KEGG   Penaeus chinensis (fleshy prawn): 125038887
Entry
125038887         CDS       T08118                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125038887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125038887
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125038887
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 LIG3_BRCT PTCB-BRCT RTT107_BRCT_5 K_channel_TID Na_K-ATPase
Other DBs
NCBI-GeneID: 125038887
NCBI-ProteinID: XP_047488475
LinkDB
Position
26:13903785..13930487
AA seq 786 aa
MPTIKFSEVLSFTSEDPNHPADNLLRQETHRKWKCAAGLSEKQASVTLKLERLTSIRSID
LGNAGSAFVEVLAAREDANFKVLLVASSFMTPIESRNASDLHRVRMFGPDKLNKDVASEK
WDRIKVVCTQPFNKNLQYGLSFVTVSSAGEQEAAPTTPKAVKLGSFTLKEEDESDPISIG
SVFARRREKEASSSPLSGAAAIRAASAAAATTSTAMGGGGGGVSSPGPGSLKRKALENSP
DVGFYQLKKKPAHETTESRNKERDRPKLEREGSSTERRNTAERKEEKEKKKINERERGGG
ESSSSRKNSDRRKEEEETDKDGGETKRETHKKKREGSTGGERKREKENLPTTSQKNQRKT
EPFASLMKDVVFVMSGYQNPQRSNLRDMMLDMGAKYKQDWEPSCSHLICAFTNTPKFLQV
KGKGKIVTAKWITDCHKNKIRYPWRRYQLERGRNADESEDEVWAEELLPREERRAKSPGQ
KRRPSAADAADTDSYNMATDNESEEDTDDEIQRVLAKKKTSEREKESVKLQRMDSAERKD
KNGEKKEPVPRKERETEREEEVECRREEEQQVKTANGKLRGEVGAKRAKVETSGDEPKKT
VNGRKEGAGKEREASSLSIAEGWEKRKRGKQGEKGGKTVERKEAEANGFAKGGKRKQEED
ETEDYDADTDVDEDNKKYLQPPDTSALPLPSLGDHFTGKTFFIYGGMDERSKKMVRRYVI
AFNGTLEEYMTGEVQYVVTEDEWDENFDAALDENSSLQFVKPTWIWQCSNKEKLVPHQPY
LVVPRE
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgcccactatcaagttttccgaggttttgtccttcaccagcgaggatcccaatcacccc
gcagataacctcctgaggcaggaaacacatcggaaatggaagtgcgcagcaggattatca
gagaaacaagcatcagtcaccttgaagttggagcggcttacgtccattcgttccattgac
ctcggcaatgctgggtcagcatttgtggaggttctggcagcacgggaagatgccaacttt
aaggtcctccttgtggcctcctcgttcatgaccccgatagagtccagaaatgcatcagat
ctccacagagtgcgcatgtttgggcctgacaaactgaacaaagacgtggccagtgagaag
tgggaccgcatcaaggtggtgtgcacgcagcctttcaacaagaacctgcagtatgggctc
tcctttgtcacagtttcatctgctggcgagcaggaggcagcccccacaactccaaaggca
gttaagcttgggagttttaccctaaaggaggaagatgagtctgaccccatatccattggg
tccgtcttcgcacgcagaagggagaaggaggcttcatcctcccctctctcaggtgcagct
gcaatcagagctgcctcggccgcagcagcaacaacctcaacagcaatgggaggaggaggg
gggggagtaagtagccctggaccggggagcctaaagagaaaagccctggaaaactcgccc
gatgtaggcttctaccaactgaagaagaagcccgcacatgaaacaacagaaagcagaaac
aaagaacgtgacagaccaaaactggagagggaagggagcagcacagagaggaggaataca
gcagagagaaaggaggaaaaggaaaagaagaagattaacgagagagagagaggagggggc
gaaagcagtagcagtagaaagaacagcgaccgaagaaaggaggaagaggaaacagataaa
gatggaggggagacaaaaagggagacccacaagaagaagcgagaaggaagcacaggggga
gaaagaaagagggagaaagagaatctcccaacaacgtctcaaaagaaccagaggaagacc
gagccgtttgcgtccctaatgaaggacgtagtgtttgttatgagcggctaccagaaccca
cagaggtctaacctgcgcgacatgatgctagatatgggggcaaagtacaagcaggattgg
gagccctcttgctcgcacctcatatgtgctttcaccaacacacccaaattccttcaggtg
aaaggcaagggaaagattgtgacggccaaatggatcaccgattgccacaagaacaagata
cgttacccatggagaaggtaccagctggagcgcgggcgtaatgcagacgagagtgaagac
gaggtttgggctgaagaactcttgcccagggaggagcgtcgtgccaagtctcctggccag
aaacgccgaccttcagctgcagatgctgctgacactgacagttacaacatggcaacagac
aatgaaagtgaagaagacacagatgatgaaatacaaagagtactggctaaaaagaagaca
agtgaaagagagaaagaatcagtgaaacttcagcgaatggactcggcagagaggaaagac
aagaatggagagaagaaggagccagttccaagaaaagaaagagaaacagaaagagaagaa
gaggtggaatgcagaagagaggaagagcagcaggtgaaaacagccaatgggaagctccga
ggggaagttggagcaaaaagggccaaggtggagacttcaggggatgaacccaagaagacg
gtcaatggacggaaggaaggagctggtaaggagcgtgaggcgtcatccttgtccatagca
gaaggctgggaaaagcggaaaagagggaagcagggggaaaagggaggaaagacagtggaa
aggaaggaagcggaagcaaacggctttgcaaaagggggcaagagaaagcaggaggaagac
gagacggaggactatgatgctgacacagatgtagatgaggacaataagaagtatctgcaa
cctcccgatacctcagccctacccctcccctccctgggtgaccacttcactggcaagacc
ttcttcatctacggcgggatggacgaacgcagcaagaagatggtgcggagatatgtcatc
gcttttaatgggacactggaggagtacatgactggagaagtgcagtatgtagtcaccgag
gacgagtgggatgagaactttgatgccgccctggacgagaactcgagtctgcagtttgtg
aagccgacatggatctggcagtgcagcaacaaggaaaagttggtccctcatcagccgtac
ctggtggtgcccagggagtga

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