Penaeus chinensis (fleshy prawn): 125039294
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Entry
125039294 CDS
T08118
Name
(RefSeq) extracellular matrix protein 3-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125039294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pchn04091
]
125039294
Lectins [BR:
pchn04091
]
C-Type lectins
Lecticans
125039294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
DSPc
Motif
Other DBs
NCBI-GeneID:
125039294
NCBI-ProteinID:
XP_047489088
LinkDB
All DBs
Position
27:9986650..9995222
Genome browser
AA seq
1933 aa
AA seq
DB search
MFVAAAVTSAWAGRVSAQGSYSYAEDYSGDYGDYESRDSYLYEDYGEYGDEYGDNALWDD
EHKTSHDGATLYGTRTTQYDTKTTLVSSGHSPFHSTSSLYPESTLAPSTPSSTYYKTSYS
TLSYSETGVTPYPRTHVPVQSSGYDSQLPVYDPLPGNAPNSPLFPALTDEFGDSQPSFGD
VGVLYGGSVIPAKPDDSLLGALPDDADFDPTRSDVPPTDANELVPPARGDADLFGKTDDD
YYYEGRFSVGTAESAYNEQDFLEEKDIILVNRRLDVPFGRVKYLNSETDLKIKVGEGHRC
RVTVIENEPITQRPGMLAPSNFSCDFSLHEVHYTHLGGRYPSSDTIKLLLRYDTRQDTFI
IPFTMNVKVLYDMQLEVVTLNMPLNVDQLFGTSNDIDRSNTMFAYDETRHECKITLLHRH
SDLPRYGVVITDEGDTPSGYMVPCQQFLESGVRYRHTVVPSTRLDYFPAVAELYDITSMT
LHKQEYFQFPVRLRAGKANTPPSVSYESLLLMDVNQFVLTALTPSIVTILDEETALERLI
FNVTKPLGYGEGMLVSTDDQNLAVSSFYQRDIRDMKIAYKPPAEDSNAKRTFEVEFEVLD
DEGLASQPFRMMIIVNPKKTRAPLTMKNAGLELFEGQSRRLSSTKNLEIADEDNLEDVSL
TVMGGLKHGRLLLMGAPTKIFSPADLDTGAVVYEHDDSETYTDNLLLRMSDKDHEVEFLF
PITIFPEDDQPPIAHVNTGFQVKKGELKEITPFLLSATDVDSDDSSITYLLQDPLPAFGV
LILRRPSIPPNPENWQYLNNFYEKRASSWTQRDITDGFLYYRHLGEHRTVSVMDRIFFTL
ADKNEPPNESEIMEVAVKVLPVDDIPPELHSGCSLSLMVDEHKTTVLTKSSLQYIDVDSK
NKNLVYHIQPLRNVDVNDRMSPGNIVLTESSEIVVTTFSQAQINHHKISYKPPAQELGIV
PRIIQFEFEVQDEAGNILPGQTFTIFLTPVDNQPPEVLNSGIRGVQERSEVVITTRILDV
MDPDTDVDNIIFRVSQVPLHGSLMYDALEMAPGNEFTRRDIIDMLIKYVNSGKGEMDNDS
FKIDVTDGVHTIPVTVFIDIEPIDDEPPRLLELLPGRFGAMVRVKEGQDALITTKVLKAT
DPDSEFIRLTYIIHEAPKYGRILLSGVATSSFTQMAIEKSEVLYRHEGGDIGKSAIMDNF
TLILSDMSDEYTYGGNRVDQVMVNVTIEPIDNIAPEVFVDLPITVNESSRAPITVDHIKI
SDADTDDEKVSCTITRQPSSGYVENTSPAPGHESSRKGIPVTSFNLKDILEENINYVQSV
YTRVEPREDNFAFHCTDGINRSPDVTVFVQIEPYNDEVPELFIKELIVMEGMDLIIDSPI
LVATDSDEPKDKLTLKISREPHHGHVMQQSSTGMHPISEFTIDDLNIESKIVYSHDNSET
LQDDFEIELSDGNPGHVVRKEVKVKVLPEDDEAPRLTLNTGLEVDPREAVLITDVELMAE
DLDSDNKNITFVIRKAPRFGHLERLSHSTLTPLQNLSFGMNFTQREIDDGVIQYRHTGIA
GVRDMLKFDLTDGKNVNMDRTFYIEVEGEDNIHPDVVNKGVELPEGGRVVLTTDALSTSD
LNSNDEYLNFTITRAPSRGHLEVSDTPGFPITSFTQLQLAGNKVSYVHHTLDEVKMDSFE
FVVTDGHNAVYRTFRISISDVDNKLPVLFVGELRVREGGSKLITPFELKLEDRDTQSSSL
KFTLTRVPLHGKVLHNNTRATRHFTQSDLEAYLITYHHDGSETLQDDLHFVVTDGTHAEF
YVYPNTERTTRNQQRLAILIEPVDNGVPKLSVNKGATHLYPIEDSKGSGLGFVFSARVLH
VEDRDSLPEALTYRVEDPPRHGRLVAEGSRNDSVEFFTQLNTEKEINNWRRPFCDRSVAE
LPGIPDAKAFSYS
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggcggcggcggtgacgagtgcctgggcgggccgggtgagtgcccagggtagt
tactcgtacgcggaggattacagtggggattacggggattacgaaagccgggatagctac
ttgtatgaggattacggcgagtatggtgatgagtatggtgacaacgccctctgggacgac
gagcacaagacctctcatgatggggcgactctgtacggtacaagaacgacacagtacgac
