
]
125036328
03009 Ribosome biogenesis [BR:
pchn03009
]
125036328
03012 Translation factors [BR:
pchn03012
]
125036328
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125036328
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125036328
mRNA cycle factors
Stress granule specific factors
125036328
Spliceosome [BR:
pchn03041
]
Complex C
Other components
EJC/TREX
125036328
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
90S particles
Helicases
125036328
Translation factors [BR:
pchn03012
]
Eukaryotic type
Initiation factors
eIF-4
125036328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
TniB
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
125036328
NCBI-ProteinID:
XP_047484824
LinkDB
All DBs
Position
21:16541369..16551161
Genome browser
AA seq
402 aa
AA seq
DB search
MAEGRVRRVIPEDLSNVEFETSEEVEVVPTFDNMGLREDLLRGIYAYGFEKPSAIQQRAI
RPIVKGRDVIAQAQSGTGKTATFSISILQTLDINVRETQVLTLSPTRELAVQIQKVVLAL
GDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRTLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggacgcgtgagaagagtgatccccgaagacctctccaatgtcgagtttgag
accagcgaagaggtggaggtcgtcccaaccttcgataacatggggctgagagaggacctc
cttcgtggaatttatgcatatgggtttgaaaagccatctgctatccaacagcgtgctatt
cgccccattgtgaagggtcgtgatgtcattgcacaggcccagtctggaacgggtaaaacc
gccactttttccatctctatcctacaaacacttgacatcaatgtccgtgagacacaggtc
cttacactctcacctacaagggagttggcagtccaaattcaaaaggttgttctagcctta
ggagattacatgaatgttcagtgtcatgcttgcattggaggaaccaacttgggggaggat
atccgcaaacttgactatggccagcatgtcgtatctggcacaccaggtcgagtgtttgac
atgatcagacgccgcactctcagaacccgttcaattaagatgttggtcctagatgaagca
gatgaaatgttgaacaaaggcttcaaggaacagatctacgatgtttaccgttaccttcca
ccagctactcaggtctgcttgatctctgccacacttccccatgaaattcttgagatgact
tcaaagttcatgactgatcccatccgcattcttgtgaaacgtgatgaactgacactggaa
ggaatcaagcagttctttgtggcagtagagcgcgaagagtggaaatttgatactttgtgc
gacttgtatgatacactgaccatcacccaagcagtaatcttttgcaacacaaagcgtaag
gtggactggctgacagaaaagatgcgagaggccaatttcacggtgtcttccatgcacggt
gacatgccacagaaagagcgagatgccatcatgaaggagttccgttcaggccagagtcga
gtactaatcactactgatatttgggcaagaggaattgatgtacagcaggtatccttggtc
attaattatgacctgccaaacaatcgtgagttgtacattcatcgcattggtcgatctggt
cgttttggaaggaaaggtgttgcaatcaactttgtgaagaatgatgatattcgtatcctg
cgagatattgaacagtattactcaacacagattgatgaaatgcccatgaatgttgctgat
ttaatctaa
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