Penaeus chinensis (fleshy prawn): 125037339
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Entry
125037339 CDS
T08118
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125037339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125037339
03036 Chromosome and associated proteins [BR:
pchn03036
]
125037339
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125037339
Coactivators
SAGA/TFTC/STAGA complex
125037339
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125037339
STAGA complex
125037339
TFTC complex
125037339
SAGA complex
125037339
SLIK complex
125037339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
125037339
NCBI-ProteinID:
XP_047486386
LinkDB
All DBs
Position
23:13323870..13406779
Genome browser
AA seq
590 aa
AA seq
DB search
MVDRNDNRNDERRCAQIAVESVITWGEAVGVADLPQETARAIAADVTYRLRQTLHVCGQF
LRHCKRRRLTPDDINRALKWMDAPSILGYTGSEPVEWVSVGEVGVHIPHDPTVNLASTAL
SGHIFHQPGSPCVRGEWAYVSGHTMVKGEGESDTVPAPQQLSAEHTQYYKMLFTIIGGSS
NDLFKLMCEDVATSPGITSLVGPIVGGVVRGAQRARQKPHVLRRILLVIRALLVNPHLHL
GPQNYMRDIINVLVYCIIIERKNAQDTQMIRSLASNVLLQVVSRQPGCRGTWETVVTSLG
GVVASSSCPWGQHIGALTGLLILGAPAILHSLTPIARPYHVRLTHAISQSSITTSRDIHD
AHTTSCLLLAGLVKVMSAFVKCLPDSFVVSPPTKNILHTSVKHSSDDFISPGSIGDSDVT
FEQVQEIYKLGEESFGSAFVVQVPGVYLCFSHDHIPSFLNSSVYRDQASTGDALLNPPAT
KKARNITCHSTNKPKPRRNQHVLPTQVFEGYKSLSDRPVNIPMSIQSCREKSVDSLKKKR
NSLPAVNPHPHRALLAHYSSRITGCMPHNTFTRPLHPPLRPGYSLQYLIL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcggaacgataacaggaatgatgaaagacgatgtgcacagatagcagttgaa
agtgttataacatggggtgaagcagtaggtgtcgctgacctcccacaggaaacagcacgt
gcaatcgctgctgatgttacgtataggttaagacaaactttgcatgtgtgtgggcagttt
ctcagacactgcaaacgtcgaaggctgaccccagatgatataaatagagctctcaagtgg
atggatgcaccttccatattagggtatacaggcagtgagcctgtggaatgggtcagtgtt
ggggaggttggtgttcacataccacatgaccctactgtgaatttggcgagcactgctctt
agtggacatattttccaccagccaggcagtccatgtgtcagaggtgagtgggcttatgtg
agtggccataccatggtgaaaggtgagggagaaagtgatactgttccagctccacagcag
ctctcagcagaacatacacagtattataagatgctcttcactatcataggtggatcatca
aatgatctttttaagttgatgtgtgaagatgtagcaacatcaccaggcataacatcattg
gttggtccgattgttggaggagttgtgcgtggtgcgcaacgtgcccggcagaaacctcac
gttcttcgacgtatactgctggtaataagagcactcttagtcaatccacatctacatcta
ggaccacaaaattatatgcgagatatcataaatgtcttggtgtactgtataattattgaa
agaaaaaatgcacaagatactcagatgatcaggagtttggcttcaaatgtgttactccag
gttgtatcaagacagccagggtgtcgtggaacgtgggaaacagtggtgacaagtcttgga
ggagtggtagcaagtagcagctgtccttggggtcaacatataggagctctcacaggtctc
cttatcttaggtgctccagctatattgcacagcttaacaccaattgctcgaccataccat
gtccgcctcactcatgctatctcacaatcctccataacaacatctcgggacattcatgat
gctcatacaacaagttgcctacttctagcaggattagtgaaggttatgtcagcttttgtg
aaatgtcttcctgacagttttgttgtatctccacccacgaagaacatacttcacacttcc
gtaaaacacagcagtgatgactttatatctcctggcagcataggtgatagtgatgtaact
tttgagcaagtgcaggagatatacaagttgggagaagagtcttttggaagtgcctttgtt
gttcaagttcctggtgtttacctttgcttcagccacgatcatataccaagctttcttaat
tcgtctgtgtaccgtgaccaagctagcacaggagatgcactccttaacccaccagccaca
aaaaaagccagaaatataacctgccattctactaataagccaaagccaagaagaaatcaa
catgtacttcctacccaggtatttgaaggttacaagtcactgtcagataggcctgtaaat
attcccatgagtattcaaagctgtcgggaaaaaagtgtggacagccttaagaagaagagg
aattctcttccagcagtaaatcctcatccacaccgtgctctcctggctcactatagttct
cgtatcacaggctgcatgcctcacaatactttcacaagacctttacatccacctcttcga
cctggatattctctgcagtatcttatactttaa
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