Penaeus chinensis (fleshy prawn): 125036643
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Entry
125036643 CDS
T08118
Name
(RefSeq) zinc finger protein swm-like isoform X1
KO
K13192
RNA-binding protein 26
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pchn01009
]
125036643
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125036643
03041 Spliceosome [BR:
pchn03041
]
125036643
Protein phosphatases and associated proteins [BR:
pchn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125036643
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
125036643
Spliceosome [BR:
pchn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125036643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_1
RRM_Nup35
PWI
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
125036643
NCBI-ProteinID:
XP_047485374
LinkDB
All DBs
Position
21:14574046..14590670
Genome browser
AA seq
1094 aa
AA seq
DB search
MIIDHPELLKQWLTGFLAPLCDADPEALAKYCLALVRKDRPISELKAGMIEQLDVFLQSN
TKSFVDKFLQVTTTRSYIPKSSSSSLSSSTGPFSTDPSSPSLNNNSDSGPPPLPPTPVSK
QSSGHSPDSTTPPNAVPPPATSSSTGMQPAPPPPPPSSAAAPPPPPPPESAPPPPVPASV
ITRKEEVSSSQRSRKSESDRDRDDRRGRRRSPSRGRSRSRSRSRSRSRDRSRRSRSRGRS
GRSKYEDRRRRSPPTKRYRRSRTRSRTRSPRRSRSPRRSRSRERRSRSRNRSRSISPRNN
RTSGRGRSPPPTPRSPTPPRKSKSLPRDEKRESPHGTSPVAEVRPEPRSDPSSVIQSVIA
VKHTDFVAPPPAGKKQRCRDYDEKGYCMRGDMCPFDHGSDPVVLEGIGGVLDFPPPPVPG
AQGYTPAPAPPQGVPRPRHPPPRHPQYGKTIGEYTPRDPSLWGGQVNSSTGPYYGASGGQ
GRGTSGGGPRFSAPPPPLPSGTSRELISVPVNNEASMVSSGGVRPSLAKRLGPAVPPANN
IMPMTSKPGRPDLDNCTLELKKIPPGLNTISHLNDHFAKFGTIVNIQVQNEGNPESALVT
FASHSEANAAYRSTEAVLNNRFIKLFWHNPQNKPDRPGSYPSHTVRPVHDRLGVRHPNKT
LNKMVVEHTSEDKNEKVMISRGSLVKTVYNTHALHSAAAATAVASSTAAGPATGAVTPTS
PVNGPPSLPATAPDSTQTAADSKRQEIDAIFKQRELLAAEVAAKQKVEKQKAEALKLKSE
VEQRKRLLLDKQMQQLKVLVTKFDKNKATMKAEEKKLLLETIKSLQAAIDTTRSQLVAGE
TPKSKVQVDREILDTELELYTVQAEGGDISKLRARLNQLRAQQQAAGYPVSRSARHAPYS
TARGGHYGRGRGVASLARGGLRGRGRGRGYGGHSFSSVDRRTTKINASGFEREDKEEVLA
HFSTLGTVSNYIWDDQTPAVTIHYSSRREAEKAMSEGRTLGDRLLTLTWAFDSPLPVSSQ
AAGGVAGGHHVATHAYSNVAPHSTTPSLSPDDTLEEITEEIVEEVETEEGEHPELFEEEE
EVEEDEEEVRSWRR
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgatcacccagaactattgaagcagtggttaacaggcttcctagcacctctg
tgtgatgctgacccagaagccttagccaaatactgccttgctttagttcgtaaggaccgc
cccatttcagagctgaaggctggcatgattgagcagctcgatgtttttcttcagagcaat
accaagtcattcgttgataagtttttacaagtaactaccacacggtcatacataccaaag
agctccagttcatcactgtcgtcgtctacagggccattttcgactgacccatcctctcct
agtctgaataataatagtgactctggcccaccgccattacccccgaccccagtttcaaag
cagtcatctggccactctcctgattcaaccacccccccaaacgcagttcctccacctgct
acctcctcatctacaggcatgcagcctgccccaccaccaccacccccaagttctgctgct
gcccctcctccaccgccacctcctgagtccgcccctcccccacctgtccctgcatctgtc
atcacccgtaaggaggaagtgtcctcctcacagagatccagaaagtcagaatctgatcga
gatcgtgatgatagacggggaagacgaaggtcaccatcacgaggaagatccaggtctcgt
