Penaeus chinensis (fleshy prawn): 125037607
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Entry
125037607 CDS
T08118
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125037607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125037607
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
125037607
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
125037607
NCBI-ProteinID:
XP_047486764
LinkDB
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Position
23:complement(6224434..6232832)
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AA seq
228 aa
AA seq
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MATQKRGSSTTGWPKNSTQPSYGAKRNGTGSMALNRTISLYPLTNYTFGTKDPLFEKDPS
VPARFQRMREEFDKIGMRRSVEAVLLVHEHGLPHVLLLQLGTTFFKLPGGELNTDEDEVE
GLKRLLTETLGRQDGLKQEWVIEDIIGNWWRPNFEPPQYPYIPSHITKPKEHKKLFLVQL
GEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQSLCRFNFTYM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacagaagcgaggctcgagtaccactggatggccaaaaaactccactcaaccc
tcctacggtgctaaaaggaacggaactggatccatggcgctcaacagaacaattagcttg
tatcctttgacaaattacacatttggcacaaaggatccgttatttgaaaaggaccccagt
gttcctgcccgtttccagcgcatgcgagaggagtttgacaagattggcatgaggaggagt
gtggaagcggtacttcttgtccatgaacatggcctccctcatgtgctactcctgcagctg
ggcacaaccttctttaaattaccgggtggagagctgaatacagatgaagatgaagtggag
ggactcaagcgcttgctgacggaaaccctggggcggcaggatgggctcaagcaggaatgg
gtcatagaggacatcattggtaactggtggcggccaaattttgagcctccacagtaccct
tacatcccctcacacatcaccaagccaaaggaacataaaaagctcttcctcgtacagctt
ggagagaaggcattgtttgcagtaccaaagaactacaagttagtggcagcacccttgttt
gaactctatgacaattctcagggatatggaccgattatttcctctttgccacagtcattg
tgcaggttcaacttcacatatatgtag
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