acgaaaacgactttggtcagctcggggcactcgccgtttcattctacatcatcactgtac
ccggaaagtacactggcaccatcgacgccgtcgtccacgtattacaagacctcctactcg
accttgtcctactcggagacgggtgtgacgccttaccctcgcacccatgtgcccgtgcaa
tcctcaggatacgactcccaactgccagtgtacgacccattgccaggaaacgcgccgaac
agccctctctttccggcgctcacggacgaatttggcgactctcagccaagctttggcgac
gtcggagtcctgtacggcgggagtgtcatccctgcaaagcccgacgacagcctcctcggc
gctctccccgacgacgccgacttcgaccccacgaggagcgacgtccctccgaccgacgcc
aacgaactcgtccctcctgcaaggggcgacgccgatcttttcggaaagacggatgacgat
tactactacgaaggtcggttttccgtcgggacggccgagtctgcctacaacgagcaggat
ttcctggaggagaaggacatcatcctcgtgaacaggcgactcgatgttccattcgggcga
gtcaagtacctgaattccgagactgacctcaaaatcaaggttggcgaaggtcatcggtgt
cgagtgacggtgattgaaaacgagcccatcacgcaacgacccggcatgctggctccttct
aacttcagctgcgatttcagtctccacgaagttcactacacacacctgggcggacgctat
ccttcctcggataccatcaaactccttctccgttatgatactcggcaggacaccttcata
attcccttcaccatgaatgtgaaggtcctgtacgacatgcagctggaggtggtgacgctc
aacatgcccctgaacgtagatcagctgttcgggacgagcaacgacatcgacagaagcaac
accatgtttgcctacgacgagacccgccacgagtgcaagatcacgctgcttcacaggcac
tctgacctccccaggtatggtgtcgttattaccgacgaaggtgacactccctcaggctac
atggtaccgtgtcagcagttcctggagtctggggtcaggtaccgacacacggtagtgccc
tccacgaggctagactactttcccgccgtggctgaactctacgacatcacctccatgact
ctccataagcaagagtacttccagtttccagtccggctccgcgctgggaaggccaacacg
ccaccgtctgtttcctacgagtctcttctcctgatggatgttaaccagtttgtgctgacc
gctcttacaccctcgattgtaactattcttgatgaagaaaccgctttagaaagacttatt
ttcaacgtgacgaaaccactagggtacggcgagggcatgctcgtgagtaccgacgatcag
aacttggccgtgtcttccttctatcaacgggacatccgggacatgaagatcgcatacaaa
ccgccggctgaggactcgaatgcaaagaggactttcgaggtggagtttgaggtcctggac
gacgaaggactggcctcacagcccttcagaatgatgatcattgtgaaccccaagaagact
agggcgccactcactatgaagaacgcagggctcgagctctttgaaggccagtctcgacgc
ttaagctcgacgaagaacttggagatcgctgacgaagataacctcgaagacgtgtccctg
accgtcatgggcgggctgaaacacgggcgactgctcctgatgggggcgccgacgaagatc
ttctctccagccgacttagacacgggtgcagtagtgtacgaacatgacgacagcgagaca
tacacggataaccttctcttgaggatgagtgataaggaccacgaggttgagttcctcttc
cccatcacaattttccccgaggatgaccagccccccattgcccatgtcaacaccggtttc
caagtcaagaaaggagaattaaaggaaatcacacctttcctcctcagtgccacagacgtc
gacagtgacgactctagcatcacttacctcctgcaggatcctctacctgcattcggggtt
ctgatcctacgtcgcccgagcatcccgcccaacccggagaattggcagtacctcaataac
ttttacgagaaacgggcgtcatcttggacacagagagacataactgatggctttctctac
taccgccatcttggcgaacatcgaacggtttccgtgatggatagaatctttttcacactt
gctgataaaaacgaaccccccaacgagtcagagataatggaagtggctgtcaaggtcttg
ccagttgacgacatcccacctgagctgcacagtggttgctctctgtccttgatggtcgat
gagcacaagacgaccgtcctcacaaaatcgagtcttcagtacatcgacgtcgattccaag
aataagaatctcgtgtatcatatccagcctttgcgtaatgtagacgttaatgaccgcatg
tcacctggaaacatcgtcttaacagagtcgtcagaaattgtcgtgacgactttttcgcaa
gcacagatcaatcaccacaagatttcgtacaaaccccccgcgcaagaacttggcatagtt
cctagaatcatccagttcgagttcgaggttcaggacgaggccggaaacatccttcctgga
cagacgttcaccattttcctcacacccgtggacaaccagccgcccgaggtccttaacagc
ggaattcggggcgtacaggagcgcagcgaagtggtcattacgactcgaatcctcgacgtg
