Penaeus chinensis (fleshy prawn): 125038570
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Entry
125038570 CDS
T08118
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03030
DNA replication
pchn03410
Base excision repair
pchn03420
Nucleotide excision repair
pchn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125038570
03410 Base excision repair
125038570
03420 Nucleotide excision repair
125038570
03430 Mismatch repair
125038570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125038570
03036 Chromosome and associated proteins [BR:
pchn03036
]
125038570
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125038570
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125038570
DNA Replication Termination Factors
ELG1-RFC complex
125038570
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125038570
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125038570
Check point factors
HRAD17(Rad24)-RFC complex
125038570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_assoc_2
AAA_16
AAA_24
AAA_22
AAA_30
AAA_11
Mg_chelatase
AAA_19
DUF815
ResIII
SLFN-g3_helicase
RuvB_N
Gp44_lid
AAA_5
DNAX_ATPase_lid
AAA_7
bpMoxR
YqjI_C
AAA_18
AAA_3
HdcB
VipD-like_C
Kinesin
AAA_28
DUF3373
Motif
Other DBs
NCBI-GeneID:
125038570
NCBI-ProteinID:
XP_047488057
LinkDB
All DBs
Position
25:complement(11293606..11302974)
Genome browser
AA seq
339 aa
AA seq
DB search
MHAFLKTGKLAAGGGQAGPSKEKVVKKKAPIPWVEKYRPKTVEEVAYQDEVVSVLKSTLQ
GADLPNLLFYGPPGTGKTSTILAASRQLFGDLFRQRVLELNASDERGIQVVREKVKTFAQ
TSVSSTRPDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKQSKTTRFCLICNYVSRIIE
PLTSRCSKFRFKPLAQGILLKRLTYICEEENVKYEDSVLETLIGTSEGDLRRAITTLQSA
ARLRSGEPISTEDIYEITGVVPDKWLTELMEVCATNSYEKLSDFVNLMMAEGYSATQILN
QIHDIIMTNDQLNDIQKAAVYERLAVSLTAVCLIMVLDM
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctttcttgaagaccggtaaacttgcagcaggaggtgggcaggcaggaccgagc
aaagagaaagtagtgaagaagaaagcaccaattccatgggttgaaaaatatcgaccaaag
acagtagaagaagtagcttatcaagatgaggttgtgtctgtcctaaaaagcactttacaa
ggagctgatctgccaaatttgttgttctatggtccaccaggtacaggtaaaacttcaaca
atcctagctgcttccagacagttgtttggtgatctattccgacaaagagtattggagctt
aatgcttcagatgagagaggcattcaggttgtcagagagaaagtaaagacctttgcccag
accagtgtatctagcacaagacccgatggcaaaccctgtcctcctttcaagatcattatc
ctagatgaggctgactcaatgactaatgcagctcaagcagccctcaggcggacgatggaa
aaacagtctaagacaactagattctgtcttatctgtaattatgtatcgcgtattattgag
ccgctgacatccaggtgctccaagtttcgctttaaaccacttgcacaagggatcctactg
aaaaggcttacctatatctgtgaagaggaaaatgttaagtacgaagattctgtcctggaa
accttgatagggacaagtgaaggtgatttacgacgagccattaccacgctgcaatcagct
gcaagattgaggtcaggcgaaccgatatctacagaagatatctatgagataacaggggtt
gtcccagacaagtggcttacagagttgatggaagtatgtgctacaaactcatatgagaaa
ctgagtgactttgtaaacctcatgatggcagagggatattctgcaacacaaatactcaac
caaatacatgatatcataatgaccaacgaccagctcaatgacattcagaaggctgcagta
tatgagaggctagcagtaagtttaacagctgtttgtttgattatggtattagatatgtaa
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