Penaeus chinensis (fleshy prawn): 125038078
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Entry
125038078 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin-like
KO
K06766
neogenin
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125038078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pchn04515
]
125038078
Cell adhesion molecules [BR:
pchn04515
]
Immunoglobulin superfamily
DCC/UNC5 family
125038078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
FN3_DSCAM-DSCAML_C
Ig_2
Fn3_VIN3
ig
Pur_ac_phosph_N
V-set
Ig_RIMBP2
C2-set_2
Ig_6
CoV_NSP13_1B
Motif
Other DBs
NCBI-GeneID:
125038078
NCBI-ProteinID:
XP_047487273
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All DBs
Position
24:complement(34309531..34368777)
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AA seq
1422 aa
AA seq
DB search
MEATPQRNGFWKDNYGNWDPSLAQASSSSSSSVSSSSLSVSVSWFKDSQPLEVDSRMTLL
PSGALEIENVVSSDEGEYYCHASSFDKTKVSHTATLRVKAAFALRDPMAPAFIATPPPSL
VARVGDVATLDCAANGYPEPVVVWLKDGATIDMAHLDTRFHFLGTTRSLQITPLKEEDSG
AYMCRAENREDSVDAVAHLEVLVPPRFVHEPTNAVGYEKEDLELECQAYGRPPPPRPLAQ
ECRVDRREQLLPGNYARPTAGPPPLVRWLKNAELIVESNYFQMVNGQNLKILGLVEGDAG
MYQCVASNAAGSAQASAQLRVLKSNIPDSRTHKTTETTEREEEEEDRGIGIGIGVFEETT
GGRGRDEEEEDEDEDEDEGTELLPDQPSSPRRLQAIIASNRFITLAWHEPRINNEHIVGY
SVFYRQEGSLRERVQNVSASSSSEGLDEYKTQIGQLSPGTEYLVRVVAHSSRGGPGLSSR
EVRVSTKPDLDLPPAPQGLRVTPLSPRSLEVVWEGQLPGSPSPPAPPSSSSGLLGPPGLA
GGGEEAKKRKKLEEEEEEKRRRRKEKTPVTGYVMYYMQVGSAEEHEVEVSPTATRHDLEG
LDEFTEYSVWLVAVNANGAGDATREVTARTFSDVPTREPQNVTVEAASSRSLILRWEPPP
PQDQNGVITGYKIRYKERGKAGSTKTKTTDGNRRLFALTDLKRSTQYSIKLSALTVNGSG
PSTHWIPAETFANDLDENRVPDKPTSLRALAMKDHISVKWQPPQMQNVMVRGYTIGWGKG
IPDVYSKIVDSKQRSYVIEGLEPNAEYVISLRAFNSVGETQAPCYEQVRTRPPEPPSAPT
LTPPVGLKAEVLTPFTVALQWTDTTLNRNQVWVGSKIYIETLNSILILHTFITHTPYHTH
THTLTHTMPNSLTSLSLSLFRTGSPRISVEPGDLQHHPPGPPPPPPRDITVVPIPGEPHT
IVFNWQPPKQANGKITGYLIFYTTDANGDWVMEEVKGDRMTFRVHGLTPTTLYYYKMQAR
NVKGFGPLSGVGNFTTMVAGLDRATALPPTPGWFLDQSSLIVLAVAGVGGALTVLGALVG
LAFYCRRNKPMPRHGNLSHRGAGKSGTGLGGSSLGSSGGGGGGGQPELKPPDLWIHHDHH
LEMKNLDKGDDRGGRDGRGGMSSSEPTADSPRTPYQSTYLLVGGSTSSSVYSEGPHSLHR
PGYSLAPFAPPSSVGGLGGLGGVGGGGPPSTSSPAENPYSPNPTSLAAMLGGPSVGGPAL
PPPPPLLGSTLGSNCSQYSSTLPDAGVGGGGGGGGGSGGSSTLGKRSGNPLRSFSVPAPP
QSAPTTPQPKHMVGMRPPGSGVTSPFKKPPLVPPPSGSGGRWGPGGAGGGGGPVRVDALP
EHEEASEALLHGYSTEELSQEMANLEGLMKDLSAITANQFNC
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgactcctcagagaaacggcttttggaaggataattacggaaactgggacccg
agtttagcacaagcctcttcttcttcttcttcttccgtctcctcctcgtccctttccgtc
agcgtctcgtggttcaaggacagtcagccgctggaggtcgactccaggatgactctcctg
ccctcgggagcgttggagattgaaaatgtcgtgtcttccgacgagggcgagtactactgt
catgcgtcaagcttcgacaagaccaaggtgtcacacactgccacgctcagggtcaaagcc
gcctttgccctacgcgaccccatggcaccagccttcatagctacccctccgccgtccctc
gtcgccagggtgggtgacgtggcgactctcgactgtgcagccaatgggtatcctgagccg
gtcgtcgtctggctgaaggacggagccactatcgacatggcgcacctggacacgcgcttc
cacttcctggggacgacgcggagcctgcagatcacgcccctgaaggaggaggactcgggg
gcctacatgtgccgggccgagaacagggaggattccgtcgatgccgtcgcgcatttggag
gtcctggtccccccccgctttgtccacgagcccaccaatgccgtcggctacgagaaggag
gacctggagctcgagtgccaggcctacggcaggccccccccccctcgtccgctggctcaa
gaatgccgagttgatcgtcgagagcaattacttccaggtaattatgccaggcctacggca
ggccccccccccctcgtccgctggctcaagaatgccgagttgatcgtcgagagtaattac
ttccagatggtgaacggccaaaacctcaagatcctcggactggtcgagggggacgctggg
atgtaccaatgcgtggcgtccaatgctgcaggctcggcacaggccagtgcccagcttagg
gtgttgaagtcgaacatccccgacagccgcacgcacaagacgacggaaacgaccgaacgc
