Penaeus chinensis (fleshy prawn): 125036729
Help
Entry
125036729 CDS
T08118
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04120
Ubiquitin mediated proteolysis
pchn04137
Mitophagy - animal
pchn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125036729
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125036729
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125036729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125036729
Enzymes [BR:
pchn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125036729
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125036729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
125036729
NCBI-ProteinID:
XP_047485525
LinkDB
All DBs
Position
21:complement(12952379..12959026)
Genome browser
AA seq
292 aa
AA seq
DB search
MLYDRVSTITDQKITMSAFASKSGRVVPPQSPSQSGVPPGGNTDLASLFECPVCFDYVLP
PILQCQSGHLVCANCRPKLTCCPTCRGPLGNIRNLAMEKVASTVMFPCKYSSSGCSATLL
HTDKTEHEDTCEFRPYMCPCPGASCKWQGSLEQVMPHLMSVHKSITTLQGEDIVFLATDI
NLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKQAENFAYRLELNGL
RRRLTWEATPRSIHEGVQSAIMNSDCLVFDTSIAQLFADNGNLGINVTISMC
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgttatatgatagggtgtctacaataacagatcagaaaataacaatgagtgcatttgcc
agcaagagtggccgggtggtaccccctcagtcacccagtcagtctggtgtacctccagga
ggcaatacagacttagctagcctatttgaatgcccagtgtgttttgattatgtattacca
ccaatattacaatgccagagtggtcaccttgtctgtgccaactgccgcccaaaattgaca
tgctgtccaacctgtagaggaccactaggcaatatcagaaatctagccatggagaaggtg
gcatccacagtcatgtttccttgtaagtattcctcgtcaggctgctcagcaaccctcctt
cacacagacaaaacagaacatgaggatacatgtgagttccgtccatacatgtgtccatgt
cctggagcatcctgtaaatggcagggatctttggaacaagttatgccacacctcatgagc
gtccacaaaagtatcacaactctacaaggtgaggatatagttttcttagcaacagatatc
aatttacctggagctgtagattgggtcatgatgcaaagctgttttggtcaccactttatg
ttggttttggagaagcaagaaaaatatgatggacatcaacaattctttgcaatagttcaa
ctaataggatcaagaaagcaagctgaaaactttgcctacagattggagttaaatggactt
cgacgaagactaacttgggaagccacaccacgatcaatacacgaaggtgtgcagtcagcc
atcatgaactctgactgtcttgtctttgacacatccattgcccagttgtttgcagataat
ggtaaccttggaatcaatgtcacaatatccatgtgctga
DBGET
integrated database retrieval system
