Penaeus chinensis (fleshy prawn): 125036519
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Entry
125036519 CDS
T08118
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pchn03037
]
125036519
Cilium and associated proteins [BR:
pchn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
125036519
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
WDR55
ANAPC4_WD40
TPR_GEMI5
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
TPR_COPA_B
Beta-prop_WDR75_1st
TPR_IFT80_172
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
PPR_2
NBCH_WD40
SNAP
Motif
Other DBs
NCBI-GeneID:
125036519
NCBI-ProteinID:
XP_047485121
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All DBs
Position
21:17968834..17988604
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AA seq
1481 aa
AA seq
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MSLYFDCIVESPVSNAINTQIAWHPQATCLAVASFSEEKGGAVNVYTGEGKLCDEVDIPP
HPTAQVTSVTWHPSKRILAIGWETGELYLWNDHEHEFHEIQSLHRAPISILSFSAAGTRL
VSADASGSLVGWRVDTSGNLQTVFTHELKDPLAQIVFRVTVATQLPSLDINGLARAAVSG
DERALDIFSSWRPRTGHKRLGLGSNAKENLNFFLGSSTGVLYHVSDSGNCVEVLQADGGI
KRLLHHESRNLLVVITEGMVLGQFSVAIDGAVTEINKVKLSGRTNDIQVTWAGTGLLAVS
TGDNNVRLWNLDSGDNYVLSLHGFSYRDQEYMMCLSYSENKKILCGGTNMGSVAMWKYEE
QKLNNNEYTRDPEKDWKLQSPSILSGAVKRVSWGSAQNLLAVDTVRDVYILNEQNMVASY
RDQVCVVQESPTQLSVDVFSADNHLEFRADIQVRGVHNTVDHLLIWNMKKMVIYEITSDA
THLRVVGSFACEAESAVLHEASIYSIEGLNVQVRSMQGTIKQTLSFSESEGEPIGLDVCG
NFLVVATIQGIIKLWDLSRREAKQHTQGKQLSDAIKDFGEVISARCNCSGTRVSIAVAQT
SLLPDPKLYIWDIENDNITYFNFASGRSEDDDNDGTAPPNSAESSSSKYGGGQERAKRET
AREVGGRFVMSHMWDLEDPRLLVCEAKSLHSKKKQRDNYMASDKEERPAIMLVSLFVSPD
HGAIVQDAFPLTPTYSRLLGVQVPFLYLLNDGAVDKKSDTKAKLVTQKVMRDFVGLESCD
KPTKEAMLNFSFYLSMGNMDDAFKAIKTIKSETVWENMARMCVKTKRLDVAALCLGNMGH
ARGARALRQAMKEPQLDARVAMLALQLNMVEEAEQLYRGCGRHDLVNRMYQDGGIWSKAL
ETANENDRIHLRSTHYNYAKHLESKGDFSGAISHYEKSDTHRFEVPRMLFDELPTLEDYI
MHTKDKSLRRWWAQYLESTGEMETALQFYEAARDHLSLVRVYCYCNNLQKAAEIANETGD
RAACYHLARQYENVNMVKEAIHFFTRAQAYGNAIRICKENGYEDQLMNLALVAGPQEQID
AARFFSSSERRQLSKAVMLYHKAGLLSKAVDLAFKSGQVSAVGQIASELDENADPALIQR
CAQYFISNGQYDRAVSLLITGRQYFDALDLCVEHNVWVTEELAEKFTLPKDESARNQILE
KVAECAYAQENYKLATKKFTQAGNKVKAMKCLLKSGDTERIVYFANVCRQREIYIMAANY
LQSLDWRKEPEIMKNIIQFYTRAKATGLLAGFYDACAQVEIDEYQNYEKAAGALSEAYKI
LTNSNDHQSQERLPSVQYKLEKVKQYIGIRRMFPAEGETGIRELQDMLLDPNIEAAVRQG
DIYATIIEYYVSNNNFKSAVSSLQDMKNRLPKANPSYYIDAQALQSIARATGVNVGGLEN
GNEEGGSEDEGNASEEEVVEEDEEDIRPQRHFALNGSAKFL
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtattttgactgcatagtagaaagcccagttagtaatgcaatcaacacccag
atagcatggcatcctcaggcaacctgtctcgctgtagcttcctttagtgaagagaaaggg
ggagcagtcaatgtgtacacaggggagggcaagctatgcgatgaggtggacatcccaccc
catccgacagcccaggtgacatctgtgacctggcatccaagcaagcgcattcttgccatt
ggatgggagacaggagagctctacctctggaatgaccatgagcacgagttccacgaaatt
cagagtctgcaccgtgcacccatatccatcctcagcttcagtgcagcgggaaccagacta
gtgtcagcagatgcatcaggatctttggttggatggagagtggacacatcaggcaatctg
cagacagtatttactcatgagctcaaggacccactggcacagatcgtcttcagggttacc
gtggcaacccaactaccatctctagatatcaatgggcttgcccgggctgctgtaagtgga
gatgagagagcccttgacatcttcagctcctggaggccgaggactggacacaagcgcctt
gggctgggaagcaatgccaaggagaatctcaatttctttctcgggtcatccacaggtgta
ctgtaccatgtcagtgatagtgggaactgtgtggaggttctacaggcagatggtggcatt
aagcgactcctacatcatgaatcgcgtaatttgcttgtggttattactgaaggaatggtt
cttgggcagttttctgtggctattgatggagcagttactgaaatcaacaaggtaaaactg
agtggcaggacaaatgatatccaggtgacatgggctggaacaggactgctggctgtatca
actggcgacaacaatgtgcgtctatggaacctcgactcaggagataattatgtactgagt
ttgcatggtttcagttatcgggatcaagaatacatgatgtgcctcagttattctgaaaac
aaaaaaatattatgtggaggcacaaatatgggaagtgtagccatgtggaagtatgaggaa