gaggaggaagaagaagatagaggaatagggatagggataggagtcttcgaagaaacgacg
ggaggaagaggaagagacgaagaggaagaggacgaggacgaggacgaggacgaagggacg
gaattgctgcccgaccagccgtcctccccgcgtcggctgcaggcaatcatcgccagcaac
cgcttcatcaccctggcctggcatgagccgagaatcaacaacgagcacatcgtcgggtat
tcggtgttctatcggcaggagggctcactcagagaacgcgtccagaacgtgagcgccagt
tcgtccagcgagggcctggacgaatacaagacgcagatcgggcagctgagccccgggacg
gagtacctggttcgcgtggtggcccacagctccaggggcgggcctgggctctccagtcga
gaggtccgagtgagcaccaagcccgacctcgacctcccccccgccccccaaggcctccgc
gtgacccccctgtccccgaggtcgctcgaggtcgtgtgggagggtcagctcccggggagc
ccctcccccccggcccccccttcttcctcgtcgggcctcctagggcccccgggactcgcc
ggggggggagaggaggcaaagaagaggaagaagctggaagaggaggaggaggagaagagg
aggaggaggaaggagaagacgccggtgacgggatacgtgatgtattacatgcaggtcggg
tcagcggaagagcacgaggtcgaggtcagcccgacggcgacccgacacgacctcgaaggc
ctcgacgagttcaccgagtacagcgtctggctcgtggcggtcaatgccaacggggccggc
gacgcgacgcgggaggtcacggcaaggacattctcggacgtgccgacgagggagcctcag
aacgtgacggtggaggcggccagttctaggagcctcatcctgcgctgggagcccccgccg
ccccaggaccaaaacggggtcatcaccggctacaagataaggtacaaggaacgcgggaag
gccggctcgaccaagaccaagacgaccgacggcaatcgcaggctctttgccctgacggat
ctgaagaggagtacgcagtattccattaagctctctgccctgacggtcaacggctccggc
ccgtcgacccactggatcccagccgagaccttcgccaatgacctcgacgaaaaccgcgtc
cccgacaagccgactagccttagagcattggccatgaaggaccacatcagcgtgaagtgg
cagcctccgcagatgcagaacgtgatggtgcggggctacaccatcggctggggcaagggc
atccccgacgtttattccaagatcgtcgacagcaagcagaggagctacgtcattgaagga
ttagaacccaacgccgagtacgtcatcagcctgcgagccttcaacagcgtgggggaaacg
caagccccgtgctacgagcaggtccgaacgcgtcctcctgagcccccttccgcccccacc
ctcaccccccctgtgggcctgaaggcggaggttctcacgcccttcaccgtcgctctgcag
tggacggatacgacgctcaaccgaaaccaggtatgggtcggttctaaaatctacatagag
acactcaactcaatactcatactccataccttcattactcatactccataccatactcat
actcatactcttactcatactatgccgaactctctaacctctctctccctctccctcttc
cgcacagggtcgccgagaatctccgtggagcctggtgacctccaacaccaccctccaggc
ccgccccctccccccccgcgcgacatcaccgtggtccccatccccggggagccccacacc
atcgtcttcaactggcagcccccgaagcaggccaacggcaagatcacaggctacctcatc
ttctacacgaccgacgccaacggagactgggtcatggaggaggtcaagggcgaccgcatg
accttccgcgtgcacggcctgaccccgacgaccctctactactacaagatgcaggcgcgg
aacgtcaagggcttcggacccttgtctggggtcggcaatttcacgacgatggtggcaggc
ctggaccgagcgaccgccctgcccccgacaccaggctggttcctggaccagagcagcctc
atcgtgctggccgtcgcgggtgtcggtggcgcgctgaccgtcctgggggccctcgtgggg
ctcgcgttctactgccgcaggaacaagccgatgcccaggcacggcaatctgtcgcaccgc
ggtgcgggcaaatccggcacgggtctggggggcagcagcctgggcagctcagggggggga
ggaggaggaggccagcccgagctcaaacccccggacttgtggatccatcacgaccaccac
ctcgagatgaagaacttggataaaggggacgacagagggggacgtgacggcaggggtggc
atgtcctcctctgagcccaccgcagacagcccacgtacgccataccagtccacctacctg
ctggtgggcggcagcacctcgagcagcgtctacagcgagggcccccactccctccaccgg
ccgggctactccctggcccctttcgctcccccctcgtccgtcgggggcctggggggcctc
gggggggtggggggtgggggtccgccctccacctcgtcccccgccgagaatccctacagt
cccaatcctaccagtctggctgccatgcttgggggcccctcggtagggggtcccgccctc
ccccccccacccccgctcctcggttccactctggggagtaactgcagtcagtacagctca
accctacccgacgcaggggtagggggaggaggaggaggaggagggggaagtgggggcagt
tccaccctagggaagcggtcggggaatcccctccggtccttcagcgtccccgcccccccg
cagtcggcaccgaccacgccccagccgaagcatatggtgggcatgcgaccccccggcagc
ggagtgacgtcccccttcaagaagccccccctcgtcccccccccctcgggctcagggggg
aggtggggtcccgggggggcgggcggaggagggggtcctgtccgcgtcgacgccctgccg
gagcatgaggaagccagcgaggccctgctccacggatactcgacggaggagctgtcgcag
gagatggccaatctggaggggctcatgaaggacctctcggccattaccgccaatcagttt
aattgctag
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