Penaeus chinensis (fleshy prawn): 125037702
Help
Entry
125037702 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125037702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125037702
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125037702
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125037702
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125037702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
BRCT_3
ECT2_BRCT0
DapB_N
Motif
Other DBs
NCBI-GeneID:
125037702
NCBI-ProteinID:
XP_047486850
LinkDB
All DBs
Position
23:complement(22813869..22843543)
Genome browser
AA seq
1451 aa
AA seq
DB search
MEVTVCSQDGEVSLNFILPEGLTEETCSTSLVCAYQACQENGLNPVWLPSADCVKLSPSK
QDVFVCDPFEGEAFKHLTEGGFKCVRVLGPRCLLTCLHRKEPIPELPSPIHNTAMKGMVV
TTTGFEKDVKAELQMLVERMAGIYSNNFHEGVTHLVANAVGSKKYIVAVEKEIPVMTGEW
VQAVWKAVNRDFREDILATDQQFLSYTCPVFKGLVICVSQMHRKEKDALMKMIQDNGGTY
SGSLEMAVTSVLIIPTPEGDKYTHACNWRIQCLTPDWIYDSVEQGHALDMEGYKVKKTRG
ASTPTNDMSVNGGKNTSRRASLLSVPPDVSMCSTIMNETDALKVTHINETLQMDTSIAVK
KNSAFDEKVNRGIEAVEDLDLQQAMKAGLFLDGCKIFLSGFSGTHIEKLRRILNAGGATR
FNQLTDSVSHVVIGKIVDEHFTTIQSWPSKPHIVYGDWITESIKQKRPADEAQFAHLSDS
SGSSSNSPKPPRRPPRVPVPSQQQENNETYVDEAIINQYLKPGAKLDDTRNVSLNETANM
SALPDSQTTFVQGIFSGKIFTVSGYNEETLEDLITTIQDHGGEVVSHDYKGRVHYTLTNL
DGTGEVHANASEIISHFFIEECLENEGLIDVEYYHMPLLVSRQMNCLEDCTVAISTYKGK
ERLFLVTVANALGARFQEVFAKKDNRAKDIKTSTHLVCPSAEGDKYRAAVKWGVPAITRD
WLIECIHTGEREPEDLYKVDNKNRREVNYKEVIRKLITKGHSDDHSSTVYRVEDTVAGDI
TEVGATPMNNKVRALREQGNVGTPSDIKTPDLETMRRLYPTPGVGKGNETLNDMPTPDTP
YGSTWFPNPSSRVRKGFKRMLDSIPDAPVVKKRTTENGTPMNVLYKKFFSNVQETLDNHE
PKFSERMAANEQRKEERDGGKKERKDSNEEQGGEETMAADTHGPLTGVVVCTARKLQDQQ
RELYKTVAELGGDYRWGYDHSVTHFVYQGRHNDTNKEFRLAREHGKLIVAPEWVHMCRDE
EARIDESLFPHTHNPKMSLSILSAKTTPVSKRGRPKKMPLEETSPDTQERQECEEQDTSH
SNESENESGDTANDEEQKKAAISKQLEEIEALATVTGSGRRSAGNARNRSLGEKLKHTPT
RPIQVEAHPATMEVAESQNTAITWDDPQEREARLHLQNQLTKDTQEIINAREQHDETVYF
EEDEEDKENTPSQEGSADESAVIPHKTKKRTYLIILSGMPEDEKNRYSEIVESLGGLVSQ
EQNHDPRGTHVVTAKPSRSEKHLAAIASGKWMLYVSFLEESVKLGHFVQEEPHEWGNPEA
TYLPLLQPESLEKKLATAAHRWRLAIQDMPAGDDRRGAFCHMRALIHSSLLTRTVTDATH
FFVEANKNPAKFDLAKFAANQVPCLAPVFLNEYLVKDPVPDEMEHCIPEYKEIVASMSKA
DQSLIRRTRKR
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcaccgtttgctcacaggatggagaagtgagtctcaactttatccttcccgag
ggactgacagaggaaacgtgttcgacgagccttgtgtgcgcctaccaggcttgccaagag
aatggattaaacccagtgtggcttccatcagcagactgtgtcaaactttccccctccaag
caagatgttttcgtctgtgatccctttgaaggagaagcttttaagcacttaacagaaggt
ggctttaagtgtgtcagagtcctgggcccacgatgcctcctgacctgcctccatcgcaag
gagcccatccctgagctgccgtcccccatccacaacacagccatgaaggggatggttgtc
acgaccacaggatttgagaaggacgtaaaggccgagctgcagatgttagtggagaggatg
gcgggaatctattccaacaactttcacgagggtgtgacacacctggtggcaaacgctgtg
gggagcaagaagtatattgtggctgtggaaaaggagatcccagtgatgaccggagagtgg
gtgcaggcagtatggaaggctgtaaaccgggatttccgagaagatatccttgccacggat
caacagtttttgtcgtacacctgccctgtcttcaaaggcctggtcatctgtgtgtcccag
atgcaccgcaaggaaaaggatgcccttatgaaaatgattcaggataatggtgggacgtat
tcgggtagcttggagatggctgtgacctcagtcttgatcatcccaaccccagaaggtgat
aagtacactcacgcatgtaactggcgcatccagtgtctcaccccagactggatctacgac
tctgtggaacagggacatgcgcttgacatggagggctataaggtgaagaagacacgtgga
gcttccactcctaccaacgacatgtctgtgaatggcggcaaaaacacctcaaggcgggct
tctttattgtcggttcccccagatgtgtccatgtgcagcaccatcatgaacgagactgat
gccttgaaggttacccatatcaatgagaccttacaaatggacacctccatagctgtcaag
aagaacagtgcctttgatgagaaagtaaatcgtggtatagaagcagtggaggacctggac