atggatccggacacagacgtcgacaacataatcttccgggtgagtcaagtccccctccac
ggcagcctcatgtacgacgcactcgaaatggcaccgggaaatgagttcacgcgacgagac
atcattgacatgttgattaagtatgtcaacagtggcaagggcgagatggacaatgacagt
ttcaaaatcgacgttaccgatggcgttcacacaataccagtgacggtcttcatcgacatc
gagccaatcgacgacgaacctccgcgtctcttggagcttttacccggaagattcggggcg
atggtgagggtgaaggagggtcaagacgcgctcatcaccacgaaggttctcaaagccacg
gatccagactcggaattcattcgtttgacttacattatccacgaagcaccaaagtatggg
aggattttgctcagtggtgtggccacgtccagcttcactcaaatggcgatagagaagagc
gaggtcttgtatcgtcacgaaggaggcgacattggaaagtcggccatcatggataatttt
acgctcattctttctgacatgtccgacgagtacacttacggcgggaaccgcgtcgatcag
gtgatggtcaacgtaacgattgagccgattgataatatcgcccccgaagtgtttgtcgat
ctccctatcaccgtcaacgagtcctcccgggcgccgattacagtcgatcacatcaagatc
agcgacgccgacaccgacgacgagaaggtgagctgtaccatcacccgtcagccgtccagt
ggctacgtggagaacacctcgccagcgcccggacacgaaagctcaaggaagggaatccct
gtcacttcgttcaacctgaaagacattttagaagagaatataaattacgttcagagcgtt
tataccagagtggagcctcgtgaagataactttgctttccactgcacggacggaatcaac
agatctcccgacgtgactgtcttcgttcaaatcgagccttacaacgacgaagtgcccgaa
ctcttcataaaggagcttatcgtcatggagggcatggacttgataatcgattctcccatt
ctggtggccactgacagcgatgaaccgaaggataagttgaccttgaagatttctcgagaa
cctcaccatggccacgtcatgcagcaaagctcaacaggaatgcatccgatcagcgagttc
accatcgacgacctaaacatcgagtctaagatcgtatattcccacgacaacagcgagaca
ctgcaggacgattttgagatcgaactctccgacggaaatccaggtcatgtcgtgagaaaa
gaggtgaaagtgaaggtcttgcccgaggacgacgaggccccgagactcaccctcaacacc
gggttggaagtcgaccctcgagaggcggtcttgatcacggacgtggaactcatggcggag
gatttagactcagacaacaagaacatcaccttcgtcatcaggaaggctccgaggttcggg
catctggaacgcctgagccacagcacgctcacgcccttgcagaacctgtccttcggaatg
aacttcacgcagcgagaaatcgacgacggcgtcatccaataccgacacacgggcatcgcc
ggcgtgagagacatgctcaaattcgacctaacggacggcaaaaacgtgaacatggacagg
accttctacatcgaggtggagggcgaggacaacatccatcccgacgtcgtgaacaagggc
gtggagcttcctgaaggagggagagtcgtgctgactaccgacgccctcagcacaagcgac
cttaacagcaatgacgaatacctaaatttcacgatcacgagagctccatcgcgcggccat
ctcgaagtttcagacacgccgggcttcccgatcacaagcttcactcagcttcagctcgcc
gggaacaaagtttcctatgtgcaccataccctggacgaagtcaagatggattcctttgag
ttcgtggtcaccgacggccacaacgccgtgtacaggaccttccgcatttcgatcagcgac
gtggacaacaagctccccgtcctcttcgtgggcgaactcagagttcgagagggtgggtca
aagctcatcacgccgttcgaactcaagctcgaagaccgcgacacccagtcctcgtcgctg
aagttcaccctcacccgtgtgccactccacggcaaggtcttgcacaacaacacgagggcg
acgagacacttcacgcagtcggatctcgaggcctacctcatcacgtaccaccacgacgga
tccgaaacgctgcaggacgacctgcacttcgtcgttacagacgggacgcacgccgagttc
tacgtgtatccgaacaccgagcgcaccacacgaaaccagcagcgcctcgccattctaata
gaacctgttgacaacggcgtcccgaagctctccgtaaataaaggggcgactcacctctat
cccatcgaggacagcaaaggatccggtctaggatttgtgttttcggcgcgcgtcctgcac
gtagaggaccgagattcgcttccagaggcgctcacgtatcgcgtcgaggaccctccgcgg
cacgggcgcctcgtcgccgaaggcagccgcaacgactccgtagagttcttcacacaactc
aacacagaaaaagaaatcaacaactggcgtcgacctttttgcgaccgaagtgttgccgag
ttacctggaattcctgatgcaaaggcgttctcatattcataa
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integrated database retrieval system
