Penaeus chinensis (fleshy prawn): 125038274
Help
Entry
125038274 CDS
T08118
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125038274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchn03041
]
125038274
03009 Ribosome biogenesis [BR:
pchn03009
]
125038274
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125038274
Spliceosome [BR:
pchn03041
]
Complex A
U1 snRNP components
U1 related factors
125038274
Complex B
125038274
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
Pre-60S particles
Helicases
125038274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125038274
NCBI-ProteinID:
XP_047487678
LinkDB
All DBs
Position
24:complement(22976791..22985870)
Genome browser
AA seq
537 aa
AA seq
DB search
MSYRSSRRSRSRSRSRSRDRGRRDRDDWGRGGGYGGSGGGGRPSLKGRQPGERLRKPKWD
LSRLAPFEKNFYQPTPVVVNRQPYEVEQYRNEKEITLRGKNIPNPIQFFTDYNFPDYVMA
EIRRQGYEAPTPIQAQGWPISLQGRDFVGIAQTGSGKTLGYILPAIVHINHQPYLERGDG
PIALILAPTRELAQQILTVAQDFGSSSKIRSTCVFGGAPKGPQIRDLERGVEICIATPGR
LIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVR
NLAEDFLKEYIQLNVGSLSLAANHNILQIVDVCQEMEKDTKLRQLLNEMAQERAYKTIIF
IETKRKVEDVTRGLRSTGWPAMCIHGDKSQQERDWVLSEFRSGRAPILVATDVAARGLDV
DDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFFTADNCKQAKDLIEVLKEANQVV
NPRLYEIMEMGRGGGGKGRNRWRGRDDDRRGGFGRDRDRSRPSGGRNGYTNGNGYAY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacagaagcagccgcaggtctcgctcccgttctcgttctcgctctcgcgaccgt
ggtcgacgcgatagggatgactggggccgaggtggagggtatggtggcagcggtggaggt
gggaggccgtcgctgaagggaaggcagccgggagaacgcctacggaagccaaagtgggac
ctgtccagacttgcccccttcgagaagaacttttaccagcccacacctgttgttgttaac
cgacagccctatgaagtggaacaatacagaaatgagaaggaaatcacacttagaggaaag
aacattcccaaccccattcagttcttcactgactacaatttcccagactatgtaatggct
gaaatccgtcgacagggctatgaagcacctacacctattcaggcacaaggctggcctatt
tcattacaaggaagggattttgttggtattgcacagactggctcaggaaagaccctgggt
tacattctaccagccatcgttcacatcaatcaccaaccatatttggaacggggagatggc
cctattgcactcattttggctcccacaagagaacttgcccaacagatccttacagttgca
caagattttggttcatcttcaaagatccgctccacgtgtgtgttcggtggtgcacccaaa
ggaccacagattcgtgacttggaacgaggggttgagatctgtattgccacaccaggacgt
ctcattgatttcttagaagcaggaaaaaccaaccttcgccgttgtacatatttagtactt
gatgaagcagaccgcatgctggacatgggctttgaaccacaaatcagaaaaattgtagag
cagattcggcctgaccgacaaactcttatgtggtctgcaacttggcccaaagaggtgagg
aatcttgccgaagatttcttaaaagaatacattcagcttaatgtaggctccctatccctc
gcagccaaccacaacatcctccagatcgtagatgtttgtcaagagatggaaaaagataca
aagctgcgccagttgctcaatgagatggcgcaagagagggcttacaagacaataatcttt
atcgaaacgaagcggaaggtggaggatgttactcgtgggttgaggagtactgggtggcca
gcaatgtgtatccatggagacaaatctcaacaagagagagactgggttttaagtgaattc
cgttcagggagggcaccaattttggtagccacagacgttgctgctcgtgggttagatgtg
gatgatgtgaagttcgtgatcaactacgactacccatcttgctctgaggattacgttcac
cgaattgggcgaactggacgctcagacaagacaggaactgcgtacacattcttcacggca
gacaactgtaagcaggcaaaggatctgatcgaagtgctgaaggaggccaatcaagtggtt
aatccccggttatatgaaatcatggaaatgggacgcggtggtggaggtaaaggccgcaac
cgctggaggggacgtgatgatgacaggaggggcggtttcggacgtgaccgcgaccgcagc
cgtccgagtggcggaaggaacggctacaccaacggaaatggatatgcctactga
DBGET
integrated database retrieval system