tcacgttccagatcaaggagtagagacaggtcaaggagatcacgttcaaggggtcgctct
ggacgcagtaaatatgaggacaggagaaggagatcaccaccaaccaaaagatatcgtaga
tcaagaacacgctcccgtacccgaagtccaagacggtcaagaagtcctcggcgctccagg
tcaagggagagaagatcaaggtctagaaacaggtcgcgctccatcagtccgagaaacaac
aggacatcaggccgagggaggtcaccacctccaaccccacggtcaccaacacccccaagg
aaatcaaaatcattgcctagagacgaaaagagagaaagtccacatggaacctcacctgtt
gctgaagtgagaccagagccaaggagtgatccaagttctgttatccaaagtgtcattgct
gttaagcatacagattttgtggcaccaccaccagcgggcaagaaacagaggtgtcgtgat
tacgacgagaaaggttattgtatgcgaggtgacatgtgtcccttcgaccatggctcagac
ccagtggtgcttgagggtatagggggagtgctggactttcctccacctccagtgccaggt
gcccaagggtacaccccagcacctgctccaccacagggagtgccaagacccaggcatcct
cccccaagacatccacagtatggtaagacaattggtgagtataccccccgtgacccaagc
ttgtggggtggtcaggtcaacagcagcacaggaccttactatggagctagtggtggtcag
ggaagagggacaagcggcgggggtcctcgtttctcggcacctccaccacctcttcctagt
ggcacatctagggaactcatcagtgtgccagtcaataatgaggcatccatggtgtcaagt
ggcggagtaagaccatctctagccaagcgcttaggcccagcagttcctccagcaaacaac
attatgcccatgacttcaaagccaggacgtcctgaccttgacaattgtacactggaactg
aaaaaaataccaccaggattgaacaccatttctcatctgaatgaccattttgcaaagttt
gggactattgtcaatattcaggttcaaaatgaaggtaatccagagtcagccctggtgaca
tttgcaagccattcagaagcaaatgcagcataccgcagtacagaggcagtgctcaacaac
aggtttatcaagctattttggcacaacccacagaataaaccagatcgtcctggaagttac
ccgtcccacactgtcagacctgtgcatgacagactgggcgtcagacatcctaacaaaacc
ctcaacaagatggtggtggagcacacaagtgaggacaaaaatgaaaaggtgatgatctct
cgaggcagcttagtcaagactgtttacaacactcatgccctccattctgctgctgctgct
actgctgttgcctcttctactgcagctggccccgcaactggagctgtcactcccacctcc
cctgtcaatggccctccctctttacctgccacagcacctgactcaacacagactgctgcc
gacagtaaaagacaagagattgatgcaatctttaagcagcgagaattattagctgcagag
gtcgcagctaaacagaaggtggaaaagcagaaggcagaagctttaaagctaaagtcagag
gttgagcagaggaagagattgctgttggacaaacagatgcaacaactcaaggtacttgta
acaaaattcgacaaaaacaaagccaccatgaaagcagaagagaagaaattactcctagaa
actatcaaatctttgcaagcagccattgacactacaagatcacagctcgtagctggggag
actcccaaaagcaaagtccaggtagacagagaaatacttgacactgaacttgagctgtac
actgttcaagctgaaggaggagacatttccaagctccgtgcacgactcaaccagctgcga
gcacaacagcaggctgcaggttaccctgtttcaagatctgcaagacatgcgccatatagc
actgcaaggggaggccattatggtcgaggaagaggagtagcaagcttggcccgaggaggt
ttgagaggaaggggcaggggaagagggtatggtgggcactcgttttcatctgttgatcga
agaaccaccaagatcaatgcctctgggtttgaacgtgaagataaggaggaagtgttggcc
cacttttcgaccttgggcactgtctccaattatatatgggatgatcagactccggctgta
acaattcactactcatcacgtcgagaggcagaaaaggcaatgtcagagggtaggactctt
ggtgatcggcttctgaccctcacctgggcctttgattcccccctgcctgtatcctcacag
gctgcgggaggagtggctggagggcatcatgtggccacacatgcatactctaatgttgcc
ccacactccaccactccatctctctccccggatgacacactagaggaaataactgaggaa
atagtggaagaagtggaaactgaagaaggggagcaccctgaactctttgaagaagaggaa
gaagtagaagaggatgaggaagaagtcagatcatggaggaggtag
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