caaaagctgaacaataatgagtacactcgagaccctgagaaggactggaaactgcagagc
ccttccatcctatctggagcagtgaaacgggtttcatggggctcggcccagaatttactg
gctgttgatactgtccgagatgtgtacatacttaatgagcagaacatggtagcaagttac
cgagatcaggtgtgtgttgttcaagaatcaccaacccagctgtcagttgatgttttctca
gcagacaaccatctggaatttcgtgcagacatacaagtcagaggtgttcacaacactgtg
gatcacctcttgatatggaatatgaagaaaatggttatatatgaaattacatcagatgcg
acacacctgagagttgtaggttcttttgcatgtgaagcagagagtgccgtgttacatgaa
gccagcatatattccatagagggtttgaatgttcaagtaagatcgatgcagggaacaata
aagcagacactgagtttctcagagagtgaaggggaaccaattggccttgatgtttgtggc
aattttcttgtggtagccacaatccaagggattattaagctatgggacttgtctagaagg
gaggcaaaacaacacacacaaggcaaacagttgagtgatgccatcaaggactttggggaa
gttatctcagcaagatgcaactgtagtggtacaagagtctctattgctgtagctcaaacc
tccttgcttcctgatccaaaattatatatctgggatatagagaatgacaatatcacgtac
ttcaattttgcatctggacgatctgaagatgatgataatgatgggacagcacctccaaac
tctgcagagagttcaagttctaagtatggtggaggtcaagaaagagccaagcgtgagaca
gccagagaagttgggggtcgctttgtgatgtctcacatgtgggacttggaagatcctcgg
ctacttgtgtgtgaagccaagtcccttcatagcaagaaaaagcaaagagataattacatg
gcttcagataaagaagaacggcctgcaatcatgttggtatctctgtttgttagtcctgac
catggggctattgttcaagatgccttccctctcactccaacttactctagacttcttggt
gtgcaagttccattcttatatctgctgaatgatggtgctgttgacaaaaagtctgacaca
aaagccaaattagttacgcaaaaggtaatgcgggactttgtaggcctggagagctgtgat
aagccaacaaaggaagccatgcttaatttctccttctatctctcaatgggaaatatggac
gatgcatttaaagctatcaaaacaatcaaaagtgaaactgtatgggaaaacatggctaga
atgtgtgttaaaacgaagcgcttagatgttgctgctttgtgtcttggaaacatgggtcat
gctcgtggtgctagagctcttaggcaagccatgaaggaacctcagcttgatgcaagagtg
gctatgctggcactacagctgaatatggtggaagaggctgagcagctttatcgtgggtgt
ggccgccatgaccttgtgaatcgcatgtaccaagacggtggcatttggtcaaaggctttg
gagacggccaatgagaatgacaggattcacttgagatcgacgcattataattatgccaag
cacttagagagtaaaggagacttcagtggtgccatcagtcactatgagaaatctgatact
cataggtttgaagtaccaaggatgctgtttgatgaactcccaacacttgaagattatatc
atgcatactaaagacaagtccttgagaaggtggtgggctcagtacctagaatcaacaggt
gaaatggagacagcactgcagttttatgaagctgctcgagatcatctatccttagtccgt
gtgtattgttattgtaacaatctacagaaggcagcagaaattgctaatgagacaggagac
agggctgcatgctatcacctagctcgccagtatgagaacgtcaatatggtgaaagaggcc
attcacttctttactcgagctcaggcttatggcaatgctatcagaatttgcaaggagaat
ggttatgaagatcaacttatgaatctagctcttgtggctggacctcaggaacaaattgat
gcggccagatttttctcctcttcggaacgccgacaactctcaaaggctgtcatgctgtac
cacaaagctggtctcttgtccaaagctgttgatctagcctttaagtctgggcaagtcagt
gcagtgggccagattgcgtctgaactcgatgaaaatgcggatcctgctcttattcagaga
tgtgcccagtacttcatctccaatgggcagtatgatcgtgcagtgtcactcttgattact
ggtagacagtactttgatgctcttgatttatgtgtggagcacaatgtatgggtgacagaa
gaactggctgagaagttcaccctgccgaaagatgaatcggctcgtaatcagatcttagaa
aaggtagcagagtgtgcttatgcccaagagaactataaattggctaccaagaagttcaca
caggctggtaacaaggttaaggcaatgaagtgtcttctgaaatcaggtgatacagagcgc
attgtttactttgccaatgtgtgtcggcaaagggagatctacatcatggcagcaaattac
ctccaaagtttggattggcggaaggagcctgaaattatgaagaacatcattcagttttac
acaagagctaaagctactggcctgttggcaggattttatgatgcttgtgctcaggttgag
atagacgagtatcagaactacgagaaggcagctggagctctcagtgaagcttataagatc
cttaccaattctaatgaccaccaaagccaggaaagacttccatcagtccagtacaagttg
gagaaggtcaagcagtacattggtatcaggagaatgttcccagcagaaggtgagacaggt
attagagaacttcaggacatgctgttggatcctaatattgaggctgcagttcgccaaggg
gatatttatgccaccataattgaatattatgtttccaataacaatttcaagtctgctgtc
agttcattgcaagatatgaagaacaggttgccaaaggccaaccccagttattacattgat
gcccaagctctccagtcaattgccagagcaacaggagtcaatgttggaggattagaaaat
ggaaatgaggaaggaggaagcgaagatgaaggaaatgcaagtgaggaagaagtggtcgag
gaagatgaggaagatattagaccacaacgtcattttgccctgaatgggtctgcaaagttc
ctgtaa
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integrated database retrieval system