ttgcagcaggccatgaaggcaggtctgttcctggacggctgcaagatcttcctctccggc
ttcagtgggacgcacattgagaagcttcgacgcatcctcaatgctggtggggcaacgcgc
ttcaatcagctgacggactcggtgtctcacgttgtcatagggaagattgtagatgagcac
ttcacaacaattcagtcttggccttcgaagccccacatagtttacggcgactggatcaca
gagagcatcaagcagaaacgcccagcagacgaggcacagttcgcccacctttctgatagc
agtggcagcagcagcaactcccccaaaccaccacgaaggcctcctagggtccccgtgcct
tcccaacagcaggagaacaacgagacatacgtggatgaggccatcatcaatcagtaccta
aagccaggagccaaactggatgacacgaggaatgttagtctgaatgagacggctaacatg
tcagctctcccagactcgcagacgacatttgtgcaggggatttttagcggcaagatcttc
accgtctcgggctacaacgaggaaaccctggaggacctgattaccaccatccaggaccac
ggtggggaggtggtatctcacgactacaagggccgcgtccactataccctcaccaacctt
gatgggacaggggaggttcacgccaatgccagtgagattatctcgcacttcttcatcgag
gagtgcttggagaatgagggcctcattgacgtagagtactaccacatgcctctcctagtc
agcagacagatgaactgcttggaagactgcaccgtagccatatcaacgtataagggcaaa
gaacgcctttttctggtcactgttgcaaatgcacttggagcaagattccaagaagtcttt
gccaagaaggacaaccgtgctaaggacattaagacgtcaacacacctcgtatgcccaagt
gccgagggagacaagtaccgggcagctgtcaagtggggggttcctgccatcacacgagac
tggctgattgagtgcatacatactggggagagggagcctgaggacttgtacaaagtggat
aacaagaaccgacgggaggtcaactacaaggaagttatcaggaagttgatcacaaaagga
cactcagatgaccacagcagcacagtgtaccgtgtggaagacactgttgctggggacatt
actgaggtaggagcaacgcccatgaataacaaggtgcgggcattgagggaacagggcaat
gtcggaacaccctcggacatcaagacgccagaccttgaaaccatgagaaggttgtaccca
accccaggagtagggaagggcaacgaaaccttgaacgacatgccaacaccagacactccg
tatggaagcacatggttcccaaacccttcatcccgtgtgaggaaaggcttcaaaaggatg
ctggactccattccggatgcacccgtggtaaagaagcgcaccacagagaatggaacccca
atgaatgttctctataaaaagttcttcagcaatgtccaggagacattagacaaccatgag
ccaaagttctctgagaggatggcagctaatgaacagaggaaggaagaacgtgatggtggc
aagaaagagaggaaagatagcaatgaagaacaagggggagaggagaccatggcagctgac
acccatggccctttgacaggggtggtggtgtgcacagcccgcaagctgcaggatcagcaa
cgtgagctgtacaaaactgtagcggagttaggtggggactaccgctggggctatgaccat
tcagtaacacattttgtgtaccaagggcgccacaatgacactaacaaggaattccgcttg
gcgcgagagcatggcaaattaattgtggcaccagagtgggtccacatgtgccgtgatgag
gaggccaggattgatgagagcttattcccacatacacacaatcccaagatgtccttgtcc
atcttgagtgccaagaccacgccagtgtcgaaacggggcaggcctaagaaaatgccctta
gaggagacatcaccagacacccaggagaggcaggagtgtgaggagcaggacaccagccac
agcaacgagagtgagaacgagagcggcgacacggccaatgatgaagagcagaagaaggca
gcaatctccaagcagctagaggagatcgaggcattggccacagttacggggtcaggcaga
aggagtgcgggtaatgccaggaataggtccctgggcgagaagttgaaacacactcccaca
cgccccattcaagtggaggcacacccagcgaccatggaagtggccgagtctcagaacacg
gccatcacctgggacgacccgcaagagcgagaggccaggctgcacctccagaaccaactc
accaaggacactcaggaaatcatcaacgcaagggagcagcacgatgaaaccgtctacttc
gaagaggacgaggaggacaaggagaacacgcccagccaagaggggtcggctgacgagtcc
gcggtcatcccccacaagaccaagaagaggacgtacctcattatcctctcgggcatgccg
gaggacgagaagaaccgctactcagagatcgtggagagtttgggcggcttggtgagccag
gagcagaaccacgacccgaggggcacccacgtggtcacagccaagccctcgcgctcggag
aagcacctggcagccatcgcgtcggggaagtggatgctgtacgtctccttcttggaggag
tcggtcaagttaggccactttgtgcaggaggaaccccacgaatggggcaacccagaggcc
acctacctgcccctgctccaaccggaaagcctggagaagaagctggccactgcagcccac
agatggcgcctcgccatccaggacatgccggctggggatgatcgcaggggagctttctgc
cacatgagggccctcatccactccagcctccttacaaggactgtgacagacgcgacccat
ttcttcgtggaagccaacaaaaacccggccaagtttgacctggccaagtttgcagccaac
caggtcccttgcttagcccccgtcttcctcaacgagtacctagtcaaggacccggttcct
gatgagatggagcactgcattccagagtacaaggagattgtagcaagtatgagtaaagca
gatcagtctctcattagaagaacaaggaaacggtaa
DBGET
integrated database retrieval system
